RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 TBC1D3IA0A087WXS9 549 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 TBC1D3EA0A087X179 549 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 TBC1D3KA0A087X1G2 549 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 TBC1D3FA6NER0 549 aaPredicted RBP14.32□□□□□ -0.12
TSFM-207ENST00000540550 TBC1D3LB9A6J9 549 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 FPGTO14772 594 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 SCAMP2O15127 329 aaKnown RBP14.32□□□□□ -0.12
TSFM-207ENST00000540550 PCDH7O60245 1069 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 SCELO95171 688 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 TBC1D3HP0C7X1 549 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 COL9A1P20849 921 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 RPL10P27635 214 aaKnown RBP14.32□□□□□ -0.12
TSFM-207ENST00000540550 RAE1P78406 368 aaKnown RBP14.32□□□□□ -0.12
TSFM-207ENST00000540550 PRKCQQ04759 706 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 GRSF1Q12849 480 aaKnown RBP eCLIP14.32□□□□□ -0.12
TSFM-207ENST00000540550 FAM98BQ52LJ0 330 aaKnown RBP14.32□□□□□ -0.12
TSFM-207ENST00000540550 TBC1D3GQ6DHY5 549 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 TBC1D3CQ6IPX1 549 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 HORMAD1Q86X24 394 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 MICU2Q8IYU8 434 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 TBC1D3Q8IZP1 549 aaPredicted RBP14.32□□□□□ -0.12
TSFM-207ENST00000540550 MARVELD2Q8N4S9 558 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 PACRGLQ8N7B6 248 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 SNX19Q92543 992 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 NCLNQ969V3 563 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 FAM162AQ96A26 154 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 SH3KBP1Q96B97 665 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 RNF145Q96MT1 663 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 PANX1Q96RD7 426 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 PRPF18Q99633 342 aaKnown RBP14.32□□□□□ -0.12
TSFM-207ENST00000540550 TIMM29Q9BSF4 260 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 ZNF576Q9H609 170 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 GORASP2Q9H8Y8 452 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 PREBQ9HCU5 417 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 SLC6A13Q9NSD5 602 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 MOSPD1Q9UJG1 213 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 SCML1Q9UN30 329 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 NCKAP1Q9Y2A7 1128 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 AK5Q9Y6K8 562 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 PIAS3Q9Y6X2 628 aa14.32□□□□□ -0.12
TSFM-207ENST00000540550 COL4A2P08572 1712 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 A0A1W2PQF6 199 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 FAM149AA5PLN7 773 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 A6NHS1 94 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 EVPLLA8MZ36 301 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 CACNB4O00305 520 aaPredicted RBP14.31□□□□□ -0.12
TSFM-207ENST00000540550 ADAM23O75077 832 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 ZCCHC18P0CG32 403 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 DRD1P21728 446 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 MAT2AP31153 395 aaKnown RBP14.31□□□□□ -0.12
TSFM-207ENST00000540550 BMP8BP34820 402 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 IGFALSP35858 605 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 LTBRP36941 435 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 CDKN2CP42773 168 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 CHN2P52757 468 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 MEF2AQ02078 507 aaPredicted RBP14.31□□□□□ -0.12
TSFM-207ENST00000540550 DMPKQ09013 629 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 HKDC1Q2TB90 917 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 C6orf52Q5T4I8 152 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 CPTPQ5TA50 214 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 C17orf64Q86WR6 236 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 PHACTR4Q8IZ21 702 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 OR8J2Q8NGG1 315 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 FAM131CQ96AQ9 280 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 C11orf24Q96F05 449 aaPredicted RBP14.31□□□□□ -0.12
TSFM-207ENST00000540550 ZNF597Q96LX8 424 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 CENPKQ9BS16 269 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 C9orf16Q9BUW7 83 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 UGT2B28Q9BY64 529 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 PCBD2Q9H0N5 130 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 KAT8Q9H7Z6 458 aaKnown RBP14.31□□□□□ -0.12
TSFM-207ENST00000540550 PDP2Q9P2J9 529 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 CXCR6O00574 342 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 KIF1CO43896 1103 aaKnown RBP14.31□□□□□ -0.12
TSFM-207ENST00000540550 LDLRP01130 860 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 ERGP11308 486 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 CKMT2P17540 419 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 PIK3CBP42338 1070 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 CHRNB3Q05901 458 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 ATP6AP1Q15904 470 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 INTS11Q5TA45 600 aaKnown RBP14.31□□□□□ -0.12
TSFM-207ENST00000540550 PPP4R4Q6NUP7 873 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 ST13P4Q8IZP2 240 aaPredicted RBP14.31□□□□□ -0.12
TSFM-207ENST00000540550 SMRP1Q8NCR6 262 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 VPS37AQ8NEZ2 397 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 SMPDL3AQ92484 453 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 SIPA1Q96FS4 1042 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 AURKBQ96GD4 344 aaPredicted RBP14.31□□□□□ -0.12
TSFM-207ENST00000540550 CNBD2Q96M20 576 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 C12orf66Q96MD2 445 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 FERD3LQ96RJ6 166 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 DUSP26Q9BV47 211 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 ACAT2Q9BWD1 397 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 OSBPL11Q9BXB4 747 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 PELI2Q9HAT8 420 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 C8orf4Q9NR00 106 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 LIMD1Q9UGP4 676 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 TAC3Q9UHF0 121 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 ADGRE2Q9UHX3 823 aa14.31□□□□□ -0.12
TSFM-207ENST00000540550 FZD4Q9ULV1 537 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms