RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 ADAMTS14Q8WXS8 1223 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 P3H4Q92791 437 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 CENPTQ96BT3 561 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 HDAC11Q96DB2 347 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 ECHDC3Q96DC8 303 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 RBM41Q96IZ5 413 aaKnown RBP5.31□□□□□ -1.56
CPSF7-220ENST00000541963 CNDP2Q96KP4 475 aaKnown RBP5.31□□□□□ -1.56
CPSF7-220ENST00000541963 SEMA3CQ99985 751 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 WRAP53Q9BUR4 548 aaKnown RBP5.31□□□□□ -1.56
CPSF7-220ENST00000541963 ADGRE3Q9BY15 652 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 KRTAP4-8Q9BYQ9 185 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 USP29Q9HBJ7 922 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 NOD2Q9HC29 1040 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 FZD3Q9NPG1 666 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 NCKIPSDQ9NZQ3 722 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 SPASTQ9UBP0 616 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 DAPP1Q9UN19 280 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 RPL26L1Q9UNX3 145 aaKnown RBP5.31□□□□□ -1.56
CPSF7-220ENST00000541963 CA5BQ9Y2D0 317 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 TTLL3Q9Y4R7 772 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 PCDHGA1Q9Y5H4 931 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 HEY1Q9Y5J3 304 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 RAI2Q9Y5P3 530 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 CSNK1G3Q9Y6M4 447 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 TRPM6Q9BX84 2022 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 CFAP54Q96N23 3096 aa5.31□□□□□ -1.56
CPSF7-220ENST00000541963 GPR179Q6PRD1 2367 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 HACD1B0YJ81 288 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 E7EVH7 732 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 NPIPB8E9PQR5 432 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 TRAFD1O14545 582 aaPredicted RBP5.3□□□□□ -1.56
CPSF7-220ENST00000541963 SCAMP1O15126 338 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 RAD51BO15315 384 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 SPRY2O43597 315 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 CST8O60676 142 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 PGLSO95336 258 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 JCHAINP01591 159 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 CSF2P04141 144 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 PYGLP06737 847 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 HOXC4P09017 264 aaPredicted RBP5.3□□□□□ -1.56
CPSF7-220ENST00000541963 ALPIP09923 528 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 C6P13671 934 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 ZNF30P17039 623 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 CKMT2P17540 419 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 TGM2P21980 687 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 DGKAP23743 735 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 CTNNA2P26232 953 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 MMP12P39900 470 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 RGRP47804 291 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 PNLIPRP1P54315 467 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 RWDD2BP57060 319 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 PFN3P60673 137 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 MAXP61244 160 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 PPARDQ03181 441 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 GBE1Q04446 702 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 ABHD18Q0P651 414 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 PEX6Q13608 980 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 ELOCQ15369 112 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 SHBQ15464 509 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 CYP1B1Q16678 543 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 LRRC73Q5JTD7 316 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 ENPP7Q6UWV6 458 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 MACC1Q6ZN28 852 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 PEG10Q86TG7 708 aaKnown RBP5.3□□□□□ -1.56
CPSF7-220ENST00000541963 NT5DC3Q86UY8 548 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 KRTAP19-1Q8IUB9 90 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 KATNAL2Q8IYT4 538 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 PGBD5Q8N414 524 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 RNF10Q8N5U6 811 aaKnown RBP5.3□□□□□ -1.56
CPSF7-220ENST00000541963 UBL4BQ8N7F7 174 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 PLD5Q8N7P1 536 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 SPC24Q8NBT2 197 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 TFB1MQ8WVM0 346 aaKnown RBP5.3□□□□□ -1.56
CPSF7-220ENST00000541963 LINC00476Q8WZB0 136 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 LRRC45Q96CN5 670 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 HAUS1Q96CS2 278 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 SCRN2Q96FV2 425 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 VAT1Q99536 393 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 KLF6Q99612 283 aaPredicted RBP5.3□□□□□ -1.56
CPSF7-220ENST00000541963 IL12RB2Q99665 862 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 APOOQ9BUR5 198 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 SCNM1Q9BWG6 230 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 TSGA10Q9BZW7 698 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 FAM107BQ9H098 131 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 DUSP22Q9NRW4 184 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 NLGN3Q9NZ94 848 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 ITM2BQ9Y287 266 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 BTBD3Q9Y2F9 522 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 PPIL1Q9Y3C6 166 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 NEUROG3Q9Y4Z2 214 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 TMEM131Q92545 1883 aa5.3□□□□□ -1.56
CPSF7-220ENST00000541963 PCNX2A6NKB5 2137 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 RGSL1A5PLK6 1076 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 TMEM8BA6NDV4 472 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 GOLGA6L9A6NEM1 432 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 C3orf70A6NLC5 250 aaPredicted RBP5.29□□□□□ -1.56
CPSF7-220ENST00000541963 A8MX80 341 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 MIF4GDA9UHW6 222 aaKnown RBP5.29□□□□□ -1.56
CPSF7-220ENST00000541963 AQP9O43315 295 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 KRT86O43790 486 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms