RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 TIMM29Q9BSF4 260 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 NDC1Q9BTX1 674 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 SLC13A1Q9BZW2 595 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 ROPN1BQ9BZX4 212 aaPredicted RBP5.61□□□□□ -1.51
SCAF11-213ENST00000550629 OR2AG1Q9H205 316 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 CCDC68Q9H2F9 335 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 RHOJQ9H4E5 214 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 ZNF768Q9H5H4 540 aaKnown RBP5.61□□□□□ -1.51
SCAF11-213ENST00000550629 FAM96AQ9H5X1 160 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 ROPN1Q9HAT0 212 aaPredicted RBP5.61□□□□□ -1.51
SCAF11-213ENST00000550629 POPDC3Q9HBV1 291 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 FGF22Q9HCT0 170 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 TMEM74BQ9NUR3 256 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 ATXN10Q9UBB4 475 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 KLQ9UEF7 1012 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 GMEB2Q9UKD1 530 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 CA5BQ9Y2D0 317 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 PRKAB1Q9Y478 270 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 PSAT1Q9Y617 370 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 IKBKGQ9Y6K9 419 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 SLCO1B1Q9Y6L6 691 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 CSNK1G3Q9Y6M4 447 aa5.61□□□□□ -1.51
SCAF11-213ENST00000550629 WDFY4Q6ZS81 3184 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 FRYLO94915 3013 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 A0A1B0GVT2 93 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 CCDC189A1A4V9 331 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 MGAT4DA6NG13 374 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 CXorf49A8MYA2 514 aaPredicted RBP5.6□□□□□ -1.51
SCAF11-213ENST00000550629 AHRRA9YTQ3 701 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 LIN7AO14910 233 aaPredicted RBP5.6□□□□□ -1.51
SCAF11-213ENST00000550629 SGTAO43765 313 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 OR1I1O60431 355 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 CDH16O75309 829 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 VPS26AO75436 327 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 HAUS5O94927 633 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 CER1O95813 267 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 TNFP01375 233 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 CFIP05156 583 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 APOA4P06727 396 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 INHBAP08476 426 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 ZNF806P0C7X5 589 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 ZNF883P0CG24 379 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 PRSS56P0CW18 603 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 CBSLP0DN79 551 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 PKMP14618 531 aaKnown RBP5.6□□□□□ -1.51
SCAF11-213ENST00000550629 TGM1P22735 817 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 GABRB3P28472 473 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 ADSLP30566 484 aaPredicted RBP5.6□□□□□ -1.51
SCAF11-213ENST00000550629 APOBEC3AP31941 199 aaPredicted RBP5.6□□□□□ -1.51
SCAF11-213ENST00000550629 CRHR1P34998 444 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 CA5AP35218 305 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 CBSP35520 551 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 SLC26A3P40879 764 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 MSH2P43246 934 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 MAPK9P45984 424 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 LIMK2P53671 638 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 MPP1Q00013 466 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 SRSF2Q01130 221 aaKnown RBP5.6□□□□□ -1.51
SCAF11-213ENST00000550629 BNC1Q01954 994 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 ILF3Q12906 894 aaKnown RBP eCLIP5.6□□□□□ -1.51
SCAF11-213ENST00000550629 GRIK2Q13002 908 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 EIF2B5Q13144 721 aaKnown RBP5.6□□□□□ -1.51
SCAF11-213ENST00000550629 SLC14A1Q13336 389 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 TMED2Q15363 201 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 ELOCQ15369 112 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 ADRM1Q16186 407 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 KIF19Q2TAC6 998 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 MST1LQ2TV78 715 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 TTLL9Q3SXZ7 439 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 ZNF658BQ4V348 819 aaPredicted RBP5.6□□□□□ -1.51
SCAF11-213ENST00000550629 TPRG1LQ5T0D9 272 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 AGAP9Q5VTM2 703 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 PTRHD1Q6GMV3 140 aaKnown RBP5.6□□□□□ -1.51
SCAF11-213ENST00000550629 LRRC8EQ6NSJ5 796 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 FAM45BPQ6NSW5 357 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 UGT3A1Q6NUS8 523 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 DOK6Q6PKX4 331 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 LVRNQ6Q4G3 990 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 TMEM220Q6QAJ8 160 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 ENPP7Q6UWV6 458 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 LRIG3Q6UXM1 1119 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 WASH2PQ6VEQ5 465 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 C11orf96Q7Z7L8 435 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 LDB1Q86U70 411 aaPredicted RBP5.6□□□□□ -1.51
SCAF11-213ENST00000550629 TRIM74Q86UV6 250 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 LCA5Q86VQ0 697 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 AMZ2Q86W34 360 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 SPATS2Q86XZ4 545 aaKnown RBP5.6□□□□□ -1.51
SCAF11-213ENST00000550629 TRAPPC5Q8IUR0 188 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 ZNF547Q8IVP9 402 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 CTAGE3PQ8IX95 158 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 RIBC1Q8N443 379 aaPredicted RBP5.6□□□□□ -1.51
SCAF11-213ENST00000550629 PPM1NQ8N819 430 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 AVL9Q8NBF6 648 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 GPR156Q8NFN8 814 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 OR2L2Q8NH16 312 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 FAM45AQ8TCE6 357 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 HM13Q8TCT9 377 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 DCAKDQ8WVC6 231 aa5.6□□□□□ -1.51
SCAF11-213ENST00000550629 ASZ1Q8WWH4 475 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms