RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 KLHL25Q9H0H3 589 aa12.55□□□□□ -0.4
DDX11-227ENST00000544652 SPNS1Q9H2V7 528 aa12.55□□□□□ -0.4
DDX11-227ENST00000544652 NT5DC2Q9H857 520 aa12.55□□□□□ -0.4
DDX11-227ENST00000544652 PDE7BQ9NP56 450 aa12.55□□□□□ -0.4
DDX11-227ENST00000544652 ACSS2Q9NR19 701 aa12.55□□□□□ -0.4
DDX11-227ENST00000544652 GEMIN8Q9NWZ8 242 aaKnown RBP12.55□□□□□ -0.4
DDX11-227ENST00000544652 SIDT1Q9NXL6 827 aaKnown RBP12.55□□□□□ -0.4
DDX11-227ENST00000544652 FAM53CQ9NYF3 392 aa12.55□□□□□ -0.4
DDX11-227ENST00000544652 ZNF225Q9UK10 706 aa12.55□□□□□ -0.4
DDX11-227ENST00000544652 KCNE1BA0A087WTH5 132 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 A0A1B0GTL3 188 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 TRBC2A0A5B9 178 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 PPP6CO00743 305 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 UBFD1O14562 309 aaKnown RBP12.54□□□□□ -0.4
DDX11-227ENST00000544652 CTSVO60911 334 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 CLDN9O95484 217 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 OTCP00480 354 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 SERPINE1P05121 402 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 CXCR2P25025 360 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 GRK2P25098 689 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 VARSP26640 1264 aaKnown RBP12.54□□□□□ -0.4
DDX11-227ENST00000544652 ARRB2P32121 409 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 HNF4AP41235 474 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 SEPHS1P49903 392 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 CCNG1P51959 295 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 PKNOX1P55347 436 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 CLDN6P56747 220 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 IRF8Q02556 426 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 LAPTM5Q13571 262 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 RCN2Q14257 317 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 CHI3L2Q15782 390 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 XKR6Q5GH73 641 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 ZC3H12BQ5HYM0 836 aaKnown RBP12.54□□□□□ -0.4
DDX11-227ENST00000544652 CFAP157Q5JU67 520 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 ATG14Q6ZNE5 492 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 ZCCHC23Q6ZST2 131 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 LAS2Q8IYD9 372 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 LSMEM2Q8N112 164 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 CCNYL1Q8N7R7 359 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 BMPERQ8N8U9 685 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 AGBL5Q8NDL9 886 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 OR4F6Q8NGB9 312 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 TRPC4APQ8TEL6 797 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 AGAP11Q8TF27 550 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 MAGEB10Q96LZ2 347 aaPredicted RBP12.54□□□□□ -0.4
DDX11-227ENST00000544652 PAIP2Q9BPZ3 127 aaKnown RBP12.54□□□□□ -0.4
DDX11-227ENST00000544652 ZFYVE21Q9BQ24 234 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 AIF1LQ9BQI0 150 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 SYNPO2LQ9H987 977 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 INTS9Q9NV88 658 aaKnown RBP12.54□□□□□ -0.4
DDX11-227ENST00000544652 TRPS1Q9UHF7 1281 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 TSC22D4Q9Y3Q8 395 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 NUP210LQ5VU65 1888 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 CCDC88CQ9P219 2028 aa12.54□□□□□ -0.4
DDX11-227ENST00000544652 CEP250Q9BV73 2442 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 TMEM114B3SHH9 223 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 H0YIV9 168 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 H3BMH7 237 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 KLF11O14901 512 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 HAT1O14929 419 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 HCRTR1O43613 425 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 LCMT2O60294 686 aaKnown RBP12.53□□□□□ -0.4
DDX11-227ENST00000544652 SNUPNO95149 360 aaKnown RBP12.53□□□□□ -0.4
DDX11-227ENST00000544652 ESRRBO95718 433 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 JUPP14923 745 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 TSPAN8P19075 237 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 BGNP21810 368 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 GSTM2P28161 218 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 GRK3P35626 688 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 SCTRP47872 440 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 ERVPABLB-1P60509 514 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 RPS15AP62244 130 aaKnown RBP12.53□□□□□ -0.4
DDX11-227ENST00000544652 SH3BP2P78314 561 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 MEF2AQ02078 507 aaPredicted RBP12.53□□□□□ -0.4
DDX11-227ENST00000544652 EIF3IQ13347 325 aaKnown RBP12.53□□□□□ -0.4
DDX11-227ENST00000544652 SLBPQ14493 270 aaKnown RBP eCLIP12.53□□□□□ -0.4
DDX11-227ENST00000544652 PAGE2BQ5JRK9 111 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 TMTC4Q5T4D3 741 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 LETMD1Q6P1Q0 360 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 MILR1Q7Z6M3 343 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 SYVN1Q86TM6 617 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 TRIM42Q8IWZ5 723 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 KRT78Q8N1N4 520 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 MFSD9Q8NBP5 474 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 ZNF740Q8NDX6 193 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 ATP6V1E2Q96A05 226 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 THAP11Q96EK4 314 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 SEC16BQ96JE7 1060 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 ZNF285Q96NJ3 590 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 CDK15Q96Q40 435 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 OR2A5Q96R48 311 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 CMKLR1Q99788 373 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 STRADBQ9C0K7 418 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 ACTR8Q9H981 624 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 SOHLH2Q9NX45 425 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 ZNF490Q9ULM2 529 aaPredicted RBP12.53□□□□□ -0.4
DDX11-227ENST00000544652 PLCL2Q9UPR0 1127 aa12.53□□□□□ -0.4
DDX11-227ENST00000544652 SDK2Q58EX2 2172 aa12.52□□□□□ -0.4
DDX11-227ENST00000544652 SPEGQ15772 3267 aa12.52□□□□□ -0.41
DDX11-227ENST00000544652 CCDC187A0A096LP49 1063 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms