RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 PSMB5P28074 263 aa12.84□□□□□ -0.35
NUP188-211ENST00000550219 CRABP2P29373 138 aa12.84□□□□□ -0.35
NUP188-211ENST00000550219 GRIA3P42263 894 aa12.84□□□□□ -0.35
NUP188-211ENST00000550219 SERPINB8P50452 374 aa12.84□□□□□ -0.35
NUP188-211ENST00000550219 RAB10P61026 200 aa12.84□□□□□ -0.35
NUP188-211ENST00000550219 MYBPC3Q14896 1274 aa12.84□□□□□ -0.35
NUP188-211ENST00000550219 SF1Q15637 639 aaKnown RBP12.84□□□□□ -0.35
NUP188-211ENST00000550219 KRT71Q3SY84 523 aa12.84□□□□□ -0.35
NUP188-211ENST00000550219 DCAF10Q5QP82 559 aa12.84□□□□□ -0.35
NUP188-211ENST00000550219 UNC5DQ6UXZ4 953 aa12.84□□□□□ -0.35
NUP188-211ENST00000550219 SH2D5Q6ZV89 423 aa12.84□□□□□ -0.35
NUP188-211ENST00000550219 PPP1R32Q7Z5V6 425 aa12.84□□□□□ -0.35
NUP188-211ENST00000550219 CCDC91Q7Z6B0 441 aa12.84□□□□□ -0.35
NUP188-211ENST00000550219 MCATQ8IVS2 390 aaKnown RBP12.84□□□□□ -0.35
NUP188-211ENST00000550219 GALNT16Q8N428 558 aa12.84□□□□□ -0.35
NUP188-211ENST00000550219 OR2L8Q8NGY9 312 aa12.84□□□□□ -0.35
NUP188-211ENST00000550219 CD200R1Q8TD46 325 aa12.84□□□□□ -0.35
NUP188-211ENST00000550219 SSC4DQ8WTU2 575 aa12.84□□□□□ -0.35
NUP188-211ENST00000550219 INPP5DQ92835 1189 aa12.84□□□□□ -0.35
NUP188-211ENST00000550219 TSPAN17Q96FV3 270 aa12.84□□□□□ -0.35
NUP188-211ENST00000550219 PGM2Q96G03 612 aa12.84□□□□□ -0.35
NUP188-211ENST00000550219 PKNOX2Q96KN3 472 aa12.84□□□□□ -0.35
NUP188-211ENST00000550219 GPR21Q99679 349 aa12.84□□□□□ -0.35
NUP188-211ENST00000550219 MENTQ9BUN1 341 aa12.84□□□□□ -0.35
NUP188-211ENST00000550219 CHRNA10Q9GZZ6 450 aa12.84□□□□□ -0.35
NUP188-211ENST00000550219 ILKAPQ9H0C8 392 aaPredicted RBP12.84□□□□□ -0.35
NUP188-211ENST00000550219 CAB39LQ9H9S4 337 aa12.84□□□□□ -0.35
NUP188-211ENST00000550219 INTS7Q9NVH2 962 aaKnown RBP12.84□□□□□ -0.35
NUP188-211ENST00000550219 TBK1Q9UHD2 729 aa12.84□□□□□ -0.35
NUP188-211ENST00000550219 SPTBP11277 2137 aa12.83□□□□□ -0.35
NUP188-211ENST00000550219 EIF3FO00303 357 aaPredicted RBP12.83□□□□□ -0.36
NUP188-211ENST00000550219 SLCO2B1O94956 709 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 IGHEP01854 428 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 UMODP07911 640 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 CD63P08962 238 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 RNF224P0DH78 156 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 STMN1P16949 149 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 ITGA3P26006 1051 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 ATP5DP30049 168 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 GRB7Q14451 532 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 NR6A1Q15406 480 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 EIF2S3LQ2VIR3 472 aaKnown RBP12.83□□□□□ -0.36
NUP188-211ENST00000550219 FCRL6Q6DN72 434 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 MRPL14Q6P1L8 145 aaKnown RBP12.83□□□□□ -0.36
NUP188-211ENST00000550219 TTC23LQ6PF05 361 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 PAQR3Q6TCH7 311 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 TMEM207Q6UWW9 146 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 SHISA6Q6ZSJ9 500 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 OTOAQ7RTW8 1153 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 CMC1Q7Z7K0 106 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 TTC29Q8NA56 475 aaPredicted RBP12.83□□□□□ -0.36
NUP188-211ENST00000550219 PRR7Q8TB68 274 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 ACMSDQ8TDX5 336 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.83□□□□□ -0.36
NUP188-211ENST00000550219 SLC22A18Q96BI1 424 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 PTERQ96BW5 349 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 FAM136AQ96C01 138 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 C19orf60Q96EN9 201 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 SH3GL2Q99962 352 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 SELENOSQ9BQE4 189 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 RAB11FIP5Q9BXF6 653 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 SOX17Q9H6I2 414 aaPredicted RBP12.83□□□□□ -0.36
NUP188-211ENST00000550219 TMBIM4Q9HC24 238 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 SNX15Q9NRS6 342 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 SLC22A11Q9NSA0 550 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 CUTCQ9NTM9 273 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 TRMT6Q9UJA5 497 aaKnown RBP12.83□□□□□ -0.36
NUP188-211ENST00000550219 FBXL4Q9UKA2 621 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 FER1L5A0AVI2 2057 aa12.83□□□□□ -0.36
NUP188-211ENST00000550219 MED13Q9UHV7 2174 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 PHGDHO43175 533 aaKnown RBP12.82□□□□□ -0.36
NUP188-211ENST00000550219 TSPAN12O95859 305 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 C2P06681 752 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 SLC35E2BP0CK96 405 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 ZNF37AP17032 561 aaPredicted RBP12.82□□□□□ -0.36
NUP188-211ENST00000550219 ITGAXP20702 1163 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 SAT1P21673 171 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 TYK2P29597 1187 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 SLC26A3P40879 764 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 PGGT1BP53609 377 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 ARSFP54793 590 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 SLC12A2P55011 1212 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 PDAP1Q13442 181 aaKnown RBP12.82□□□□□ -0.36
NUP188-211ENST00000550219 ZNF460Q14592 562 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 TTLL9Q3SXZ7 439 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 CCSMST1Q4G0I0 132 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 C4orf17Q53FE4 359 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 ZC3H12BQ5HYM0 836 aaKnown RBP12.82□□□□□ -0.36
NUP188-211ENST00000550219 FIGLAQ6QHK4 219 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 CYHR1Q6ZMK1 362 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 NEK10Q6ZWH5 1172 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 TRABD2AQ86V40 505 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 SPNS2Q8IVW8 549 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 RAB42Q8N4Z0 105 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 DTWD1Q8N5C7 304 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 CISD2Q8N5K1 135 aaKnown RBP12.82□□□□□ -0.36
NUP188-211ENST00000550219 TM9SF4Q92544 642 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 PDLIM5Q96HC4 596 aaKnown RBP12.82□□□□□ -0.36
NUP188-211ENST00000550219 UBXN10Q96LJ8 280 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 MIPEPQ99797 713 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms