RNA–Protein interactions for RNA: ENST00000548401.1

LETMD1-216, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-216ENST00000548401 SLBPQ14493 270 aaKnown RBP eCLIP16.52■□□□□ 0.24
LETMD1-216ENST00000548401 FRMD7Q6ZUT3 714 aa16.52■□□□□ 0.24
LETMD1-216ENST00000548401 ERMP1Q7Z2K6 904 aa16.52■□□□□ 0.24
LETMD1-216ENST00000548401 VN1R4Q7Z5H5 301 aa16.52■□□□□ 0.24
LETMD1-216ENST00000548401 PTCD3Q96EY7 689 aaKnown RBP16.52■□□□□ 0.24
LETMD1-216ENST00000548401 DDA1Q9BW61 102 aa16.52■□□□□ 0.24
LETMD1-216ENST00000548401 ASCL3Q9NQ33 180 aa16.52■□□□□ 0.24
LETMD1-216ENST00000548401 ANGPTL3Q9Y5C1 460 aa16.52■□□□□ 0.24
LETMD1-216ENST00000548401 PCDHGA4Q9Y5G9 962 aa16.52■□□□□ 0.24
LETMD1-216ENST00000548401 PCDHGA3Q9Y5H0 932 aa16.52■□□□□ 0.24
LETMD1-216ENST00000548401 KCNE1BA0A087WTH5 132 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 LOC105369274A0A096LPK9 316 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 LOC102723532A0A0G2JNH3 316 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 A0A1B0GTL3 188 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 CDRT15L2A8MXV6 281 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 P2RX6O15547 441 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 MAP3K7O43318 606 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 KATNA1O75449 491 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 GCGRP47871 477 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 SCTRP47872 440 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 MAPK10P53779 464 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 CDH13P55290 713 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 RPS15AP62244 130 aaKnown RBP16.51■□□□□ 0.23
LETMD1-216ENST00000548401 IRF8Q02556 426 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 FOXM1Q08050 763 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 CHIT1Q13231 466 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 IL11RAQ14626 422 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 XKR6Q5GH73 641 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 ZC3H12BQ5HYM0 836 aaKnown RBP16.51■□□□□ 0.23
LETMD1-216ENST00000548401 FOXR1Q6PIV2 292 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 MCATQ8IVS2 390 aaKnown RBP16.51■□□□□ 0.23
LETMD1-216ENST00000548401 OR4N4Q8N0Y3 316 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 GOLGA6L1Q8N7Z2 621 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 OR6Y1Q8NGX8 325 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 OR8K5Q8NH50 307 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 NXPE2Q96DL1 559 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 TAAR9Q96RI9 348 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 CTRCQ99895 268 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 SELENOSQ9BQE4 189 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 AIF1LQ9BQI0 150 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 EFCAB11Q9BUY7 163 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 NOL11Q9H8H0 719 aaKnown RBP16.51■□□□□ 0.23
LETMD1-216ENST00000548401 IPPKQ9H8X2 491 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 FANCEQ9HB96 536 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 KCNK9Q9NPC2 374 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 SEMA4BQ9NPR2 832 aaPredicted RBP16.51■□□□□ 0.23
LETMD1-216ENST00000548401 SLC39A1Q9NY26 324 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 B3GALT1Q9Y5Z6 326 aa16.51■□□□□ 0.23
LETMD1-216ENST00000548401 H0YGG7 62 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 PPP6CO00743 305 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 POLR1CO15160 346 aaPredicted RBP16.5■□□□□ 0.23
LETMD1-216ENST00000548401 ATP8B1O43520 1251 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 LCMT2O60294 686 aaKnown RBP16.5■□□□□ 0.23
LETMD1-216ENST00000548401 UGDHO60701 494 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 TRIM13O60858 407 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 SUPT7LO94864 414 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 TNFSF15O95150 251 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 TSPAN8P19075 237 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 NAGLUP54802 743 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 WDR4P57081 412 aaKnown RBP16.5■□□□□ 0.23
LETMD1-216ENST00000548401 ARF3P61204 181 aaPredicted RBP16.5■□□□□ 0.23
LETMD1-216ENST00000548401 CLCQ05315 142 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 GRHL2Q6ISB3 625 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 LETMD1Q6P1Q0 360 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 CYB5D1Q6P9G0 228 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.5■□□□□ 0.23
LETMD1-216ENST00000548401 ARHGEF39Q8N4T4 335 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 ANKRD42Q8N9B4 389 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 ANKRD53Q8N9V6 530 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 L3MBTL4Q8NA19 623 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 MFSD9Q8NBP5 474 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 USP7Q93009 1102 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 THAP11Q96EK4 314 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 SLC46A1Q96NT5 459 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 ZNF382Q96SR6 550 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 NTMT1Q9BV86 223 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 GATA5Q9BWX5 397 aaPredicted RBP16.5■□□□□ 0.23
LETMD1-216ENST00000548401 TMEM121BQ9BXQ6 578 aaPredicted RBP16.5■□□□□ 0.23
LETMD1-216ENST00000548401 B3GNT4Q9C0J1 378 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 FOXJ2Q9P0K8 574 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 ZNF225Q9UK10 706 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 RARRES3Q9UL19 164 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 SDK2Q58EX2 2172 aa16.5■□□□□ 0.23
LETMD1-216ENST00000548401 SPTBP11277 2137 aa16.49■□□□□ 0.23
LETMD1-216ENST00000548401 FER1L5A0AVI2 2057 aa16.49■□□□□ 0.23
LETMD1-216ENST00000548401 TRABD2BA6NFA1 517 aa16.49■□□□□ 0.23
LETMD1-216ENST00000548401 ZSCAN9O15535 394 aaPredicted RBP16.49■□□□□ 0.23
LETMD1-216ENST00000548401 BRINP1O60477 761 aa16.49■□□□□ 0.23
LETMD1-216ENST00000548401 OTCP00480 354 aa16.49■□□□□ 0.23
LETMD1-216ENST00000548401 ZNF28P17035 718 aa16.49■□□□□ 0.23
LETMD1-216ENST00000548401 CCR10P46092 362 aa16.49■□□□□ 0.23
LETMD1-216ENST00000548401 ITGA1P56199 1179 aa16.49■□□□□ 0.23
LETMD1-216ENST00000548401 VSX2P58304 361 aaPredicted RBP16.49■□□□□ 0.23
LETMD1-216ENST00000548401 LCP2Q13094 533 aa16.49■□□□□ 0.23
LETMD1-216ENST00000548401 PRTGQ2VWP7 1150 aa16.49■□□□□ 0.23
LETMD1-216ENST00000548401 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.49■□□□□ 0.23
LETMD1-216ENST00000548401 GGTA1PQ4G0N0 100 aa16.49■□□□□ 0.23
LETMD1-216ENST00000548401 CES4AQ5XG92 561 aa16.49■□□□□ 0.23
LETMD1-216ENST00000548401 FAM219BQ5XKK7 198 aa16.49■□□□□ 0.23
LETMD1-216ENST00000548401 ADNP2Q6IQ32 1131 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms