RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 KLHL20Q9Y2M5 609 aa27.64■■■□□ 2.01
BRF1-213ENST00000548421 CD1CP29017 333 aa27.63■■■□□ 2.01
BRF1-213ENST00000548421 LSSP48449 732 aa27.63■■■□□ 2.01
BRF1-213ENST00000548421 C10orf62Q5T681 223 aaPredicted RBP27.63■■■□□ 2.01
BRF1-213ENST00000548421 VWA5B1Q5TIE3 1220 aa27.63■■■□□ 2.01
BRF1-213ENST00000548421 GKAP1Q5VSY0 366 aaPredicted RBP27.63■■■□□ 2.01
BRF1-213ENST00000548421 EPGNQ6UW88 154 aa27.63■■■□□ 2.01
BRF1-213ENST00000548421 PAQR7Q86WK9 346 aa27.63■■■□□ 2.01
BRF1-213ENST00000548421 NAXDQ8IW45 347 aa27.63■■■□□ 2.01
BRF1-213ENST00000548421 ZNF740Q8NDX6 193 aa27.63■■■□□ 2.01
BRF1-213ENST00000548421 OR7G3Q8NG95 312 aa27.63■■■□□ 2.01
BRF1-213ENST00000548421 WDR20Q8TBZ3 569 aa27.63■■■□□ 2.01
BRF1-213ENST00000548421 SELENOMQ8WWX9 145 aa27.63■■■□□ 2.01
BRF1-213ENST00000548421 CCT6BQ92526 530 aa27.63■■■□□ 2.01
BRF1-213ENST00000548421 ZUFSPQ96AP4 578 aa27.63■■■□□ 2.01
BRF1-213ENST00000548421 MEAF6Q9HAF1 191 aa27.63■■■□□ 2.01
BRF1-213ENST00000548421 FTSJ1Q9UET6 329 aa27.63■■■□□ 2.01
BRF1-213ENST00000548421 ZNF490Q9ULM2 529 aaPredicted RBP27.63■■■□□ 2.01
BRF1-213ENST00000548421 UNC13CQ8NB66 2214 aa27.62■■■□□ 2.01
BRF1-213ENST00000548421 CDH3P22223 829 aa27.62■■■□□ 2.01
BRF1-213ENST00000548421 ARFIP2P53365 341 aa27.62■■■□□ 2.01
BRF1-213ENST00000548421 ZNF33BQ06732 778 aa27.62■■■□□ 2.01
BRF1-213ENST00000548421 ABRAXAS2Q15018 415 aa27.62■■■□□ 2.01
BRF1-213ENST00000548421 PLXDC1Q8IUK5 500 aa27.62■■■□□ 2.01
BRF1-213ENST00000548421 C10orf82Q8WW14 230 aa27.62■■■□□ 2.01
BRF1-213ENST00000548421 PPP1R36Q96LQ0 422 aa27.62■■■□□ 2.01
BRF1-213ENST00000548421 PPM1MQ96MI6 270 aa27.62■■■□□ 2.01
BRF1-213ENST00000548421 TGM7Q96PF1 710 aa27.62■■■□□ 2.01
BRF1-213ENST00000548421 CD180Q99467 661 aa27.62■■■□□ 2.01
BRF1-213ENST00000548421 TMEM120AQ9BXJ8 343 aa27.62■■■□□ 2.01
BRF1-213ENST00000548421 SEMA6CQ9H3T2 930 aa27.62■■■□□ 2.01
BRF1-213ENST00000548421 NT5DC2Q9H857 520 aa27.62■■■□□ 2.01
BRF1-213ENST00000548421 TRBC2A0A5B9 178 aa27.61■■■□□ 2.01
BRF1-213ENST00000548421 OR2A25A4D2G3 310 aa27.61■■■□□ 2.01
BRF1-213ENST00000548421 C4orf47A7E2U8 309 aa27.61■■■□□ 2.01
BRF1-213ENST00000548421 DIAPH2O60879 1101 aa27.61■■■□□ 2.01
BRF1-213ENST00000548421 PDYNP01213 254 aa27.61■■■□□ 2.01
BRF1-213ENST00000548421 PCNAP12004 261 aa27.61■■■□□ 2.01
BRF1-213ENST00000548421 CKMT2P17540 419 aa27.61■■■□□ 2.01
BRF1-213ENST00000548421 GFERP55789 205 aa27.61■■■□□ 2.01
BRF1-213ENST00000548421 SGO1Q5FBB7 561 aa27.61■■■□□ 2.01
BRF1-213ENST00000548421 FIGLAQ6QHK4 219 aa27.61■■■□□ 2.01
BRF1-213ENST00000548421 WDR74Q6RFH5 385 aaPredicted RBP27.61■■■□□ 2.01
BRF1-213ENST00000548421 TBC1D19Q8N5T2 526 aa27.61■■■□□ 2.01
BRF1-213ENST00000548421 MTFMTQ96DP5 389 aaKnown RBP27.61■■■□□ 2.01
BRF1-213ENST00000548421 SARGQ9BW04 601 aa27.61■■■□□ 2.01
BRF1-213ENST00000548421 C1GALT1Q9NS00 363 aa27.61■■■□□ 2.01
BRF1-213ENST00000548421 FARSBQ9NSD9 589 aaKnown RBP27.61■■■□□ 2.01
BRF1-213ENST00000548421 TSC22D4Q9Y3Q8 395 aa27.61■■■□□ 2.01
BRF1-213ENST00000548421 PTGDR2Q9Y5Y4 395 aa27.61■■■□□ 2.01
BRF1-213ENST00000548421 MDC1Q14676 2089 aaKnown RBP27.6■■■□□ 2.01
BRF1-213ENST00000548421 FEZF1A0PJY2 475 aa27.6■■■□□ 2.01
BRF1-213ENST00000548421 TLCD2A6NGC4 264 aa27.6■■■□□ 2.01
BRF1-213ENST00000548421 HAT1O14929 419 aa27.6■■■□□ 2.01
BRF1-213ENST00000548421 LINC00032P0C843 101 aa27.6■■■□□ 2.01
BRF1-213ENST00000548421 IDH3AP50213 366 aa27.6■■■□□ 2.01
BRF1-213ENST00000548421 NEK2P51955 445 aa27.6■■■□□ 2.01
BRF1-213ENST00000548421 SQSTM1Q13501 440 aa27.6■■■□□ 2.01
BRF1-213ENST00000548421 RBBP5Q15291 538 aaKnown RBP27.6■■■□□ 2.01
BRF1-213ENST00000548421 SLC9B1Q4ZJI4 515 aa27.6■■■□□ 2.01
BRF1-213ENST00000548421 SCIMPQ6UWF3 145 aa27.6■■■□□ 2.01
BRF1-213ENST00000548421 FAM92BQ6ZTR7 304 aa27.6■■■□□ 2.01
BRF1-213ENST00000548421 BAHD1Q8TBE0 780 aaPredicted RBP27.6■■■□□ 2.01
BRF1-213ENST00000548421 STON2Q8WXE9 905 aa27.6■■■□□ 2.01
BRF1-213ENST00000548421 HBEGFQ99075 208 aa27.6■■■□□ 2.01
BRF1-213ENST00000548421 APOBEC2Q9Y235 224 aaKnown RBP27.6■■■□□ 2.01
BRF1-213ENST00000548421 MN1Q10571 1320 aaPredicted RBP27.6■■■□□ 2.01
BRF1-213ENST00000548421 EP300Q09472 2414 aaPredicted RBP27.6■■■□□ 2.01
BRF1-213ENST00000548421 SH3BP5O60239 455 aa27.59■■■□□ 2.01
BRF1-213ENST00000548421 NRP2O60462 931 aa27.59■■■□□ 2.01
BRF1-213ENST00000548421 PVRP15151 417 aa27.59■■■□□ 2.01
BRF1-213ENST00000548421 EZRP15311 586 aaKnown RBP27.59■■■□□ 2.01
BRF1-213ENST00000548421 ACP1P24666 158 aa27.59■■■□□ 2.01
BRF1-213ENST00000548421 CSF2RBP32927 897 aa27.59■■■□□ 2.01
BRF1-213ENST00000548421 XKR7Q5GH72 579 aa27.59■■■□□ 2.01
BRF1-213ENST00000548421 FCRL6Q6DN72 434 aa27.59■■■□□ 2.01
BRF1-213ENST00000548421 TRIM46Q7Z4K8 759 aa27.59■■■□□ 2.01
BRF1-213ENST00000548421 HUS1BQ8NHY5 278 aa27.59■■■□□ 2.01
BRF1-213ENST00000548421 MAELQ96JY0 434 aaKnown RBP27.59■■■□□ 2.01
BRF1-213ENST00000548421 MAP3K3Q99759 626 aa27.59■■■□□ 2.01
BRF1-213ENST00000548421 EBF4Q9BQW3 602 aa27.59■■■□□ 2.01
BRF1-213ENST00000548421 SERTM1A2A2V5 107 aa27.58■■■□□ 2.01
BRF1-213ENST00000548421 SDHDO14521 159 aa27.58■■■□□ 2.01
BRF1-213ENST00000548421 OR1F1O43749 312 aa27.58■■■□□ 2.01
BRF1-213ENST00000548421 C9P02748 559 aa27.58■■■□□ 2.01
BRF1-213ENST00000548421 RPLP0P05388 317 aaKnown RBP27.58■■■□□ 2.01
BRF1-213ENST00000548421 EPHA3P29320 983 aa27.58■■■□□ 2.01
BRF1-213ENST00000548421 PHEXP78562 749 aa27.58■■■□□ 2.01
BRF1-213ENST00000548421 CFHR1Q03591 330 aa27.58■■■□□ 2.01
BRF1-213ENST00000548421 DDX39BQ13838 428 aaKnown RBP27.58■■■□□ 2.01
BRF1-213ENST00000548421 USP53Q70EK8 1073 aa27.58■■■□□ 2.01
BRF1-213ENST00000548421 PLD3Q8IV08 490 aa27.58■■■□□ 2.01
BRF1-213ENST00000548421 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP27.58■■■□□ 2.01
BRF1-213ENST00000548421 CARFQ8N187 725 aa27.58■■■□□ 2.01
BRF1-213ENST00000548421 TTLQ8NG68 377 aa27.58■■■□□ 2.01
BRF1-213ENST00000548421 C3orf30Q96M34 536 aa27.58■■■□□ 2.01
BRF1-213ENST00000548421 TRAPPC9Q96Q05 1148 aa27.58■■■□□ 2.01
BRF1-213ENST00000548421 MTERF1Q99551 399 aaKnown RBP27.58■■■□□ 2.01
BRF1-213ENST00000548421 KLHL25Q9H0H3 589 aa27.58■■■□□ 2.01
BRF1-213ENST00000548421 RHBGQ9H310 441 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms