RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 MT-ND3P03897 115 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 MPOP05164 745 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 TPBGLP0DKB5 382 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 THRAP10827 490 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 AMD1P17707 334 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 TFEBP19484 476 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 CD1CP29017 333 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 IMPA1P29218 277 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 ID4P47928 161 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 GLRBP48167 497 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 KPNA2P52292 529 aaKnown RBP6.11□□□□□ -1.43
PRKDC-211ENST00000546304 CLDN6P56747 220 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 PPP1CAP62136 330 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 CCL7P80098 99 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 E2F1Q01094 437 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 DLG1Q12959 904 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 PRKAA1Q13131 559 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 CASP8Q14790 479 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 ARHGAP19Q14CB8 494 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 OR4D1Q15615 310 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 CLPPQ16740 277 aaPredicted RBP6.11□□□□□ -1.43
PRKDC-211ENST00000546304 TECRLQ5HYJ1 363 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 CEP85LQ5SZL2 805 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 HES3Q5TGS1 186 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 NKAIN2Q5VXU1 208 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 ARMC6Q6NXE6 501 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 IRGCQ6NXR0 463 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 WDR74Q6RFH5 385 aaPredicted RBP6.11□□□□□ -1.43
PRKDC-211ENST00000546304 CYHR1Q6ZMK1 362 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 NLRC3Q7RTR2 1065 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 CLEC14AQ86T13 490 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 SLCO6A1Q86UG4 719 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 LCA5Q86VQ0 697 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 IQCKQ8N0W5 287 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 LINC01555Q8NAE3 123 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 OR4E2Q8NGC2 313 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 OR9A1PQ8NGU1 263 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 OR2L8Q8NGY9 312 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 HMGCLL1Q8TB92 370 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 MCOLN3Q8TDD5 553 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 ACMSDQ8TDX5 336 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 DENND1AQ8TEH3 1009 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 NKD1Q969G9 470 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 KIAA1191Q96A73 305 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 KIRREL1Q96J84 757 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 TGM7Q96PF1 710 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 PKP4Q99569 1192 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 ROPN1BQ9BZX4 212 aaPredicted RBP6.11□□□□□ -1.43
PRKDC-211ENST00000546304 ABCG4Q9H172 646 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 ROPN1Q9HAT0 212 aaPredicted RBP6.11□□□□□ -1.43
PRKDC-211ENST00000546304 PARVBQ9HBI1 364 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 NMRAL1Q9HBL8 299 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 ARL15Q9NXU5 204 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 NUDT4Q9NZJ9 180 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 TMEM9Q9P0T7 183 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 STOX2Q9P2F5 926 aaPredicted RBP6.11□□□□□ -1.43
PRKDC-211ENST00000546304 XPR1Q9UBH6 696 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 DUSP13Q9UII6 198 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 POMT2Q9UKY4 750 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 OARD1Q9Y530 152 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 ACACBO00763 2458 aa6.11□□□□□ -1.43
PRKDC-211ENST00000546304 CFAP47Q6ZTR5 3102 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 SEC16AO15027 2179 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 FER1L5A0AVI2 2057 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 PIPSLA2A3N6 862 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 ZNF503-AS2A6NEH8 195 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 TLCD2A6NGC4 264 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 NCF1BA6NI72 391 aaPredicted RBP6.1□□□□□ -1.43
PRKDC-211ENST00000546304 GOLGA6L10A6NI86 522 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 SYCE1LA8MT33 242 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 NCF1CA8MVU1 366 aaPredicted RBP6.1□□□□□ -1.43
PRKDC-211ENST00000546304 FOXO6A8MYZ6 492 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 C2orf74A8MZ97 194 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 SUPT3HB4E1H0 165 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.1□□□□□ -1.43
PRKDC-211ENST00000546304 BTN3A3O00478 584 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 RGS16O15492 202 aaPredicted RBP6.1□□□□□ -1.43
PRKDC-211ENST00000546304 GLRA3O75311 464 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 SUPT3HO75486 399 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 RASSF9O75901 435 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 GUCA1CO95843 209 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 C9P02748 559 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 S100BP04271 92 aaPredicted RBP6.1□□□□□ -1.43
PRKDC-211ENST00000546304 CHRM5P08912 532 aaPredicted RBP6.1□□□□□ -1.43
PRKDC-211ENST00000546304 HIST1H2AGP0C0S8 130 aaPredicted RBP6.1□□□□□ -1.43
PRKDC-211ENST00000546304 MYZAPP0CAP1 466 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 COL6A2P12110 1019 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 NCF1P14598 390 aaPredicted RBP6.1□□□□□ -1.43
PRKDC-211ENST00000546304 UGT2B7P16662 529 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 KRT4P19013 534 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 POLR2CP19387 275 aaPredicted RBP6.1□□□□□ -1.43
PRKDC-211ENST00000546304 HIST1H2ADP20671 130 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 PSMB5P28074 263 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 PEBP1P30086 187 aaKnown RBP6.1□□□□□ -1.43
PRKDC-211ENST00000546304 CCKBRP32239 447 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 HSD17B2P37059 387 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 PNLIPRP1P54315 467 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 CDKL1Q00532 357 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 CFHR1Q03591 330 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 SQSTM1Q13501 440 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms