RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 ETS1P14921 441 aa15.76■□□□□ 0.11
CPSF7-225ENST00000545934 NMBRP28336 390 aa15.76■□□□□ 0.11
CPSF7-225ENST00000545934 RPA3P35244 121 aaPredicted RBP15.76■□□□□ 0.11
CPSF7-225ENST00000545934 SMSP52788 366 aa15.76■□□□□ 0.11
CPSF7-225ENST00000545934 CASP6P55212 293 aa15.76■□□□□ 0.11
CPSF7-225ENST00000545934 ADARP55265 1226 aaKnown RBP15.76■□□□□ 0.11
CPSF7-225ENST00000545934 KRTAP10-9P60411 292 aa15.76■□□□□ 0.11
CPSF7-225ENST00000545934 LANCL3Q6ZV70 420 aa15.76■□□□□ 0.11
CPSF7-225ENST00000545934 CPEB2Q7Z5Q1 589 aaKnown RBP15.76■□□□□ 0.11
CPSF7-225ENST00000545934 LRRC56Q8IYG6 542 aaPredicted RBP15.76■□□□□ 0.11
CPSF7-225ENST00000545934 BEST3Q8N1M1 668 aa15.76■□□□□ 0.11
CPSF7-225ENST00000545934 ACRBPQ8NEB7 543 aa15.76■□□□□ 0.11
CPSF7-225ENST00000545934 C14orf79Q96F83 325 aa15.76■□□□□ 0.11
CPSF7-225ENST00000545934 ZNF354BQ96LW1 612 aa15.76■□□□□ 0.11
CPSF7-225ENST00000545934 SIGLEC12Q96PQ1 595 aa15.76■□□□□ 0.11
CPSF7-225ENST00000545934 CYTH2Q99418 400 aa15.76■□□□□ 0.11
CPSF7-225ENST00000545934 NPAS2Q99743 824 aa15.76■□□□□ 0.11
CPSF7-225ENST00000545934 EIF2B3Q9NR50 452 aaKnown RBP15.76■□□□□ 0.11
CPSF7-225ENST00000545934 GALPQ9UBC7 116 aa15.76■□□□□ 0.11
CPSF7-225ENST00000545934 PCYOX1Q9UHG3 505 aa15.76■□□□□ 0.11
CPSF7-225ENST00000545934 MEMO1Q9Y316 297 aa15.76■□□□□ 0.11
CPSF7-225ENST00000545934 IGHV3-20A0A0C4DH32 117 aa15.75■□□□□ 0.11
CPSF7-225ENST00000545934 E7ENX8 843 aa15.75■□□□□ 0.11
CPSF7-225ENST00000545934 SEC24DO94855 1032 aaPredicted RBP15.75■□□□□ 0.11
CPSF7-225ENST00000545934 CCNDBP1O95273 360 aa15.75■□□□□ 0.11
CPSF7-225ENST00000545934 IPO7O95373 1038 aaKnown RBP15.75■□□□□ 0.11
CPSF7-225ENST00000545934 FTCDO95954 541 aa15.75■□□□□ 0.11
CPSF7-225ENST00000545934 PTMSP20962 102 aa15.75■□□□□ 0.11
CPSF7-225ENST00000545934 HSD17B2P37059 387 aa15.75■□□□□ 0.11
CPSF7-225ENST00000545934 PNLIPRP1P54315 467 aa15.75■□□□□ 0.11
CPSF7-225ENST00000545934 CRADDP78560 199 aa15.75■□□□□ 0.11
CPSF7-225ENST00000545934 TAP2Q03519 686 aa15.75■□□□□ 0.11
CPSF7-225ENST00000545934 TUBA3CQ13748 450 aa15.75■□□□□ 0.11
CPSF7-225ENST00000545934 KRTCAP3Q53RY4 240 aa15.75■□□□□ 0.11
CPSF7-225ENST00000545934 ACSBG2Q5FVE4 666 aa15.75■□□□□ 0.11
CPSF7-225ENST00000545934 ACER2Q5QJU3 275 aa15.75■□□□□ 0.11
CPSF7-225ENST00000545934 TUBA3EQ6PEY2 450 aa15.75■□□□□ 0.11
CPSF7-225ENST00000545934 SPNS3Q6ZMD2 512 aa15.75■□□□□ 0.11
CPSF7-225ENST00000545934 SPPL2CQ8IUH8 684 aa15.75■□□□□ 0.11
CPSF7-225ENST00000545934 SYCE1Q8N0S2 351 aa15.75■□□□□ 0.11
CPSF7-225ENST00000545934 FBXO15Q8NCQ5 510 aaPredicted RBP15.75■□□□□ 0.11
CPSF7-225ENST00000545934 RERGQ96A58 199 aaPredicted RBP15.75■□□□□ 0.11
CPSF7-225ENST00000545934 PKP4Q99569 1192 aa15.75■□□□□ 0.11
CPSF7-225ENST00000545934 SPOCK3Q9BQ16 436 aa15.75■□□□□ 0.11
CPSF7-225ENST00000545934 TREX2Q9BQ50 279 aaPredicted RBP15.75■□□□□ 0.11
CPSF7-225ENST00000545934 IL22Q9GZX6 179 aa15.75■□□□□ 0.11
CPSF7-225ENST00000545934 UTP6Q9NYH9 597 aaKnown RBP15.75■□□□□ 0.11
CPSF7-225ENST00000545934 PAK5Q9P286 719 aa15.75■□□□□ 0.11
CPSF7-225ENST00000545934 TAC3Q9UHF0 121 aa15.75■□□□□ 0.11
CPSF7-225ENST00000545934 A8MUI8 341 aa15.74■□□□□ 0.11
CPSF7-225ENST00000545934 H3BMM5 538 aa15.74■□□□□ 0.11
CPSF7-225ENST00000545934 HAT1O14929 419 aa15.74■□□□□ 0.11
CPSF7-225ENST00000545934 NSA2O95478 260 aaKnown RBP15.74■□□□□ 0.11
CPSF7-225ENST00000545934 ESR1P03372 595 aa15.74■□□□□ 0.11
CPSF7-225ENST00000545934 ESRRAP11474 423 aaPredicted RBP15.74■□□□□ 0.11
CPSF7-225ENST00000545934 CAPN3P20807 821 aa15.74■□□□□ 0.11
CPSF7-225ENST00000545934 FMO4P31512 558 aa15.74■□□□□ 0.11
CPSF7-225ENST00000545934 SESN2P58004 480 aaPredicted RBP15.74■□□□□ 0.11
CPSF7-225ENST00000545934 ABATP80404 500 aa15.74■□□□□ 0.11
CPSF7-225ENST00000545934 KCNJ11Q14654 390 aa15.74■□□□□ 0.11
CPSF7-225ENST00000545934 KLHL38Q2WGJ6 581 aa15.74■□□□□ 0.11
CPSF7-225ENST00000545934 PCGF5Q86SE9 256 aa15.74■□□□□ 0.11
CPSF7-225ENST00000545934 CRLF3Q8IUI8 442 aa15.74■□□□□ 0.11
CPSF7-225ENST00000545934 SIAH3Q8IW03 269 aa15.74■□□□□ 0.11
CPSF7-225ENST00000545934 CHERPQ8IWX8 916 aaKnown RBP15.74■□□□□ 0.11
CPSF7-225ENST00000545934 PPFIBP2Q8ND30 876 aa15.74■□□□□ 0.11
CPSF7-225ENST00000545934 OR9A4Q8NGU2 314 aa15.74■□□□□ 0.11
CPSF7-225ENST00000545934 ZNF480Q8WV37 535 aa15.74■□□□□ 0.11
CPSF7-225ENST00000545934 METTL21AQ8WXB1 218 aa15.74■□□□□ 0.11
CPSF7-225ENST00000545934 MAGED4Q96JG8 741 aa15.74■□□□□ 0.11
CPSF7-225ENST00000545934 FRMD6Q96NE9 622 aa15.74■□□□□ 0.11
CPSF7-225ENST00000545934 KIFC1Q9BW19 673 aa15.74■□□□□ 0.11
CPSF7-225ENST00000545934 HES7Q9BYE0 225 aa15.74■□□□□ 0.11
CPSF7-225ENST00000545934 TRIM5Q9C035 493 aa15.74■□□□□ 0.11
CPSF7-225ENST00000545934 ENKD1Q9H0I2 346 aa15.74■□□□□ 0.11
CPSF7-225ENST00000545934 FAM114A2Q9NRY5 505 aa15.74■□□□□ 0.11
CPSF7-225ENST00000545934 TSR3Q9UJK0 312 aaKnown RBP15.74■□□□□ 0.11
CPSF7-225ENST00000545934 ITGB1BP2Q9UKP3 347 aa15.74■□□□□ 0.11
CPSF7-225ENST00000545934 ZNF148Q9UQR1 794 aa15.74■□□□□ 0.11
CPSF7-225ENST00000545934 CCDC168Q8NDH2 2452 aa15.74■□□□□ 0.11
CPSF7-225ENST00000545934 TTI1O43156 1089 aa15.73■□□□□ 0.11
CPSF7-225ENST00000545934 MAN1A2O60476 641 aa15.73■□□□□ 0.11
CPSF7-225ENST00000545934 SLC16A8O95907 504 aa15.73■□□□□ 0.11
CPSF7-225ENST00000545934 ZSCAN5DPP0CG00 497 aa15.73■□□□□ 0.11
CPSF7-225ENST00000545934 RPL22P35268 128 aaKnown RBP15.73■□□□□ 0.11
CPSF7-225ENST00000545934 CD96P40200 585 aa15.73■□□□□ 0.11
CPSF7-225ENST00000545934 AVPR1BP47901 424 aa15.73■□□□□ 0.11
CPSF7-225ENST00000545934 NPY2RP49146 381 aa15.73■□□□□ 0.11
CPSF7-225ENST00000545934 PTK6Q13882 451 aa15.73■□□□□ 0.11
CPSF7-225ENST00000545934 NDUFA9Q16795 377 aa15.73■□□□□ 0.11
CPSF7-225ENST00000545934 BTBD16Q32M84 506 aa15.73■□□□□ 0.11
CPSF7-225ENST00000545934 RNF187Q5TA31 235 aaPredicted RBP15.73■□□□□ 0.11
CPSF7-225ENST00000545934 FCRLBQ6BAA4 426 aa15.73■□□□□ 0.11
CPSF7-225ENST00000545934 PRSS41Q7RTY9 318 aa15.73■□□□□ 0.11
CPSF7-225ENST00000545934 VN1R4Q7Z5H5 301 aa15.73■□□□□ 0.11
CPSF7-225ENST00000545934 ANKRD37Q7Z713 158 aa15.73■□□□□ 0.11
CPSF7-225ENST00000545934 SLC13A5Q86YT5 568 aaPredicted RBP15.73■□□□□ 0.11
CPSF7-225ENST00000545934 PLD3Q8IV08 490 aa15.73■□□□□ 0.11
CPSF7-225ENST00000545934 PHF10Q8WUB8 498 aaKnown RBP15.73■□□□□ 0.11
CPSF7-225ENST00000545934 C1orf54Q8WWF1 131 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms