RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 MSANTD1Q6ZTZ1 278 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 ALDH16A1Q8IZ83 802 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 TRAM1L1Q8N609 369 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 BEND7Q8N7W2 519 aaPredicted RBP5.62□□□□□ -1.51
VPS50-220ENST00000544910 VANGL1Q8TAA9 524 aaPredicted RBP5.62□□□□□ -1.51
VPS50-220ENST00000544910 PXYLP1Q8TE99 480 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 ING5Q8WYH8 240 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 MUS81Q96NY9 551 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 SGIP1Q9BQI5 828 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 SPATA9Q9BWV2 254 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 SLITRK2Q9H156 845 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 AASDHPPTQ9NRN7 309 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 TMEM30AQ9NV96 361 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 AKAP7Q9P0M2 348 aaPredicted RBP5.62□□□□□ -1.51
VPS50-220ENST00000544910 EBF1Q9UH73 591 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 RAB23Q9ULC3 237 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 SSR3Q9UNL2 185 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 CEPT1Q9Y6K0 416 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 IRGMA1A4Y4 181 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 PDPK1O15530 556 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 SBK3P0C264 359 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 BCKDHAP12694 445 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 GJA1P17302 382 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 PRDX3P30048 256 aaKnown RBP5.61□□□□□ -1.51
VPS50-220ENST00000544910 ARRB2P32121 409 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 HTR6P50406 440 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 SLC16A1P53985 500 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 GK3PQ14409 553 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 ZNF829Q3KNS6 432 aaPredicted RBP5.61□□□□□ -1.51
VPS50-220ENST00000544910 CARM1Q86X55 608 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 CMTM8Q8IZV2 173 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 TEX47Q8TBZ9 253 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 KCNC2Q96PR1 638 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 SLC38A2Q96QD8 506 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 SLC30A3Q99726 388 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 SLC29A1Q99808 456 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 NPLQ9BXD5 320 aaPredicted RBP5.61□□□□□ -1.51
VPS50-220ENST00000544910 BRINP2Q9C0B6 783 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 PCBD2Q9H0N5 130 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 CAPN10Q9HC96 672 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 ANKHQ9HCJ1 492 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 ZSCAN32Q9NX65 697 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 LHX3Q9UBR4 397 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 B4GALT6Q9UBX8 382 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 FAM92AA1XBS5 289 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 SAP18O00422 153 aaKnown RBP5.61□□□□□ -1.51
VPS50-220ENST00000544910 PPP6CO00743 305 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 ADH5P11766 374 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 ITIH1P19827 911 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 TM4SF4P48230 202 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 MAPK12P53778 367 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 PRKAG1P54619 331 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 HSF2Q03933 536 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 STX4Q12846 297 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 TEAD2Q15562 447 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 IRAK1BP1Q5VVH5 260 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 CST9Q5W186 159 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 ADGRG5Q8IZF4 528 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 SMYD1Q8NB12 490 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 OR10G2Q8NGC3 310 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 TFAP2CQ92754 450 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 RHBDF1Q96CC6 855 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 TTLL2Q9BWV7 592 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 SOX17Q9H6I2 414 aaPredicted RBP5.61□□□□□ -1.51
VPS50-220ENST00000544910 KAT8Q9H7Z6 458 aaKnown RBP5.61□□□□□ -1.51
VPS50-220ENST00000544910 RDH14Q9HBH5 336 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 HEBP1Q9NRV9 189 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 FAM118AQ9NWS6 357 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 PCDHA9Q9Y5H5 950 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 CITO14578 2027 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 PITPNM1O00562 1244 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 AP1G1O43747 822 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 GADD45GO95257 159 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 IFNA16P05015 189 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 JUPP14923 745 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 PRKACGP22612 351 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 TIE1P35590 1138 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 DPP6P42658 865 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 RGRP47804 291 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 STK19P49842 368 aaPredicted RBP5.61□□□□□ -1.51
VPS50-220ENST00000544910 HLCSP50747 726 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 SRP54P61011 504 aaKnown RBP5.61□□□□□ -1.51
VPS50-220ENST00000544910 ARF5P84085 180 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 BNIP3Q12983 259 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 MOGQ16653 247 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 ANKRD26P1Q6NSI1 321 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 NOXRED1Q6NXP6 359 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 METTL2BQ6P1Q9 378 aaKnown RBP5.61□□□□□ -1.51
VPS50-220ENST00000544910 SYCE2Q6PIF2 218 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 CRTC1Q6UUV9 634 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 TMEM207Q6UWW9 146 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 NPAS3Q8IXF0 933 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 LILRA2Q8N149 483 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 SHKBP1Q8TBC3 707 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 TRMT2BQ96GJ1 504 aaKnown RBP5.61□□□□□ -1.51
VPS50-220ENST00000544910 EFCAB11Q9BUY7 163 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 ITPAQ9BY32 194 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 RNF186Q9NXI6 227 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 PSME2Q9UL46 239 aa5.61□□□□□ -1.51
VPS50-220ENST00000544910 PHF24Q9UPV7 400 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms