RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 TMEM120BA0PK00 339 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 FAM149AA5PLN7 773 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 NVLO15381 856 aaKnown RBP11.67□□□□□ -0.54
DDX55-210ENST00000543016 SUPT7LO94864 414 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 SIX3O95343 332 aaPredicted RBP11.67□□□□□ -0.54
DDX55-210ENST00000543016 HBQ1P09105 142 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 EBLN1P0CF75 366 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 DHRS4L1P0CG22 281 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 FOLR1P15328 257 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 HPDP32754 393 aaPredicted RBP11.67□□□□□ -0.54
DDX55-210ENST00000543016 GABRA4P48169 554 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 SERPINB4P48594 390 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 CCNG1P51959 295 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 ITGA1P56199 1179 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 CLDN6P56747 220 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 GABREP78334 506 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 REEP5Q00765 189 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 CLCQ05315 142 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 FOXM1Q08050 763 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 CHIT1Q13231 466 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 UNC50Q53HI1 259 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 XKR6Q5GH73 641 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 C3orf38Q5JPI3 329 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 CFAP157Q5JU67 520 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 GOLGA7Q7Z5G4 137 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 FAM20CQ8IXL6 584 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 L3MBTL4Q8NA19 623 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 MFSD9Q8NBP5 474 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 TRPV3Q8NET8 790 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 ATP6V1E2Q96A05 226 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 ESAMQ96AP7 390 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 ZNF501Q96CX3 271 aaPredicted RBP11.67□□□□□ -0.54
DDX55-210ENST00000543016 REPS1Q96D71 796 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 CNDP1Q96KN2 507 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 SLC46A1Q96NT5 459 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 OR2A5Q96R48 311 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 OR6C1Q96RD1 312 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 SELENOSQ9BQE4 189 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 NLNQ9BYT8 704 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 DRC3Q9H069 523 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 ACTR8Q9H981 624 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 FAM60AQ9NP50 221 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 OCIAD1Q9NX40 245 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 SLC17A7Q9P2U7 560 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 PISDQ9UG56 409 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 ASB1Q9Y576 335 aa11.67□□□□□ -0.54
DDX55-210ENST00000543016 COL27A1Q8IZC6 1860 aaPredicted RBP11.67□□□□□ -0.54
DDX55-210ENST00000543016 CFAP54Q96N23 3096 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 E7EQ34 232 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 ZSCAN9O15535 394 aaPredicted RBP11.66□□□□□ -0.54
DDX55-210ENST00000543016 CTSVO60911 334 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 OR2B3O76000 313 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 TNFSF15O95150 251 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 CLDN9O95484 217 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 BPGMP07738 259 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 CCL4P13236 92 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 EPORP19235 508 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 SCTRP47872 440 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 ARSFP54793 590 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 NAGLUP54802 743 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 PKNOX1P55347 436 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 ERVPABLB-1P60509 514 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 YBX1P67809 324 aaKnown RBP11.66□□□□□ -0.54
DDX55-210ENST00000543016 SH3BP2P78314 561 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 GALNT1Q10472 559 aaPredicted RBP11.66□□□□□ -0.54
DDX55-210ENST00000543016 LCP2Q13094 533 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 PWP1Q13610 501 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 DOC2AQ14183 400 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 GRM7Q14831 915 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 PCLAFQ15004 111 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 FAM214AQ32MH5 1076 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 GGTA1PQ4G0N0 100 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 FBXO48Q5FWF7 155 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 CATSPEREQ5SY80 951 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 HHATQ5VTY9 493 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 GARNL3Q5VVW2 1013 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 GRHL2Q6ISB3 625 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 TMIGD1Q6UXZ0 262 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 NUDCD3Q8IVD9 361 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 C10orf107Q8IVU9 208 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 TRIM42Q8IWZ5 723 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 KIRREL3Q8IZU9 778 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 CAMKVQ8NCB2 501 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 PRR11Q96HE9 360 aaPredicted RBP11.66□□□□□ -0.54
DDX55-210ENST00000543016 ZNF578Q96N58 590 aaPredicted RBP11.66□□□□□ -0.54
DDX55-210ENST00000543016 TMEM237Q96Q45 408 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 ZNF382Q96SR6 550 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 KLHL25Q9H0H3 589 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 NOL11Q9H8H0 719 aaKnown RBP11.66□□□□□ -0.54
DDX55-210ENST00000543016 EML4Q9HC35 981 aaKnown RBP11.66□□□□□ -0.54
DDX55-210ENST00000543016 THSD1Q9NS62 852 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 GEMIN8Q9NWZ8 242 aaKnown RBP11.66□□□□□ -0.54
DDX55-210ENST00000543016 ZFP69BQ9UJL9 534 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 KLK13Q9UKR3 277 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 ACSL6Q9UKU0 697 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 ANGPTL2Q9UKU9 493 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 SRPK3Q9UPE1 567 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 SH2B3Q9UQQ2 575 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 KLHL20Q9Y2M5 609 aa11.66□□□□□ -0.54
DDX55-210ENST00000543016 PCDHB3Q9Y5E6 796 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms