RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 A6NCN8 305 aa19.08■□□□□ 0.64
COPS7A-218ENST00000543939 ACTR1BP42025 376 aa19.08■□□□□ 0.64
COPS7A-218ENST00000543939 ACTR1AP61163 376 aa19.08■□□□□ 0.64
COPS7A-218ENST00000543939 SLC34A1Q06495 639 aa19.08■□□□□ 0.64
COPS7A-218ENST00000543939 TRAP1Q12931 704 aaKnown RBP19.08■□□□□ 0.64
COPS7A-218ENST00000543939 PWP1Q13610 501 aa19.08■□□□□ 0.64
COPS7A-218ENST00000543939 SPATS1Q496A3 300 aa19.08■□□□□ 0.64
COPS7A-218ENST00000543939 SPIN4Q56A73 249 aa19.08■□□□□ 0.64
COPS7A-218ENST00000543939 NRROSQ86YC3 692 aa19.08■□□□□ 0.64
COPS7A-218ENST00000543939 OR4K1Q8NGD4 311 aa19.08■□□□□ 0.64
COPS7A-218ENST00000543939 DNAJB14Q8TBM8 379 aa19.08■□□□□ 0.64
COPS7A-218ENST00000543939 AIF1LQ9BQI0 150 aa19.08■□□□□ 0.64
COPS7A-218ENST00000543939 NMRK1Q9NWW6 199 aa19.08■□□□□ 0.64
COPS7A-218ENST00000543939 SIRT5Q9NXA8 310 aa19.08■□□□□ 0.64
COPS7A-218ENST00000543939 PRMT3O60678 531 aa19.07■□□□□ 0.64
COPS7A-218ENST00000543939 SH3BGRLO75368 114 aa19.07■□□□□ 0.64
COPS7A-218ENST00000543939 MYO1DO94832 1006 aa19.07■□□□□ 0.64
COPS7A-218ENST00000543939 HSD17B1P14061 328 aa19.07■□□□□ 0.64
COPS7A-218ENST00000543939 CXCR2P25025 360 aa19.07■□□□□ 0.64
COPS7A-218ENST00000543939 NDUFS1P28331 727 aa19.07■□□□□ 0.64
COPS7A-218ENST00000543939 CCR8P51685 355 aa19.07■□□□□ 0.64
COPS7A-218ENST00000543939 REEP5Q00765 189 aa19.07■□□□□ 0.64
COPS7A-218ENST00000543939 TCEA2Q15560 299 aa19.07■□□□□ 0.64
COPS7A-218ENST00000543939 PRPF38BQ5VTL8 546 aaKnown RBP19.07■□□□□ 0.64
COPS7A-218ENST00000543939 ICE2Q659A1 982 aa19.07■□□□□ 0.64
COPS7A-218ENST00000543939 NANOGP8Q6NSW7 305 aa19.07■□□□□ 0.64
COPS7A-218ENST00000543939 SLC30A9Q6PML9 568 aa19.07■□□□□ 0.64
COPS7A-218ENST00000543939 VN1R5Q7Z5H4 357 aa19.07■□□□□ 0.64
COPS7A-218ENST00000543939 SYT12Q8IV01 421 aa19.07■□□□□ 0.64
COPS7A-218ENST00000543939 OR2A1Q8NGT9 310 aa19.07■□□□□ 0.64
COPS7A-218ENST00000543939 PYDC1Q8WXC3 89 aa19.07■□□□□ 0.64
COPS7A-218ENST00000543939 GTF2H4Q92759 462 aa19.07■□□□□ 0.64
COPS7A-218ENST00000543939 CHRDQ9H2X0 955 aa19.07■□□□□ 0.64
COPS7A-218ENST00000543939 RHBGQ9H310 441 aa19.07■□□□□ 0.64
COPS7A-218ENST00000543939 NT5DC2Q9H857 520 aa19.07■□□□□ 0.64
COPS7A-218ENST00000543939 NANOGQ9H9S0 305 aa19.07■□□□□ 0.64
COPS7A-218ENST00000543939 ZNF624Q9P2J8 865 aaPredicted RBP19.07■□□□□ 0.64
COPS7A-218ENST00000543939 ARHGEF17Q96PE2 2063 aaPredicted RBP19.07■□□□□ 0.64
COPS7A-218ENST00000543939 C15orf38-AP3S2A0A0A6YYH1 394 aa19.06■□□□□ 0.64
COPS7A-218ENST00000543939 PRICKLE3O43900 615 aaPredicted RBP19.06■□□□□ 0.64
COPS7A-218ENST00000543939 KDM1AO60341 852 aa19.06■□□□□ 0.64
COPS7A-218ENST00000543939 TNFP01375 233 aa19.06■□□□□ 0.64
COPS7A-218ENST00000543939 ANPEPP15144 967 aa19.06■□□□□ 0.64
COPS7A-218ENST00000543939 PRPS1L1P21108 318 aa19.06■□□□□ 0.64
COPS7A-218ENST00000543939 GCKP35557 465 aa19.06■□□□□ 0.64
COPS7A-218ENST00000543939 C21orf58P58505 322 aa19.06■□□□□ 0.64
COPS7A-218ENST00000543939 PHC1P78364 1004 aa19.06■□□□□ 0.64
COPS7A-218ENST00000543939 PHEXP78562 749 aa19.06■□□□□ 0.64
COPS7A-218ENST00000543939 SF1Q15637 639 aaKnown RBP19.06■□□□□ 0.64
COPS7A-218ENST00000543939 MAPKAPK3Q16644 382 aa19.06■□□□□ 0.64
COPS7A-218ENST00000543939 C6orf10Q5SRN2 563 aa19.06■□□□□ 0.64
COPS7A-218ENST00000543939 GALNT18Q6P9A2 607 aa19.06■□□□□ 0.64
COPS7A-218ENST00000543939 ARPINQ7Z6K5 226 aa19.06■□□□□ 0.64
COPS7A-218ENST00000543939 BHLHE22Q8NFJ8 381 aaPredicted RBP19.06■□□□□ 0.64
COPS7A-218ENST00000543939 OR52E6Q96RD3 313 aa19.06■□□□□ 0.64
COPS7A-218ENST00000543939 PITHD1Q9GZP4 211 aaPredicted RBP19.06■□□□□ 0.64
COPS7A-218ENST00000543939 PCDHAC1Q9H158 963 aa19.06■□□□□ 0.64
COPS7A-218ENST00000543939 TBC1D17Q9HA65 648 aa19.06■□□□□ 0.64
COPS7A-218ENST00000543939 GMPR2Q9P2T1 348 aaKnown RBP19.06■□□□□ 0.64
COPS7A-218ENST00000543939 STOML1Q9UBI4 398 aa19.06■□□□□ 0.64
COPS7A-218ENST00000543939 PCDHB11Q9Y5F2 797 aa19.06■□□□□ 0.64
COPS7A-218ENST00000543939 TGFB1P01137 390 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 TIA1P31483 386 aaKnown RBP eCLIP19.05■□□□□ 0.64
COPS7A-218ENST00000543939 S100A3P33764 101 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 PRDX1Q06830 199 aaKnown RBP19.05■□□□□ 0.64
COPS7A-218ENST00000543939 EIF2B5Q13144 721 aaKnown RBP19.05■□□□□ 0.64
COPS7A-218ENST00000543939 RABL3Q5HYI8 236 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 SPEM1Q8N4L4 309 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 CLDN23Q96B33 292 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 CGREF1Q99674 301 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 TRIM8Q9BZR9 551 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 PRM3Q9NNZ6 103 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 ADGRE2Q9UHX3 823 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 ANGPTL2Q9UKU9 493 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 NEUROG3Q9Y4Z2 214 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 TRIOO75962 3097 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 SNRNP200O75643 2136 aaKnown RBP19.05■□□□□ 0.64
COPS7A-218ENST00000543939 SPTY2D1-AS1A0A0U1RR47 76 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 C19orf67A6NJJ6 358 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 H7BY64 318 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 LRATO95237 230 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 KCNH1O95259 989 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 THEGLP0DJG4 465 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 F3P13726 295 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 PTDSS1P48651 473 aaKnown RBP19.05■□□□□ 0.64
COPS7A-218ENST00000543939 EEFSECP57772 596 aaKnown RBP19.05■□□□□ 0.64
COPS7A-218ENST00000543939 RBBP5Q15291 538 aaKnown RBP19.05■□□□□ 0.64
COPS7A-218ENST00000543939 ARMCX6Q7L4S7 300 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.05■□□□□ 0.64
COPS7A-218ENST00000543939 PHACTR4Q8IZ21 702 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 GPR156Q8NFN8 814 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 FAM174AQ8TBP5 190 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 GPBAR1Q8TDU6 330 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 SNX19Q92543 992 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 PRAP1Q96NZ9 151 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 OR51B5Q9H339 312 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 CAAP1Q9H8G2 361 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 SLCO1B1Q9Y6L6 691 aa19.05■□□□□ 0.64
COPS7A-218ENST00000543939 IGKV1-8A0A0C4DH67 115 aa19.04■□□□□ 0.64
COPS7A-218ENST00000543939 H3BNX3 289 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms