RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 C19orf60Q96EN9 201 aa19.28■□□□□ 0.68
CTDSP2-204ENST00000548823 VPS4AQ9UN37 437 aa19.28■□□□□ 0.68
CTDSP2-204ENST00000548823 RP1L1Q8IWN7 2480 aaPredicted RBP19.27■□□□□ 0.68
CTDSP2-204ENST00000548823 CELSR2Q9HCU4 2923 aa19.27■□□□□ 0.68
CTDSP2-204ENST00000548823 NUDT21O43809 227 aaKnown RBP19.27■□□□□ 0.68
CTDSP2-204ENST00000548823 GPC4O75487 556 aa19.27■□□□□ 0.68
CTDSP2-204ENST00000548823 ATP6V1G2O95670 118 aa19.27■□□□□ 0.68
CTDSP2-204ENST00000548823 CPNE6O95741 557 aa19.27■□□□□ 0.68
CTDSP2-204ENST00000548823 TSPAN8P19075 237 aa19.27■□□□□ 0.68
CTDSP2-204ENST00000548823 HTR1BP28222 390 aa19.27■□□□□ 0.68
CTDSP2-204ENST00000548823 SRP54P61011 504 aaKnown RBP19.27■□□□□ 0.68
CTDSP2-204ENST00000548823 SQLEQ14534 574 aa19.27■□□□□ 0.68
CTDSP2-204ENST00000548823 CLEC6AQ6EIG7 209 aa19.27■□□□□ 0.68
CTDSP2-204ENST00000548823 ENPP7Q6UWV6 458 aa19.27■□□□□ 0.68
CTDSP2-204ENST00000548823 TCAIMQ8N3R3 496 aa19.27■□□□□ 0.68
CTDSP2-204ENST00000548823 TEX19Q8NA77 164 aa19.27■□□□□ 0.68
CTDSP2-204ENST00000548823 TWIST2Q8WVJ9 160 aa19.27■□□□□ 0.68
CTDSP2-204ENST00000548823 PMEPA1Q969W9 287 aa19.27■□□□□ 0.68
CTDSP2-204ENST00000548823 SEMA4BQ9NPR2 832 aaPredicted RBP19.27■□□□□ 0.68
CTDSP2-204ENST00000548823 CUEDC1Q9NWM3 386 aaPredicted RBP19.27■□□□□ 0.68
CTDSP2-204ENST00000548823 ADAMTS6Q9UKP5 1117 aa19.27■□□□□ 0.68
CTDSP2-204ENST00000548823 MED13Q9UHV7 2174 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 C2CD3Q4AC94 2353 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 NCF1BA6NI72 391 aaPredicted RBP19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 NCF1CA8MVU1 366 aaPredicted RBP19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 GFYI3L273 518 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 PPP6CO00743 305 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 UBDO15205 165 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 MMP20O60882 483 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 SLCO2B1O94956 709 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 CHEK2O96017 543 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 GSTM1P09488 218 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 PRKAR1AP10644 381 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 NCF1P14598 390 aaPredicted RBP19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 HNRNPH1P31943 449 aaKnown RBP19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 GGT5P36269 586 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 PGM1P36871 562 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 MAPK9P45984 424 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 CPA2P48052 419 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 PRLHRP49683 370 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 GSTM4Q03013 218 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 CDC20Q12834 499 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 SNCBQ16143 134 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 C14orf28Q4W4Y0 310 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 RNF165Q6ZSG1 346 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 GPRIN3Q6ZVF9 776 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 PACS2Q86VP3 889 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 TICAM1Q8IUC6 712 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 PHYKPLQ8IUZ5 450 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 GALNT11Q8NCW6 608 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 MAGEC3Q8TD91 643 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 ASZ1Q8WWH4 475 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 RHBDF1Q96CC6 855 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 DDA1Q9BW61 102 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 TRIM54Q9BYV2 358 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 ZCCHC2Q9C0B9 1178 aaKnown RBP19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 TP53TG5Q9Y2B4 290 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 FIS1Q9Y3D6 152 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 ST14Q9Y5Y6 855 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 B3GALT1Q9Y5Z6 326 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 COPG1Q9Y678 874 aaKnown RBP19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 CRYBG3Q68DQ2 2970 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 FBN2P35556 2912 aa19.26■□□□□ 0.67
CTDSP2-204ENST00000548823 TAPBPO15533 448 aa19.25■□□□□ 0.67
CTDSP2-204ENST00000548823 DUX1O43812 170 aa19.25■□□□□ 0.67
CTDSP2-204ENST00000548823 RAD1O60671 282 aa19.25■□□□□ 0.67
CTDSP2-204ENST00000548823 TNFP01375 233 aa19.25■□□□□ 0.67
CTDSP2-204ENST00000548823 ANXA5P08758 320 aa19.25■□□□□ 0.67
CTDSP2-204ENST00000548823 POU3F2P20265 443 aaPredicted RBP19.25■□□□□ 0.67
CTDSP2-204ENST00000548823 GNLYP22749 145 aa19.25■□□□□ 0.67
CTDSP2-204ENST00000548823 PIK3CGP48736 1102 aa19.25■□□□□ 0.67
CTDSP2-204ENST00000548823 MRPL19P49406 292 aaKnown RBP19.25■□□□□ 0.67
CTDSP2-204ENST00000548823 NFATC4Q14934 902 aa19.25■□□□□ 0.67
CTDSP2-204ENST00000548823 IRF4Q15306 451 aa19.25■□□□□ 0.67
CTDSP2-204ENST00000548823 MAPRE2Q15555 327 aa19.25■□□□□ 0.67
CTDSP2-204ENST00000548823 ZRSR2Q15696 482 aaKnown RBP19.25■□□□□ 0.67
CTDSP2-204ENST00000548823 CLPPQ16740 277 aaPredicted RBP19.25■□□□□ 0.67
CTDSP2-204ENST00000548823 ZNF787Q6DD87 383 aa19.25■□□□□ 0.67
CTDSP2-204ENST00000548823 OGFOD2Q6N063 350 aa19.25■□□□□ 0.67
CTDSP2-204ENST00000548823 SYVN1Q86TM6 617 aa19.25■□□□□ 0.67
CTDSP2-204ENST00000548823 RCBTB1Q8NDN9 531 aa19.25■□□□□ 0.67
CTDSP2-204ENST00000548823 FAM46DQ8NEK8 389 aa19.25■□□□□ 0.67
CTDSP2-204ENST00000548823 ASB11Q8WXH4 323 aa19.25■□□□□ 0.67
CTDSP2-204ENST00000548823 NUS1Q96E22 293 aa19.25■□□□□ 0.67
CTDSP2-204ENST00000548823 PPP1R36Q96LQ0 422 aa19.25■□□□□ 0.67
CTDSP2-204ENST00000548823 EFHD1Q9BUP0 239 aa19.25■□□□□ 0.67
CTDSP2-204ENST00000548823 CD244Q9BZW8 370 aa19.25■□□□□ 0.67
CTDSP2-204ENST00000548823 UTP6Q9NYH9 597 aaKnown RBP19.25■□□□□ 0.67
CTDSP2-204ENST00000548823 KLQ9UEF7 1012 aa19.25■□□□□ 0.67
CTDSP2-204ENST00000548823 A1L4Q6 167 aa19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 B4GAT1O43505 415 aa19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 RECQL5O94762 991 aaPredicted RBP19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 OTCP00480 354 aa19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 AP1S2P56377 157 aa19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 MXRA7P84157 204 aa19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 TMEM115Q12893 351 aaPredicted RBP19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 GTF2H2Q13888 395 aa19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 CYLC2Q14093 348 aaPredicted RBP19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 RBBP7Q16576 425 aa19.24■□□□□ 0.67
CTDSP2-204ENST00000548823 PHKG1Q16816 387 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms