RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 EFNA3P52797 238 aa25.35■■□□□ 1.65
CHFR-218ENST00000540963 SRSF11Q05519 484 aaKnown RBP25.35■■□□□ 1.65
CHFR-218ENST00000540963 ACER2Q5QJU3 275 aa25.35■■□□□ 1.65
CHFR-218ENST00000540963 ICE2Q659A1 982 aa25.35■■□□□ 1.65
CHFR-218ENST00000540963 CPEB2Q7Z5Q1 589 aaKnown RBP25.35■■□□□ 1.65
CHFR-218ENST00000540963 SYCE1Q8N0S2 351 aa25.35■■□□□ 1.65
CHFR-218ENST00000540963 CYTH2Q99418 400 aa25.35■■□□□ 1.65
CHFR-218ENST00000540963 VN1R1Q9GZP7 353 aa25.35■■□□□ 1.65
CHFR-218ENST00000540963 SYNPO2LQ9H987 977 aa25.35■■□□□ 1.65
CHFR-218ENST00000540963 C19orf84I3L1E1 186 aa25.34■■□□□ 1.65
CHFR-218ENST00000540963 CDK2AP1O14519 115 aa25.34■■□□□ 1.65
CHFR-218ENST00000540963 ADARP55265 1226 aaKnown RBP25.34■■□□□ 1.65
CHFR-218ENST00000540963 ABATP80404 500 aa25.34■■□□□ 1.65
CHFR-218ENST00000540963 ALDH6A1Q02252 535 aaKnown RBP25.34■■□□□ 1.65
CHFR-218ENST00000540963 OASLQ15646 514 aaKnown RBP25.34■■□□□ 1.65
CHFR-218ENST00000540963 SYT16Q17RD7 645 aa25.34■■□□□ 1.65
CHFR-218ENST00000540963 SUSD1Q6UWL2 747 aa25.34■■□□□ 1.65
CHFR-218ENST00000540963 BEST3Q8N1M1 668 aa25.34■■□□□ 1.65
CHFR-218ENST00000540963 ACBD4Q8NC06 268 aa25.34■■□□□ 1.65
CHFR-218ENST00000540963 PHF10Q8WUB8 498 aaKnown RBP25.34■■□□□ 1.65
CHFR-218ENST00000540963 SCMH1Q96GD3 660 aa25.34■■□□□ 1.65
CHFR-218ENST00000540963 BIRC8Q96P09 236 aa25.34■■□□□ 1.65
CHFR-218ENST00000540963 RAB6BQ9NRW1 208 aa25.34■■□□□ 1.65
CHFR-218ENST00000540963 TCRBV7S2A1N4TA0A589 114 aa25.33■■□□□ 1.65
CHFR-218ENST00000540963 A8MUI8 341 aa25.33■■□□□ 1.65
CHFR-218ENST00000540963 PSIP1O75475 530 aaKnown RBP25.33■■□□□ 1.65
CHFR-218ENST00000540963 WISP2O76076 250 aa25.33■■□□□ 1.65
CHFR-218ENST00000540963 APRTP07741 180 aa25.33■■□□□ 1.65
CHFR-218ENST00000540963 KIR3DL1P43629 444 aa25.33■■□□□ 1.65
CHFR-218ENST00000540963 AGTR2P50052 363 aa25.33■■□□□ 1.65
CHFR-218ENST00000540963 EIF3BP55884 814 aaKnown RBP25.33■■□□□ 1.65
CHFR-218ENST00000540963 TUBA3CQ13748 450 aa25.33■■□□□ 1.65
CHFR-218ENST00000540963 MEP1AQ16819 746 aa25.33■■□□□ 1.65
CHFR-218ENST00000540963 BTBD16Q32M84 506 aa25.33■■□□□ 1.65
CHFR-218ENST00000540963 EEF1AKMT2Q5JPI9 291 aaKnown RBP25.33■■□□□ 1.65
CHFR-218ENST00000540963 CTSL3PQ5NE16 218 aa25.33■■□□□ 1.65
CHFR-218ENST00000540963 RNF187Q5TA31 235 aaPredicted RBP25.33■■□□□ 1.65
CHFR-218ENST00000540963 TUBA3EQ6PEY2 450 aa25.33■■□□□ 1.65
CHFR-218ENST00000540963 CEP97Q8IW35 865 aa25.33■■□□□ 1.65
CHFR-218ENST00000540963 TMEM178AQ8NBL3 297 aa25.33■■□□□ 1.65
CHFR-218ENST00000540963 CHTF18Q8WVB6 975 aa25.33■■□□□ 1.65
CHFR-218ENST00000540963 EBNA1BP2Q99848 306 aaKnown RBP25.33■■□□□ 1.65
CHFR-218ENST00000540963 ENKD1Q9H0I2 346 aa25.33■■□□□ 1.65
CHFR-218ENST00000540963 TAC3Q9UHF0 121 aa25.33■■□□□ 1.65
CHFR-218ENST00000540963 PACSIN2Q9UNF0 486 aaPredicted RBP25.33■■□□□ 1.65
CHFR-218ENST00000540963 ARHGEF33A8MVX0 844 aa25.32■■□□□ 1.64
CHFR-218ENST00000540963 PFDN6O15212 129 aa25.32■■□□□ 1.64
CHFR-218ENST00000540963 LIASO43766 372 aa25.32■■□□□ 1.64
CHFR-218ENST00000540963 SEC24DO94855 1032 aaPredicted RBP25.32■■□□□ 1.64
CHFR-218ENST00000540963 IFNB1P01574 187 aa25.32■■□□□ 1.64
CHFR-218ENST00000540963 CD46P15529 392 aa25.32■■□□□ 1.64
CHFR-218ENST00000540963 EEF1DP29692 281 aaKnown RBP25.32■■□□□ 1.64
CHFR-218ENST00000540963 PTK6Q13882 451 aa25.32■■□□□ 1.64
CHFR-218ENST00000540963 EXT1Q16394 746 aa25.32■■□□□ 1.64
CHFR-218ENST00000540963 PCGF5Q86SE9 256 aa25.32■■□□□ 1.64
CHFR-218ENST00000540963 TCF12Q99081 682 aa25.32■■□□□ 1.64
CHFR-218ENST00000540963 UTP23Q9BRU9 249 aaKnown RBP25.32■■□□□ 1.64
CHFR-218ENST00000540963 IL22Q9GZX6 179 aa25.32■■□□□ 1.64
CHFR-218ENST00000540963 MCCC2Q9HCC0 563 aa25.32■■□□□ 1.64
CHFR-218ENST00000540963 PCYOX1Q9UHG3 505 aa25.32■■□□□ 1.64
CHFR-218ENST00000540963 AP3B1O00203 1094 aa25.31■■□□□ 1.64
CHFR-218ENST00000540963 NSA2O95478 260 aaKnown RBP25.31■■□□□ 1.64
CHFR-218ENST00000540963 ESR1P03372 595 aa25.31■■□□□ 1.64
CHFR-218ENST00000540963 CATP04040 527 aaKnown RBP25.31■■□□□ 1.64
CHFR-218ENST00000540963 PNLIPRP1P54315 467 aa25.31■■□□□ 1.64
CHFR-218ENST00000540963 MAT1AQ00266 395 aaKnown RBP25.31■■□□□ 1.64
CHFR-218ENST00000540963 CDSNQ15517 529 aa25.31■■□□□ 1.64
CHFR-218ENST00000540963 MRNIPQ6NTE8 343 aa25.31■■□□□ 1.64
CHFR-218ENST00000540963 SDCCAG8Q86SQ7 713 aaPredicted RBP25.31■■□□□ 1.64
CHFR-218ENST00000540963 CDH24Q86UP0 819 aa25.31■■□□□ 1.64
CHFR-218ENST00000540963 EID3Q8N140 333 aa25.31■■□□□ 1.64
CHFR-218ENST00000540963 HORMAD2Q8N7B1 307 aa25.31■■□□□ 1.64
CHFR-218ENST00000540963 FAM98AQ8NCA5 519 aaKnown RBP25.31■■□□□ 1.64
CHFR-218ENST00000540963 M1APQ8TC57 530 aa25.31■■□□□ 1.64
CHFR-218ENST00000540963 MCOLN3Q8TDD5 553 aa25.31■■□□□ 1.64
CHFR-218ENST00000540963 ATG4AQ8WYN0 398 aa25.31■■□□□ 1.64
CHFR-218ENST00000540963 FRMD6Q96NE9 622 aa25.31■■□□□ 1.64
CHFR-218ENST00000540963 SIGLEC12Q96PQ1 595 aa25.31■■□□□ 1.64
CHFR-218ENST00000540963 BAG1Q99933 345 aaPredicted RBP25.31■■□□□ 1.64
CHFR-218ENST00000540963 DESI2Q9BSY9 194 aa25.31■■□□□ 1.64
CHFR-218ENST00000540963 PAK5Q9P286 719 aa25.31■■□□□ 1.64
CHFR-218ENST00000540963 NF1P21359 2839 aa25.3■■□□□ 1.64
CHFR-218ENST00000540963 FAM227AF5H4B4 570 aa25.3■■□□□ 1.64
CHFR-218ENST00000540963 CD96P40200 585 aa25.3■■□□□ 1.64
CHFR-218ENST00000540963 OR1C1Q15619 314 aa25.3■■□□□ 1.64
CHFR-218ENST00000540963 TYSND1Q2T9J0 566 aa25.3■■□□□ 1.64
CHFR-218ENST00000540963 LGI4Q8N135 537 aa25.3■■□□□ 1.64
CHFR-218ENST00000540963 FBXO15Q8NCQ5 510 aaPredicted RBP25.3■■□□□ 1.64
CHFR-218ENST00000540963 LPGAT1Q92604 370 aa25.3■■□□□ 1.64
CHFR-218ENST00000540963 TREX2Q9BQ50 279 aaPredicted RBP25.3■■□□□ 1.64
CHFR-218ENST00000540963 KCNK13Q9HB14 408 aa25.3■■□□□ 1.64
CHFR-218ENST00000540963 MMP25Q9NPA2 562 aa25.3■■□□□ 1.64
CHFR-218ENST00000540963 EIF2B3Q9NR50 452 aaKnown RBP25.3■■□□□ 1.64
CHFR-218ENST00000540963 MTORP42345 2549 aa25.29■■□□□ 1.64
CHFR-218ENST00000540963 E9PLN8 166 aa25.29■■□□□ 1.64
CHFR-218ENST00000540963 P2RX6O15547 441 aa25.29■■□□□ 1.64
CHFR-218ENST00000540963 ASNA1O43681 348 aa25.29■■□□□ 1.64
CHFR-218ENST00000540963 KRTAP10-9P60411 292 aa25.29■■□□□ 1.64
CHFR-218ENST00000540963 LANCL3Q6ZV70 420 aa25.29■■□□□ 1.64
CHFR-218ENST00000540963 CRLF3Q8IUI8 442 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms