RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 EEDO75530 441 aaKnown RBP15.61■□□□□ 0.09
VARS2-212ENST00000542001 SRP54P61011 504 aaKnown RBP15.61■□□□□ 0.09
VARS2-212ENST00000542001 CSNK2BP67870 215 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 DEFB103AP81534 67 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 MRPL28Q13084 256 aaKnown RBP15.61■□□□□ 0.09
VARS2-212ENST00000542001 SCARB2Q14108 478 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 IFI44LQ53G44 452 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 RAD51AP1Q96B01 352 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 TIFAQ96CG3 184 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 PRAP1Q96NZ9 151 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 THG1LQ9NWX6 298 aaKnown RBP15.61■□□□□ 0.09
VARS2-212ENST00000542001 MAT2BQ9NZL9 334 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 PSME2Q9UL46 239 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 RASAL1O95294 804 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 CLTBP09497 229 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 ETFAP13804 333 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 TPTEP56180 551 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 Q6ZSR9 355 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 METTL3Q86U44 580 aaKnown RBP15.61■□□□□ 0.09
VARS2-212ENST00000542001 OOSP2Q86WS3 158 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 FAM86B1Q8N7N1 296 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 TMEM102Q8N9M5 508 aaPredicted RBP15.61■□□□□ 0.09
VARS2-212ENST00000542001 ZNF296Q8WUU4 475 aaPredicted RBP15.61■□□□□ 0.09
VARS2-212ENST00000542001 ZNF696Q9H7X3 374 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 NDOR1Q9UHB4 597 aa15.61■□□□□ 0.09
VARS2-212ENST00000542001 PAK4O96013 591 aaPredicted RBP15.6■□□□□ 0.09
VARS2-212ENST00000542001 ZNF26P17031 533 aaPredicted RBP15.6■□□□□ 0.09
VARS2-212ENST00000542001 ITGA2P17301 1181 aa15.6■□□□□ 0.09
VARS2-212ENST00000542001 DNAJB1P25685 340 aa15.6■□□□□ 0.09
VARS2-212ENST00000542001 IL12AP29459 219 aa15.6■□□□□ 0.09
VARS2-212ENST00000542001 ARL4DP49703 201 aa15.6■□□□□ 0.09
VARS2-212ENST00000542001 ABHD18Q0P651 414 aa15.6■□□□□ 0.09
VARS2-212ENST00000542001 KLHL35Q6PF15 583 aa15.6■□□□□ 0.09
VARS2-212ENST00000542001 METTL25Q8N6Q8 603 aa15.6■□□□□ 0.09
VARS2-212ENST00000542001 UXS1Q8NBZ7 420 aa15.6■□□□□ 0.09
VARS2-212ENST00000542001 AIF1LQ9BQI0 150 aa15.6■□□□□ 0.09
VARS2-212ENST00000542001 SNPHO15079 494 aa15.6■□□□□ 0.09
VARS2-212ENST00000542001 RPS17P08708 135 aaKnown RBP15.6■□□□□ 0.09
VARS2-212ENST00000542001 TAS2R41P59536 307 aa15.6■□□□□ 0.09
VARS2-212ENST00000542001 TIGD6Q17RP2 521 aa15.6■□□□□ 0.09
VARS2-212ENST00000542001 DUOXA1Q1HG43 343 aa15.6■□□□□ 0.09
VARS2-212ENST00000542001 Q6ZPB1 254 aaPredicted RBP15.6■□□□□ 0.09
VARS2-212ENST00000542001 DEPDC4Q8N2C3 294 aa15.6■□□□□ 0.09
VARS2-212ENST00000542001 SVOPLQ8N434 492 aa15.6■□□□□ 0.09
VARS2-212ENST00000542001 UBE2E3Q969T4 207 aa15.6■□□□□ 0.09
VARS2-212ENST00000542001 TBX5Q99593 518 aa15.6■□□□□ 0.09
VARS2-212ENST00000542001 CDV3Q9UKY7 258 aaKnown RBP15.6■□□□□ 0.09
VARS2-212ENST00000542001 COL24A1Q17RW2 1714 aa15.6■□□□□ 0.09
VARS2-212ENST00000542001 MROH6A6NGR9 719 aa15.6■□□□□ 0.09
VARS2-212ENST00000542001 MMP2P08253 660 aa15.6■□□□□ 0.09
VARS2-212ENST00000542001 HSD17B1P14061 328 aa15.6■□□□□ 0.09
VARS2-212ENST00000542001 HPGDP15428 266 aa15.6■□□□□ 0.09
VARS2-212ENST00000542001 SMN1Q16637 294 aaKnown RBP15.6■□□□□ 0.09
VARS2-212ENST00000542001 LCN8Q6JVE9 175 aa15.6■□□□□ 0.09
VARS2-212ENST00000542001 RNF44Q7L0R7 432 aa15.6■□□□□ 0.09
VARS2-212ENST00000542001 CXorf40BQ96DE9 158 aa15.6■□□□□ 0.09
VARS2-212ENST00000542001 RSPH9Q9H1X1 276 aaPredicted RBP15.6■□□□□ 0.09
VARS2-212ENST00000542001 KAT8Q9H7Z6 458 aaKnown RBP15.6■□□□□ 0.09
VARS2-212ENST00000542001 DNAJC27Q9NZQ0 273 aa15.6■□□□□ 0.09
VARS2-212ENST00000542001 ASB3Q9Y575 518 aa15.6■□□□□ 0.09
VARS2-212ENST00000542001 OAS3Q9Y6K5 1087 aaKnown RBP15.6■□□□□ 0.09
VARS2-212ENST00000542001 TRBC2A0A5B9 178 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 WASH3PC4AMC7 463 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 E7EQ34 232 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 UGT2B17O75795 530 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 MT-ND2P03891 347 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 FGF4P08620 206 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 HTR1EP28566 365 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 KDELR2P33947 212 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 HK3P52790 923 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 MLLT10P55197 1068 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 NCS1P62166 190 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 ADAM17P78536 824 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 RCAN2Q14206 197 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 CYBRD1Q53TN4 286 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 TRIQKQ629K1 86 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 ERICH5Q6P6B1 374 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 CEACAM20Q6UY09 585 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 MEX3DQ86XN8 651 aaKnown RBP15.59■□□□□ 0.09
VARS2-212ENST00000542001 FAM20CQ8IXL6 584 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 LILRA3Q8N6C8 439 aaPredicted RBP15.59■□□□□ 0.09
VARS2-212ENST00000542001 PACRGLQ8N7B6 248 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 TMEM145Q8NBT3 493 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 ZFAND2BQ8WV99 257 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 TCEAL4Q96EI5 215 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 DMRTB1Q96MA1 342 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 HERC2P3Q9BVR0 1158 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 DNAAF2Q9NVR5 837 aaKnown RBP15.59■□□□□ 0.09
VARS2-212ENST00000542001 CLEC4EQ9ULY5 219 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 ADH1CP00326 375 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 RPN2P04844 631 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 MC1RQ01726 317 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 RAPSNQ13702 412 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 DCST1Q5T197 706 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 ZNF773Q6PK81 442 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 ANKFN1Q8N957 763 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 ENKURQ8TC29 256 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 DCSTAMPQ9H295 470 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 OCEL1Q9H607 264 aa15.59■□□□□ 0.09
VARS2-212ENST00000542001 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms