RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 ZNF480Q8WV37 535 aa15.43■□□□□ 0.06
DDX55-212ENST00000544738 ITLN2Q8WWU7 325 aaPredicted RBP15.43■□□□□ 0.06
DDX55-212ENST00000544738 SLCO2A1Q92959 643 aa15.43■□□□□ 0.06
DDX55-212ENST00000544738 MVB12AQ96EY5 273 aa15.43■□□□□ 0.06
DDX55-212ENST00000544738 CNDP1Q96KN2 507 aa15.43■□□□□ 0.06
DDX55-212ENST00000544738 GPR21Q99679 349 aa15.43■□□□□ 0.06
DDX55-212ENST00000544738 EBNA1BP2Q99848 306 aaKnown RBP15.43■□□□□ 0.06
DDX55-212ENST00000544738 GRPEL1Q9HAV7 217 aa15.43■□□□□ 0.06
DDX55-212ENST00000544738 CTSFQ9UBX1 484 aa15.43■□□□□ 0.06
DDX55-212ENST00000544738 ASIC3Q9UHC3 531 aa15.43■□□□□ 0.06
DDX55-212ENST00000544738 TAC3Q9UHF0 121 aa15.43■□□□□ 0.06
DDX55-212ENST00000544738 FBXL4Q9UKA2 621 aa15.43■□□□□ 0.06
DDX55-212ENST00000544738 MAU2Q9Y6X3 613 aa15.43■□□□□ 0.06
DDX55-212ENST00000544738 ABCA2Q9BZC7 2435 aa15.43■□□□□ 0.06
DDX55-212ENST00000544738 PCM1Q15154 2024 aa15.43■□□□□ 0.06
DDX55-212ENST00000544738 H0YGG7 62 aa15.42■□□□□ 0.06
DDX55-212ENST00000544738 SOCS6O14544 535 aa15.42■□□□□ 0.06
DDX55-212ENST00000544738 NRP2O60462 931 aa15.42■□□□□ 0.06
DDX55-212ENST00000544738 SYF2O95926 243 aaKnown RBP15.42■□□□□ 0.06
DDX55-212ENST00000544738 EZRP15311 586 aaKnown RBP15.42■□□□□ 0.06
DDX55-212ENST00000544738 TCP1P17987 556 aaKnown RBP15.42■□□□□ 0.06
DDX55-212ENST00000544738 HRH2P25021 359 aa15.42■□□□□ 0.06
DDX55-212ENST00000544738 ARF3P61204 181 aaPredicted RBP15.42■□□□□ 0.06
DDX55-212ENST00000544738 YBX1P67809 324 aaKnown RBP15.42■□□□□ 0.06
DDX55-212ENST00000544738 TUBB8Q3ZCM7 444 aa15.42■□□□□ 0.06
DDX55-212ENST00000544738 GARNL3Q5VVW2 1013 aa15.42■□□□□ 0.06
DDX55-212ENST00000544738 ZNF425Q6IV72 752 aa15.42■□□□□ 0.06
DDX55-212ENST00000544738 KIRREL2Q6UWL6 708 aa15.42■□□□□ 0.06
DDX55-212ENST00000544738 CYHR1Q6ZMK1 362 aa15.42■□□□□ 0.06
DDX55-212ENST00000544738 MRGPRGQ86SM5 289 aa15.42■□□□□ 0.06
DDX55-212ENST00000544738 METTL27Q8N6F8 245 aaPredicted RBP15.42■□□□□ 0.06
DDX55-212ENST00000544738 STT3BQ8TCJ2 826 aa15.42■□□□□ 0.06
DDX55-212ENST00000544738 CD200R1Q8TD46 325 aa15.42■□□□□ 0.06
DDX55-212ENST00000544738 MCOLN3Q8TDD5 553 aa15.42■□□□□ 0.06
DDX55-212ENST00000544738 RELTQ969Z4 430 aa15.42■□□□□ 0.06
DDX55-212ENST00000544738 RERGQ96A58 199 aaPredicted RBP15.42■□□□□ 0.06
DDX55-212ENST00000544738 MIEF2Q96C03 454 aa15.42■□□□□ 0.06
DDX55-212ENST00000544738 CABS1Q96KC9 395 aa15.42■□□□□ 0.06
DDX55-212ENST00000544738 AARSD1Q9BTE6 412 aaKnown RBP15.42■□□□□ 0.06
DDX55-212ENST00000544738 TRIM8Q9BZR9 551 aa15.42■□□□□ 0.06
DDX55-212ENST00000544738 SOX17Q9H6I2 414 aaPredicted RBP15.42■□□□□ 0.06
DDX55-212ENST00000544738 IARS2Q9NSE4 1012 aaKnown RBP15.42■□□□□ 0.06
DDX55-212ENST00000544738 PCYOX1Q9UHG3 505 aa15.42■□□□□ 0.06
DDX55-212ENST00000544738 HS3ST3B1Q9Y662 390 aa15.42■□□□□ 0.06
DDX55-212ENST00000544738 ANKHD1Q8IWZ3 2542 aaKnown RBP15.42■□□□□ 0.06
DDX55-212ENST00000544738 IGKV1-8A0A0C4DH67 115 aa15.41■□□□□ 0.06
DDX55-212ENST00000544738 SMAPO00193 183 aa15.41■□□□□ 0.06
DDX55-212ENST00000544738 DNALI1O14645 258 aaPredicted RBP15.41■□□□□ 0.06
DDX55-212ENST00000544738 JRKO75564 520 aa15.41■□□□□ 0.06
DDX55-212ENST00000544738 ZGLP1P0C6A0 271 aa15.41■□□□□ 0.06
DDX55-212ENST00000544738 FBLP22087 321 aaKnown RBP15.41■□□□□ 0.06
DDX55-212ENST00000544738 RGS4P49798 205 aa15.41■□□□□ 0.06
DDX55-212ENST00000544738 KCNK10P57789 538 aa15.41■□□□□ 0.06
DDX55-212ENST00000544738 KRTAP10-9P60411 292 aa15.41■□□□□ 0.06
DDX55-212ENST00000544738 KLC1Q07866 573 aa15.41■□□□□ 0.06
DDX55-212ENST00000544738 CRYMQ14894 314 aa15.41■□□□□ 0.06
DDX55-212ENST00000544738 ZNF630Q2M218 657 aaPredicted RBP15.41■□□□□ 0.06
DDX55-212ENST00000544738 THEMIS2Q5TEJ8 643 aa15.41■□□□□ 0.06
DDX55-212ENST00000544738 AGAP7PQ5VUJ5 663 aa15.41■□□□□ 0.06
DDX55-212ENST00000544738 SHISA6Q6ZSJ9 500 aa15.41■□□□□ 0.06
DDX55-212ENST00000544738 UBE2R2Q712K3 238 aaPredicted RBP15.41■□□□□ 0.06
DDX55-212ENST00000544738 TMEM151BQ8IW70 566 aa15.41■□□□□ 0.06
DDX55-212ENST00000544738 PALM2Q8IXS6 379 aa15.41■□□□□ 0.06
DDX55-212ENST00000544738 ZNF295-AS1Q8N0V1 137 aa15.41■□□□□ 0.06
DDX55-212ENST00000544738 CSNK1A1LQ8N752 337 aa15.41■□□□□ 0.06
DDX55-212ENST00000544738 C2CD4AQ8NCU7 369 aaPredicted RBP15.41■□□□□ 0.06
DDX55-212ENST00000544738 PPFIBP2Q8ND30 876 aa15.41■□□□□ 0.06
DDX55-212ENST00000544738 C10orf90Q96M02 699 aa15.41■□□□□ 0.06
DDX55-212ENST00000544738 AGAP4Q96P64 663 aa15.41■□□□□ 0.06
DDX55-212ENST00000544738 OR2A5Q96R48 311 aa15.41■□□□□ 0.06
DDX55-212ENST00000544738 CRB3Q9BUF7 120 aa15.41■□□□□ 0.06
DDX55-212ENST00000544738 DDX47Q9H0S4 455 aaKnown RBP15.41■□□□□ 0.06
DDX55-212ENST00000544738 TAS2R13Q9NYV9 303 aa15.41■□□□□ 0.06
DDX55-212ENST00000544738 SUCOQ9UBS9 1254 aaKnown RBP15.41■□□□□ 0.06
DDX55-212ENST00000544738 TRMT6Q9UJA5 497 aaKnown RBP15.41■□□□□ 0.06
DDX55-212ENST00000544738 IGLV3-12A0A075B6K2 115 aa15.4■□□□□ 0.06
DDX55-212ENST00000544738 A0A1B0GTL3 188 aa15.4■□□□□ 0.06
DDX55-212ENST00000544738 F7P08709 466 aaPredicted RBP15.4■□□□□ 0.06
DDX55-212ENST00000544738 TSFMP43897 325 aaKnown RBP15.4■□□□□ 0.06
DDX55-212ENST00000544738 MPP1Q00013 466 aa15.4■□□□□ 0.06
DDX55-212ENST00000544738 DSG2Q14126 1118 aa15.4■□□□□ 0.06
DDX55-212ENST00000544738 ZNF169Q14929 603 aaPredicted RBP15.4■□□□□ 0.06
DDX55-212ENST00000544738 SPANXN3Q5MJ09 141 aa15.4■□□□□ 0.06
DDX55-212ENST00000544738 FAM180AQ6UWF9 173 aa15.4■□□□□ 0.06
DDX55-212ENST00000544738 BNC2Q6ZN30 1099 aaPredicted RBP15.4■□□□□ 0.06
DDX55-212ENST00000544738 KIAA0408Q6ZU52 694 aa15.4■□□□□ 0.06
DDX55-212ENST00000544738 ADCK2Q7Z695 626 aa15.4■□□□□ 0.06
DDX55-212ENST00000544738 CPNE9Q8IYJ1 553 aa15.4■□□□□ 0.06
DDX55-212ENST00000544738 OR11G2Q8NGC1 345 aa15.4■□□□□ 0.06
DDX55-212ENST00000544738 PPP4R1Q8TF05 950 aa15.4■□□□□ 0.06
DDX55-212ENST00000544738 CCDC138Q96M89 665 aa15.4■□□□□ 0.06
DDX55-212ENST00000544738 LHPPQ9H008 270 aa15.4■□□□□ 0.06
DDX55-212ENST00000544738 PCBD2Q9H0N5 130 aa15.4■□□□□ 0.06
DDX55-212ENST00000544738 OLAHQ9NV23 265 aa15.4■□□□□ 0.06
DDX55-212ENST00000544738 C14orf105Q9NVL8 296 aa15.4■□□□□ 0.06
DDX55-212ENST00000544738 TRMT1Q9NXH9 659 aaKnown RBP15.4■□□□□ 0.06
DDX55-212ENST00000544738 RUVBL1Q9Y265 456 aaKnown RBP15.4■□□□□ 0.06
DDX55-212ENST00000544738 MAP1AP78559 2803 aaPredicted RBP15.39■□□□□ 0.05
DDX55-212ENST00000544738 TRGV8A0A0C4DH27 118 aa15.39■□□□□ 0.05
DDX55-212ENST00000544738 PCDH17O14917 1159 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms