RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 PTPN3P26045 913 aa10.78□□□□□ -0.68
PBX1-212ENST00000540236 NUDT1P36639 197 aa10.78□□□□□ -0.68
PBX1-212ENST00000540236 TEKQ02763 1124 aa10.78□□□□□ -0.68
PBX1-212ENST00000540236 CREB5Q02930 508 aa10.78□□□□□ -0.68
PBX1-212ENST00000540236 ATAT1Q5SQI0 421 aa10.78□□□□□ -0.68
PBX1-212ENST00000540236 HMGN2P46Q86SG4 172 aa10.78□□□□□ -0.68
PBX1-212ENST00000540236 DNERQ8NFT8 737 aa10.78□□□□□ -0.68
PBX1-212ENST00000540236 TWNKQ96RR1 684 aa10.78□□□□□ -0.68
PBX1-212ENST00000540236 CAPN10Q9HC96 672 aa10.78□□□□□ -0.68
PBX1-212ENST00000540236 PCDHB5Q9Y5E4 795 aa10.78□□□□□ -0.68
PBX1-212ENST00000540236 FAM86C2PA6NEL3 165 aa10.77□□□□□ -0.68
PBX1-212ENST00000540236 CCDC85CA6NKD9 419 aa10.77□□□□□ -0.68
PBX1-212ENST00000540236 CSN2P05814 226 aa10.77□□□□□ -0.68
PBX1-212ENST00000540236 PER3P56645 1201 aa10.77□□□□□ -0.68
PBX1-212ENST00000540236 ADARB1P78563 741 aaKnown RBP10.77□□□□□ -0.68
PBX1-212ENST00000540236 PRKCDQ05655 676 aa10.77□□□□□ -0.68
PBX1-212ENST00000540236 ADAM15Q13444 863 aa10.77□□□□□ -0.68
PBX1-212ENST00000540236 COL9A2Q14055 689 aaPredicted RBP10.77□□□□□ -0.68
PBX1-212ENST00000540236 CDC73Q6P1J9 531 aa10.77□□□□□ -0.68
PBX1-212ENST00000540236 PODNQ7Z5L7 613 aa10.77□□□□□ -0.68
PBX1-212ENST00000540236 DPPA2Q7Z7J5 298 aa10.77□□□□□ -0.68
PBX1-212ENST00000540236 OR2T35Q8NGX2 323 aa10.77□□□□□ -0.68
PBX1-212ENST00000540236 RNASE11Q8TAA1 199 aaKnown RBP10.77□□□□□ -0.68
PBX1-212ENST00000540236 CLEC4DQ8WXI8 215 aa10.77□□□□□ -0.68
PBX1-212ENST00000540236 FCGR1BQ92637 280 aa10.77□□□□□ -0.68
PBX1-212ENST00000540236 KAT2AQ92830 837 aa10.77□□□□□ -0.68
PBX1-212ENST00000540236 HSH2DQ96JZ2 352 aa10.77□□□□□ -0.68
PBX1-212ENST00000540236 KCTD7Q96MP8 289 aa10.77□□□□□ -0.68
PBX1-212ENST00000540236 PCDHGB1Q9Y5G3 927 aa10.77□□□□□ -0.68
PBX1-212ENST00000540236 A0A1B0GV50 99 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 C2orf81A6NN90 581 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 HACD1B0YJ81 288 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 ZNF195O14628 629 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 RGS13O14921 159 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 B4GALT5O43286 388 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 UGT2B17O75795 530 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 USP17L7P0C7H9 530 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 SLC35E2BP0CK96 405 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 PIM1P11309 404 aaPredicted RBP10.77□□□□□ -0.69
PBX1-212ENST00000540236 HOXD10P28358 340 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 TRIM23P36406 574 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 OR2T5Q6IEZ7 315 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 PMF1Q6P1K2 205 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 WDTC1Q8N5D0 677 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 OR2T29Q8NH02 315 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 KLHL5Q96PQ7 755 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 RIT2Q99578 217 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 TMEM185BQ9H7F4 350 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 GXYLT2A0PJZ3 443 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 PSMD3O43242 534 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 PRG2P13727 222 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 AXLP30530 894 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 EEFSECP57772 596 aaKnown RBP10.77□□□□□ -0.69
PBX1-212ENST00000540236 FAM187BQ17R55 369 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 IQCCQ4KMZ1 466 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 STXBP5Q5T5C0 1151 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 ETFRF1Q6IPR1 90 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 LAPTM4BQ86VI4 370 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 OR10G2Q8NGC3 310 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 NELL2Q99435 816 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 MGLLQ99685 303 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 ZNF670Q9BS34 389 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 AMBRA1Q9C0C7 1298 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 DPEP3Q9H4B8 488 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 GABARAPO95166 117 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 GABRB3P28472 473 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 PRMT2P55345 433 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 PDZD11Q5EBL8 140 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 MEX3DQ86XN8 651 aaKnown RBP10.77□□□□□ -0.69
PBX1-212ENST00000540236 LSMEM2Q8N112 164 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 ARFGAP1Q8N6T3 406 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 GOT1L1Q8NHS2 421 aaPredicted RBP10.77□□□□□ -0.69
PBX1-212ENST00000540236 TRMT61AQ96FX7 289 aaKnown RBP10.77□□□□□ -0.69
PBX1-212ENST00000540236 POT1Q9NUX5 634 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 RPS6KA6Q9UK32 745 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 SAMD4AQ9UPU9 718 aaKnown RBP10.77□□□□□ -0.69
PBX1-212ENST00000540236 MAP4K5Q9Y4K4 846 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 ARFGEF2Q9Y6D5 1785 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 CACNA1FO60840 1977 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 UBE2QL1A1L167 161 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 PTHP01270 115 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 DNAJA1P31689 397 aaKnown RBP10.77□□□□□ -0.69
PBX1-212ENST00000540236 CSTF2P33240 577 aaKnown RBP eCLIP10.77□□□□□ -0.69
PBX1-212ENST00000540236 GRAPQ13588 217 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 ZZZ3Q8IYH5 903 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 OR4A15Q8NGL6 344 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 GRAPLQ8TC17 118 aaPredicted RBP10.77□□□□□ -0.69
PBX1-212ENST00000540236 COL21A1Q96P44 957 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 FUZQ9BT04 418 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 TKTL2Q9H0I9 626 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 MOCS1Q9NZB8 636 aa10.77□□□□□ -0.69
PBX1-212ENST00000540236 TEX13CA0A0J9YWL9 993 aa10.76□□□□□ -0.69
PBX1-212ENST00000540236 SCO2O43819 266 aa10.76□□□□□ -0.69
PBX1-212ENST00000540236 VTNP04004 478 aa10.76□□□□□ -0.69
PBX1-212ENST00000540236 CDK1P06493 297 aa10.76□□□□□ -0.69
PBX1-212ENST00000540236 CREB3L2Q70SY1 520 aa10.76□□□□□ -0.69
PBX1-212ENST00000540236 TMC8Q8IU68 726 aa10.76□□□□□ -0.69
PBX1-212ENST00000540236 MED8Q96G25 268 aa10.76□□□□□ -0.69
PBX1-212ENST00000540236 CINPQ9BW66 212 aaPredicted RBP10.76□□□□□ -0.69
PBX1-212ENST00000540236 IQCF5A8MTL0 148 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms