RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 PAAF1Q9BRP4 392 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 CCDC32Q9BV29 185 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 SMG9Q9H0W8 520 aaKnown RBP6.28□□□□□ -1.4
SNHG1-225ENST00000545920 DSN1Q9H410 356 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 SLC32A1Q9H598 525 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 ATP13A3Q9H7F0 1226 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 REEP1Q9H902 201 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 SMURF2Q9HAU4 748 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 ACOT13Q9NPJ3 140 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 MKL2Q9ULH7 1088 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 ZNF490Q9ULM2 529 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-225ENST00000545920 ERVK-11Q9UQG0 969 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 ATP11BQ9Y2G3 1177 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 PADI2Q9Y2J8 665 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 IFT52Q9Y366 437 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 SH3BP1Q9Y3L3 701 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 PRKAB1Q9Y478 270 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 PCDHB14Q9Y5E9 798 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 PCDHGB3Q9Y5G1 929 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 KLK4Q9Y5K2 254 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 HEMK1Q9Y5R4 338 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-225ENST00000545920 PTPRDP23468 1912 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 NYNRINQ9P2P1 1898 aaKnown RBP6.28□□□□□ -1.4
SNHG1-225ENST00000545920 NUP205Q92621 2012 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 A0A1B0GTL3 188 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 NCF1BA6NI72 391 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-225ENST00000545920 AGAP14A8MT82 685 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 NCF1CA8MVU1 366 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-225ENST00000545920 TTC34A8MYJ7 566 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 EFCAB9A8MZ26 197 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 C9JVG2 144 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 CACNB4O00305 520 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-225ENST00000545920 QSOX1O00391 747 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 RFXANKO14593 260 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 RGS13O14921 159 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 NUAK1O60285 661 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 MYO1DO94832 1006 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 INMTO95050 263 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 EPN2O95208 641 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 MED26O95402 600 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 IFNA14P01570 189 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 GSTP1P09211 210 aaKnown RBP6.27□□□□□ -1.41
SNHG1-225ENST00000545920 FURINP09958 794 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 TFPTP0C1Z6 253 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 TRAPPC2P0DI81 140 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 TRAPPC2BP0DI82 140 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 BMP4P12644 408 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 BCKDHAP12694 445 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 ITGA2P17301 1181 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 DDX5P17844 614 aaKnown RBP6.27□□□□□ -1.41
SNHG1-225ENST00000545920 IGFBP6P24592 240 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-225ENST00000545920 CD52P31358 61 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 SOX6P35712 828 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 KRT20P35900 424 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 PIGAP37287 484 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 RPL3P39023 403 aaKnown RBP6.27□□□□□ -1.41
SNHG1-225ENST00000545920 ADH7P40394 386 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 ARL1P40616 181 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-225ENST00000545920 NSG1P42857 185 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 CTSKP43235 329 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 KIR3DL1P43629 444 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 PCYT1AP49585 367 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 CLK1P49759 484 aaKnown RBP6.27□□□□□ -1.41
SNHG1-225ENST00000545920 HTR6P50406 440 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 CCR3P51677 355 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 DGKQP52824 942 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 RBBP4Q09028 425 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 TAF10Q12962 218 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 RAPSNQ13702 412 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 MBTPS1Q14703 1052 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 NKG7Q16617 165 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 VMACQ2NL98 169 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 HKDC1Q2TB90 917 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 ADPRMQ3LIE5 342 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 CTXN3Q4LDR2 81 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 SPANXN4Q5MJ08 99 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 ADGRF1Q5T601 910 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 GPRC6AQ5T6X5 926 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 ARMC12Q5T9G4 340 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 MFSD14CQ5VZR4 134 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 NADSYN1Q6IA69 706 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 LAIR2Q6ISS4 152 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 GDF6Q6KF10 455 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-225ENST00000545920 PSAPL1Q6NUJ1 521 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 GCNT7Q6ZNI0 430 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 TAS2R42Q7RTR8 314 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 CAMKMTQ7Z624 323 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 RBM23Q86U06 439 aaKnown RBP6.27□□□□□ -1.41
SNHG1-225ENST00000545920 TRIM69Q86WT6 500 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 KRT73Q86Y46 540 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 P3H2Q8IVL5 708 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 KLHDC8AQ8IYD2 350 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 CHPFQ8IZ52 775 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 TTC29Q8NA56 475 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-225ENST00000545920 PCSK9Q8NBP7 692 aaKnown RBP6.27□□□□□ -1.41
SNHG1-225ENST00000545920 ZNF540Q8NDQ6 660 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 LPCAT1Q8NF37 534 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 OR8J2Q8NGG1 315 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 MCFD2Q8NI22 146 aa6.27□□□□□ -1.41
SNHG1-225ENST00000545920 SH3RF2Q8TEC5 729 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms