RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 EDEM2Q9BV94 578 aa16.71■□□□□ 0.27
LETMD1-220ENST00000549686 SEMA6CQ9H3T2 930 aa16.71■□□□□ 0.27
LETMD1-220ENST00000549686 TMEM9BQ9NQ34 198 aa16.71■□□□□ 0.27
LETMD1-220ENST00000549686 C1GALT1Q9NS00 363 aa16.71■□□□□ 0.27
LETMD1-220ENST00000549686 SEMA4GQ9NTN9 838 aa16.71■□□□□ 0.27
LETMD1-220ENST00000549686 BTRCQ9Y297 605 aa16.71■□□□□ 0.27
LETMD1-220ENST00000549686 CABIN1Q9Y6J0 2220 aa16.7■□□□□ 0.26
LETMD1-220ENST00000549686 TMEM131Q92545 1883 aa16.7■□□□□ 0.26
LETMD1-220ENST00000549686 LY6G6EA0A0G2JKS1 128 aa16.7■□□□□ 0.26
LETMD1-220ENST00000549686 OR2A25A4D2G3 310 aa16.7■□□□□ 0.26
LETMD1-220ENST00000549686 CCDC22O60826 627 aa16.7■□□□□ 0.26
LETMD1-220ENST00000549686 DCTN3O75935 186 aa16.7■□□□□ 0.26
LETMD1-220ENST00000549686 PDYNP01213 254 aa16.7■□□□□ 0.26
LETMD1-220ENST00000549686 JUNP05412 331 aaKnown RBP16.7■□□□□ 0.26
LETMD1-220ENST00000549686 LINC00032P0C843 101 aa16.7■□□□□ 0.26
LETMD1-220ENST00000549686 PCSK2P16519 638 aa16.7■□□□□ 0.26
LETMD1-220ENST00000549686 PRPH2P23942 346 aa16.7■□□□□ 0.26
LETMD1-220ENST00000549686 AHRP35869 848 aa16.7■□□□□ 0.26
LETMD1-220ENST00000549686 PPM1FP49593 454 aaPredicted RBP16.7■□□□□ 0.26
LETMD1-220ENST00000549686 HTR6P50406 440 aa16.7■□□□□ 0.26
LETMD1-220ENST00000549686 OR1D5P58170 312 aa16.7■□□□□ 0.26
LETMD1-220ENST00000549686 RPS15AP62244 130 aaKnown RBP16.7■□□□□ 0.26
LETMD1-220ENST00000549686 DAB2P98082 770 aa16.7■□□□□ 0.26
LETMD1-220ENST00000549686 ABRAXAS2Q15018 415 aa16.7■□□□□ 0.26
LETMD1-220ENST00000549686 SLC9B1Q4ZJI4 515 aa16.7■□□□□ 0.26
LETMD1-220ENST00000549686 TCHHL1Q5QJ38 904 aaPredicted RBP16.7■□□□□ 0.26
LETMD1-220ENST00000549686 VWA5B1Q5TIE3 1220 aa16.7■□□□□ 0.26
LETMD1-220ENST00000549686 WDR74Q6RFH5 385 aaPredicted RBP16.7■□□□□ 0.26
LETMD1-220ENST00000549686 SPRED1Q7Z699 444 aa16.7■□□□□ 0.26
LETMD1-220ENST00000549686 PARP9Q8IXQ6 854 aa16.7■□□□□ 0.26
LETMD1-220ENST00000549686 TUBGCP3Q96CW5 907 aa16.7■□□□□ 0.26
LETMD1-220ENST00000549686 EBF4Q9BQW3 602 aa16.7■□□□□ 0.26
LETMD1-220ENST00000549686 CHRNA10Q9GZZ6 450 aa16.7■□□□□ 0.26
LETMD1-220ENST00000549686 ABCG4Q9H172 646 aa16.7■□□□□ 0.26
LETMD1-220ENST00000549686 U3KQA8 63 aa16.7■□□□□ 0.26
LETMD1-220ENST00000549686 GPR179Q6PRD1 2367 aa16.69■□□□□ 0.26
LETMD1-220ENST00000549686 GOLGA8QA0A0J9YX86 632 aa16.69■□□□□ 0.26
LETMD1-220ENST00000549686 CPED1A4D0V7 1026 aa16.69■□□□□ 0.26
LETMD1-220ENST00000549686 GOLGA8OA6NCC3 632 aa16.69■□□□□ 0.26
LETMD1-220ENST00000549686 TLCD2A6NGC4 264 aa16.69■□□□□ 0.26
LETMD1-220ENST00000549686 ANKDD1BA6NHY2 528 aa16.69■□□□□ 0.26
LETMD1-220ENST00000549686 GOLGA8NF8WBI6 632 aa16.69■□□□□ 0.26
LETMD1-220ENST00000549686 MAP3K7O43318 606 aa16.69■□□□□ 0.26
LETMD1-220ENST00000549686 RSL1D1O76021 490 aaKnown RBP16.69■□□□□ 0.26
LETMD1-220ENST00000549686 PCNAP12004 261 aa16.69■□□□□ 0.26
LETMD1-220ENST00000549686 CDH3P22223 829 aa16.69■□□□□ 0.26
LETMD1-220ENST00000549686 EPHA3P29320 983 aa16.69■□□□□ 0.26
LETMD1-220ENST00000549686 SCTRP47872 440 aa16.69■□□□□ 0.26
LETMD1-220ENST00000549686 SPEM2Q0P670 501 aa16.69■□□□□ 0.26
LETMD1-220ENST00000549686 RBBP5Q15291 538 aaKnown RBP16.69■□□□□ 0.26
LETMD1-220ENST00000549686 SF3A2Q15428 464 aaKnown RBP16.69■□□□□ 0.26
LETMD1-220ENST00000549686 ATP6AP1LQ52LC2 224 aa16.69■□□□□ 0.26
LETMD1-220ENST00000549686 SGO1Q5FBB7 561 aa16.69■□□□□ 0.26
LETMD1-220ENST00000549686 IRGCQ6NXR0 463 aa16.69■□□□□ 0.26
LETMD1-220ENST00000549686 FIGLAQ6QHK4 219 aa16.69■□□□□ 0.26
LETMD1-220ENST00000549686 LARP4Q71RC2 724 aaKnown RBP eCLIP16.69■□□□□ 0.264e-6■■■□□ 17.7
LETMD1-220ENST00000549686 HUS1BQ8NHY5 278 aa16.69■□□□□ 0.26
LETMD1-220ENST00000549686 BAHD1Q8TBE0 780 aaPredicted RBP16.69■□□□□ 0.26
LETMD1-220ENST00000549686 SERPINI1Q99574 410 aa16.69■□□□□ 0.26
LETMD1-220ENST00000549686 WDR55Q9H6Y2 383 aaPredicted RBP16.69■□□□□ 0.26
LETMD1-220ENST00000549686 PRM3Q9NNZ6 103 aa16.69■□□□□ 0.26
LETMD1-220ENST00000549686 CDX4O14627 284 aaPredicted RBP16.68■□□□□ 0.26
LETMD1-220ENST00000549686 CAPN5O15484 640 aaPredicted RBP16.68■□□□□ 0.26
LETMD1-220ENST00000549686 B4GAT1O43505 415 aa16.68■□□□□ 0.26
LETMD1-220ENST00000549686 OR1F1O43749 312 aa16.68■□□□□ 0.26
LETMD1-220ENST00000549686 CLEC3AO75596 197 aa16.68■□□□□ 0.26
LETMD1-220ENST00000549686 LDOC1O95751 146 aaPredicted RBP16.68■□□□□ 0.26
LETMD1-220ENST00000549686 C9P02748 559 aa16.68■□□□□ 0.26
LETMD1-220ENST00000549686 PRR35P0CG20 571 aa16.68■□□□□ 0.26
LETMD1-220ENST00000549686 CKMT2P17540 419 aa16.68■□□□□ 0.26
LETMD1-220ENST00000549686 LBPP18428 481 aa16.68■□□□□ 0.26
LETMD1-220ENST00000549686 MAGP20916 626 aa16.68■□□□□ 0.26
LETMD1-220ENST00000549686 PTX3P26022 381 aaPredicted RBP16.68■□□□□ 0.26
LETMD1-220ENST00000549686 YBX1P67809 324 aaKnown RBP16.68■□□□□ 0.26
LETMD1-220ENST00000549686 SF3A3Q12874 501 aaKnown RBP eCLIP16.68■□□□□ 0.261e-8■□□□□ 9.9
LETMD1-220ENST00000549686 MAD2L1Q13257 205 aaPredicted RBP16.68■□□□□ 0.26
LETMD1-220ENST00000549686 LSM12Q3MHD2 195 aaKnown RBP16.68■□□□□ 0.26
LETMD1-220ENST00000549686 NXNQ6DKJ4 435 aa16.68■□□□□ 0.26
LETMD1-220ENST00000549686 OGFOD2Q6N063 350 aa16.68■□□□□ 0.26
LETMD1-220ENST00000549686 GUSBP11Q6P575 273 aa16.68■□□□□ 0.26
LETMD1-220ENST00000549686 Q6ZSR9 355 aa16.68■□□□□ 0.26
LETMD1-220ENST00000549686 SPATA19Q7Z5L4 167 aa16.68■□□□□ 0.26
LETMD1-220ENST00000549686 TRIM73Q86UV7 250 aa16.68■□□□□ 0.26
LETMD1-220ENST00000549686 MFSD9Q8NBP5 474 aa16.68■□□□□ 0.26
LETMD1-220ENST00000549686 TRPV3Q8NET8 790 aa16.68■□□□□ 0.26
LETMD1-220ENST00000549686 NCSTNQ92542 709 aa16.68■□□□□ 0.26
LETMD1-220ENST00000549686 PPP1R36Q96LQ0 422 aa16.68■□□□□ 0.26
LETMD1-220ENST00000549686 OR52B2Q96RD2 323 aa16.68■□□□□ 0.26
LETMD1-220ENST00000549686 ZMYND15Q9H091 742 aa16.68■□□□□ 0.26
LETMD1-220ENST00000549686 SPNS1Q9H2V7 528 aa16.68■□□□□ 0.26
LETMD1-220ENST00000549686 AKTIPQ9H8T0 292 aa16.68■□□□□ 0.26
LETMD1-220ENST00000549686 DMRT3Q9NQL9 472 aa16.68■□□□□ 0.26
LETMD1-220ENST00000549686 FARSBQ9NSD9 589 aaKnown RBP16.68■□□□□ 0.26
LETMD1-220ENST00000549686 HEY2Q9UBP5 337 aa16.68■□□□□ 0.26
LETMD1-220ENST00000549686 ZFP69BQ9UJL9 534 aa16.68■□□□□ 0.26
LETMD1-220ENST00000549686 TMED5Q9Y3A6 229 aa16.68■□□□□ 0.26
LETMD1-220ENST00000549686 CCL27Q9Y4X3 112 aa16.68■□□□□ 0.26
LETMD1-220ENST00000549686 MN1Q10571 1320 aaPredicted RBP16.68■□□□□ 0.26
LETMD1-220ENST00000549686 PROB1E7EW31 1015 aa16.67■□□□□ 0.26
LETMD1-220ENST00000549686 HAT1O14929 419 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms