RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 LNP1A1A4G5 178 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 CCDC162PA2VCL2 907 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 TMEM200CA6NKL6 621 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 SDR42E2A6NKP2 422 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 AP3B1O00203 1094 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 CACNB4O00305 520 aaPredicted RBP6.3□□□□□ -1.4
UBE2N-204ENST00000549833 PPFIA2O75334 1257 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 SLC43A1O75387 559 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 MTX2O75431 263 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 ERN1O75460 977 aaKnown RBP6.3□□□□□ -1.4
UBE2N-204ENST00000549833 SRP72O76094 671 aaKnown RBP6.3□□□□□ -1.4
UBE2N-204ENST00000549833 GPANK1O95872 356 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 GOT2P00505 430 aaKnown RBP6.3□□□□□ -1.4
UBE2N-204ENST00000549833 SBK3P0C264 359 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 BRAFP15056 766 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 ENGP17813 658 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 PSMA3P25788 255 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 TEAD1P28347 426 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 POLD2P49005 469 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 THOP1P52888 689 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 PLTPP55058 493 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 KIAA1024LP59773 190 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 YPEL5P62699 121 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 IL9RQ01113 521 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 CALCOCO2Q13137 446 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 EIF2B5Q13144 721 aaKnown RBP6.3□□□□□ -1.4
UBE2N-204ENST00000549833 FASTKD3Q14CZ7 662 aaKnown RBP6.3□□□□□ -1.4
UBE2N-204ENST00000549833 HLA-BQ31612 363 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 TUBB8Q3ZCM7 444 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 AASDHQ4L235 1098 aaPredicted RBP6.3□□□□□ -1.4
UBE2N-204ENST00000549833 DNAJC21Q5F1R6 531 aaKnown RBP6.3□□□□□ -1.4
UBE2N-204ENST00000549833 ZRANB3Q5FWF4 1079 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 FAM209BQ5JX69 171 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 ENPP7Q6UWV6 458 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 MACC1Q6ZN28 852 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 RD3Q7Z3Z2 195 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 IQCHQ86VS3 1027 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 LIX1LQ8IVB5 337 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 RBFAQ8N0V3 343 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 AMER2Q8N7J2 671 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 BBOF1Q8ND07 529 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 FBXO25Q8TCJ0 367 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 ZNF398Q8TD17 642 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 NAT14Q8WUY8 206 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 IFT81Q8WYA0 676 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 OR1E3Q8WZA6 343 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 ART4Q93070 314 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 GLYATL1Q969I3 302 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 TSACCQ96A04 125 aaPredicted RBP6.3□□□□□ -1.4
UBE2N-204ENST00000549833 RNF31Q96EP0 1072 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 STAMBPL1Q96FJ0 436 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 CFAP36Q96G28 342 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 PDXPQ96GD0 296 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 CDKN2AIPNLQ96HQ2 116 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 COX14Q96I36 57 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 ZSCAN5AQ9BUG6 496 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 TCEAL2Q9H3H9 227 aaPredicted RBP6.3□□□□□ -1.4
UBE2N-204ENST00000549833 GAREM1Q9H706 876 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 MRM3Q9HC36 420 aaKnown RBP6.3□□□□□ -1.4
UBE2N-204ENST00000549833 EPB41L5Q9HCM4 733 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 FGF22Q9HCT0 170 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 MRPL40Q9NQ50 206 aaKnown RBP6.3□□□□□ -1.4
UBE2N-204ENST00000549833 PHPT1Q9NRX4 125 aaPredicted RBP6.3□□□□□ -1.4
UBE2N-204ENST00000549833 RXFP3Q9NSD7 469 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 TREX1Q9NSU2 369 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 IL1RAPL1Q9NZN1 696 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 KCNE5Q9UJ90 142 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 MOSPD1Q9UJG1 213 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 RIMKLBQ9ULI2 386 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 PADI4Q9UM07 663 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 CHMP2BQ9UQN3 213 aa6.3□□□□□ -1.4
UBE2N-204ENST00000549833 PCYT1BQ9Y5K3 369 aaPredicted RBP6.3□□□□□ -1.4
UBE2N-204ENST00000549833 COL27A1Q8IZC6 1860 aaPredicted RBP6.3□□□□□ -1.4
UBE2N-204ENST00000549833 CENPVL1A0A0U1RR11 272 aa6.29□□□□□ -1.4
UBE2N-204ENST00000549833 FAM237BA0A1B0GVD1 139 aa6.29□□□□□ -1.4
UBE2N-204ENST00000549833 ISM1B1AKI9 464 aa6.29□□□□□ -1.4
UBE2N-204ENST00000549833 GOLGA8KD6RF30 607 aa6.29□□□□□ -1.4
UBE2N-204ENST00000549833 GOLGA8TH3BQL2 631 aa6.29□□□□□ -1.4
UBE2N-204ENST00000549833 H7C0S8 307 aa6.29□□□□□ -1.4
UBE2N-204ENST00000549833 F2RL2O00254 374 aa6.29□□□□□ -1.4
UBE2N-204ENST00000549833 TOR1BO14657 336 aa6.29□□□□□ -1.4
UBE2N-204ENST00000549833 NDC80O14777 642 aa6.29□□□□□ -1.4
UBE2N-204ENST00000549833 MAGEC1O60732 1142 aa6.29□□□□□ -1.4
UBE2N-204ENST00000549833 SDC3O75056 442 aa6.29□□□□□ -1.4
UBE2N-204ENST00000549833 LRP3O75074 770 aa6.29□□□□□ -1.4
UBE2N-204ENST00000549833 AGFG2O95081 481 aa6.29□□□□□ -1.4
UBE2N-204ENST00000549833 PRSS23O95084 383 aa6.29□□□□□ -1.4
UBE2N-204ENST00000549833 SLC25A14O95258 325 aaPredicted RBP6.29□□□□□ -1.4
UBE2N-204ENST00000549833 VAPBO95292 243 aa6.29□□□□□ -1.4
UBE2N-204ENST00000549833 PYGLP06737 847 aa6.29□□□□□ -1.4
UBE2N-204ENST00000549833 F7P08709 466 aaPredicted RBP6.29□□□□□ -1.4
UBE2N-204ENST00000549833 HOXC4P09017 264 aaPredicted RBP6.29□□□□□ -1.4
UBE2N-204ENST00000549833 ITGALP20701 1170 aa6.29□□□□□ -1.4
UBE2N-204ENST00000549833 FOXN2P32314 431 aa6.29□□□□□ -1.4
UBE2N-204ENST00000549833 HADHAP40939 763 aa6.29□□□□□ -1.4
UBE2N-204ENST00000549833 ELK3P41970 407 aa6.29□□□□□ -1.4
UBE2N-204ENST00000549833 CARSP49589 748 aaKnown RBP6.29□□□□□ -1.4
UBE2N-204ENST00000549833 DRG2P55039 364 aaKnown RBP6.29□□□□□ -1.4
UBE2N-204ENST00000549833 ARL4CP56559 192 aa6.29□□□□□ -1.4
UBE2N-204ENST00000549833 SRP54P61011 504 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms