RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 NELL1Q92832 810 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 HPS1Q92902 700 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 TCEAL4Q96EI5 215 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 NTMT1Q9BV86 223 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 KCNH6Q9H252 994 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 MARCH7Q9H992 704 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 DNAJC11Q9NVH1 559 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 ZDHHC3Q9NYG2 299 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 SPASTQ9UBP0 616 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 COL4A4P53420 1690 aaPredicted RBP13.66□□□□□ -0.22
INO80E-203ENST00000540562 TRIOO75962 3097 aa13.65□□□□□ -0.22
INO80E-203ENST00000540562 A0A0G2JN53 185 aa13.65□□□□□ -0.22
INO80E-203ENST00000540562 SMIM30A4D0T7 59 aa13.65□□□□□ -0.22
INO80E-203ENST00000540562 RFPL2O75678 378 aa13.65□□□□□ -0.22
INO80E-203ENST00000540562 URODP06132 367 aa13.65□□□□□ -0.22
INO80E-203ENST00000540562 AMD1P17707 334 aa13.65□□□□□ -0.22
INO80E-203ENST00000540562 PTPN6P29350 595 aa13.65□□□□□ -0.22
INO80E-203ENST00000540562 CLCA4Q14CN2 919 aa13.65□□□□□ -0.22
INO80E-203ENST00000540562 VMACQ2NL98 169 aa13.65□□□□□ -0.22
INO80E-203ENST00000540562 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.65□□□□□ -0.22
INO80E-203ENST00000540562 USP45Q70EL2 814 aa13.65□□□□□ -0.22
INO80E-203ENST00000540562 P3H2Q8IVL5 708 aa13.65□□□□□ -0.22
INO80E-203ENST00000540562 CHPFQ8IZ52 775 aa13.65□□□□□ -0.22
INO80E-203ENST00000540562 LEMD2Q8NC56 503 aa13.65□□□□□ -0.22
INO80E-203ENST00000540562 PDLIM5Q96HC4 596 aaKnown RBP13.65□□□□□ -0.22
INO80E-203ENST00000540562 CWH43Q9H720 699 aa13.65□□□□□ -0.22
INO80E-203ENST00000540562 ERN1O75460 977 aaKnown RBP13.65□□□□□ -0.22
INO80E-203ENST00000540562 NPPAP01160 153 aa13.65□□□□□ -0.22
INO80E-203ENST00000540562 BMP4P12644 408 aa13.65□□□□□ -0.22
INO80E-203ENST00000540562 FEN1P39748 380 aaKnown RBP13.65□□□□□ -0.22
INO80E-203ENST00000540562 CSNK1DP48730 415 aa13.65□□□□□ -0.22
INO80E-203ENST00000540562 CDKN3Q16667 212 aa13.65□□□□□ -0.22
INO80E-203ENST00000540562 ZNF740Q8NDX6 193 aa13.65□□□□□ -0.22
INO80E-203ENST00000540562 ING5Q8WYH8 240 aa13.65□□□□□ -0.22
INO80E-203ENST00000540562 MRPS31Q92665 395 aaKnown RBP13.65□□□□□ -0.22
INO80E-203ENST00000540562 DNASE1L2Q92874 299 aa13.65□□□□□ -0.22
INO80E-203ENST00000540562 MUL1Q969V5 352 aa13.65□□□□□ -0.22
INO80E-203ENST00000540562 GPR83Q9NYM4 423 aa13.65□□□□□ -0.22
INO80E-203ENST00000540562 TRPS1Q9UHF7 1281 aa13.65□□□□□ -0.22
INO80E-203ENST00000540562 ENPP5Q9UJA9 477 aa13.65□□□□□ -0.22
INO80E-203ENST00000540562 OGDHLQ9ULD0 1010 aa13.65□□□□□ -0.22
INO80E-203ENST00000540562 SH2B3Q9UQQ2 575 aa13.65□□□□□ -0.22
INO80E-203ENST00000540562 KRBA1A5PL33 1030 aa13.65□□□□□ -0.23
INO80E-203ENST00000540562 MGAT4DA6NG13 374 aa13.65□□□□□ -0.23
INO80E-203ENST00000540562 ARHGEF33A8MVX0 844 aa13.65□□□□□ -0.23
INO80E-203ENST00000540562 TTC34A8MYJ7 566 aa13.65□□□□□ -0.23
INO80E-203ENST00000540562 CLDN25C9JDP6 229 aa13.65□□□□□ -0.23
INO80E-203ENST00000540562 TBX1O43435 398 aa13.65□□□□□ -0.23
INO80E-203ENST00000540562 TPST2O60704 377 aa13.65□□□□□ -0.23
INO80E-203ENST00000540562 RPLP2P05387 115 aaKnown RBP13.65□□□□□ -0.23
INO80E-203ENST00000540562 C7P10643 843 aa13.65□□□□□ -0.23
INO80E-203ENST00000540562 PCMT1P22061 227 aa13.65□□□□□ -0.23
INO80E-203ENST00000540562 PAX3P23760 479 aa13.65□□□□□ -0.23
INO80E-203ENST00000540562 CST5P28325 142 aaPredicted RBP13.65□□□□□ -0.23
INO80E-203ENST00000540562 GTF2E2P29084 291 aaKnown RBP13.65□□□□□ -0.23
INO80E-203ENST00000540562 ARSIQ5FYB1 569 aa13.65□□□□□ -0.23
INO80E-203ENST00000540562 MACC1Q6ZN28 852 aa13.65□□□□□ -0.23
INO80E-203ENST00000540562 FAM217AQ8IXS0 508 aa13.65□□□□□ -0.23
INO80E-203ENST00000540562 GLB1L3Q8NCI6 653 aaPredicted RBP13.65□□□□□ -0.23
INO80E-203ENST00000540562 IL17FQ96PD4 163 aa13.65□□□□□ -0.23
INO80E-203ENST00000540562 FEVQ99581 238 aa13.65□□□□□ -0.23
INO80E-203ENST00000540562 ASPSCR1Q9BZE9 553 aa13.65□□□□□ -0.23
INO80E-203ENST00000540562 CTPS2Q9NRF8 586 aa13.65□□□□□ -0.23
INO80E-203ENST00000540562 PMF1-BGLAPU3KQ54 211 aa13.65□□□□□ -0.23
INO80E-203ENST00000540562 DYTNA2CJ06 578 aa13.64□□□□□ -0.23
INO80E-203ENST00000540562 GABRR3A8MPY1 467 aa13.64□□□□□ -0.23
INO80E-203ENST00000540562 ATP1B2P14415 290 aaPredicted RBP13.64□□□□□ -0.23
INO80E-203ENST00000540562 PTNP21246 168 aa13.64□□□□□ -0.23
INO80E-203ENST00000540562 XPAP23025 273 aaPredicted RBP13.64□□□□□ -0.23
INO80E-203ENST00000540562 HOXA9P31269 272 aa13.64□□□□□ -0.23
INO80E-203ENST00000540562 PFN3P60673 137 aa13.64□□□□□ -0.23
INO80E-203ENST00000540562 RPS13P62277 151 aaKnown RBP13.64□□□□□ -0.23
INO80E-203ENST00000540562 SNRPD1P62314 119 aaKnown RBP13.64□□□□□ -0.23
INO80E-203ENST00000540562 GRIN2CQ14957 1233 aa13.64□□□□□ -0.23
INO80E-203ENST00000540562 FXNQ16595 210 aa13.64□□□□□ -0.23
INO80E-203ENST00000540562 C22orf39Q6P5X5 142 aa13.64□□□□□ -0.23
INO80E-203ENST00000540562 TPRG1Q6ZUI0 275 aa13.64□□□□□ -0.23
INO80E-203ENST00000540562 THOC6Q86W42 341 aaKnown RBP13.64□□□□□ -0.23
INO80E-203ENST00000540562 MEX3DQ86XN8 651 aaKnown RBP13.64□□□□□ -0.23
INO80E-203ENST00000540562 PTOV1Q86YD1 416 aa13.64□□□□□ -0.23
INO80E-203ENST00000540562 HIPK1Q86Z02 1210 aa13.64□□□□□ -0.23
INO80E-203ENST00000540562 SVOPLQ8N434 492 aa13.64□□□□□ -0.23
INO80E-203ENST00000540562 CCDC115Q96NT0 180 aa13.64□□□□□ -0.23
INO80E-203ENST00000540562 TCF25Q9BQ70 676 aa13.64□□□□□ -0.23
INO80E-203ENST00000540562 INIPQ9NRY2 104 aa13.64□□□□□ -0.23
INO80E-203ENST00000540562 SCN3BQ9NY72 215 aa13.64□□□□□ -0.23
INO80E-203ENST00000540562 SCHIP1Q9P0W5 487 aaPredicted RBP13.64□□□□□ -0.23
INO80E-203ENST00000540562 ERGIC3Q9Y282 383 aa13.64□□□□□ -0.23
INO80E-203ENST00000540562 TRBV5-3A0A0A0MS03 114 aa13.64□□□□□ -0.23
INO80E-203ENST00000540562 SH3BP5O60239 455 aa13.64□□□□□ -0.23
INO80E-203ENST00000540562 GREM1O60565 184 aa13.64□□□□□ -0.23
INO80E-203ENST00000540562 NTHL1P78549 312 aa13.64□□□□□ -0.23
INO80E-203ENST00000540562 ABHD18Q0P651 414 aa13.64□□□□□ -0.23
INO80E-203ENST00000540562 IRAK1BP1Q5VVH5 260 aa13.64□□□□□ -0.23
INO80E-203ENST00000540562 C11orf96Q7Z7L8 435 aa13.64□□□□□ -0.23
INO80E-203ENST00000540562 ZZZ3Q8IYH5 903 aa13.64□□□□□ -0.23
INO80E-203ENST00000540562 OR4A15Q8NGL6 344 aa13.64□□□□□ -0.23
INO80E-203ENST00000540562 DUSP26Q9BV47 211 aa13.64□□□□□ -0.23
INO80E-203ENST00000540562 MRPL9Q9BYD2 267 aaKnown RBP13.64□□□□□ -0.23
INO80E-203ENST00000540562 VPS29Q9UBQ0 182 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms