RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 OR6C74A6NCV1 312 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 CFAP73A6NFT4 308 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 TLCD2A6NGC4 264 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 ERICH4A6NGS2 130 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 E9PBE3 544 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 TMX2-CTNND1H3BSU7 103 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 KLHL41O60662 606 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 SRPX2O60687 465 aaPredicted RBP11.34□□□□□ -0.59
VTN-202ENST00000539746 STAMBPO95630 424 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 IL6P05231 212 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 LINC00032P0C843 101 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 CDH1P12830 882 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 PRPS1L1P21108 318 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 HPCAL1P37235 193 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 TRA2BP62995 288 aaKnown RBP11.34□□□□□ -0.59
VTN-202ENST00000539746 MXRA7P84157 204 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 CYLC2Q14093 348 aaPredicted RBP11.34□□□□□ -0.59
VTN-202ENST00000539746 NR1D2Q14995 579 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 MMEL1Q495T6 779 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 SPATS1Q496A3 300 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 PDCD4Q53EL6 469 aaKnown RBP11.34□□□□□ -0.59
VTN-202ENST00000539746 ZNF542PQ5EBM4 170 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 TCTE1Q5JU00 501 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 TPRG1LQ5T0D9 272 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 CGB2Q6NT52 195 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 PRMT9Q6P2P2 845 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 TRIM40Q6P9F5 258 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 WDR74Q6RFH5 385 aaPredicted RBP11.34□□□□□ -0.59
VTN-202ENST00000539746 SUSD1Q6UWL2 747 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 C16orf89Q6UX73 402 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 ABHD13Q7L211 337 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 ZNF438Q7Z4V0 828 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 OR2A1Q8NGT9 310 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 ADAMTS18Q8TE60 1221 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 ESAMQ96AP7 390 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 RGMAQ96B86 450 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 MTERF3Q96E29 417 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 NSL1Q96IY1 281 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 KCNC2Q96PR1 638 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 MENTQ9BUN1 341 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 FAIM2Q9BWQ8 316 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 AKTIPQ9H8T0 292 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 COPS7BQ9H9Q2 264 aaPredicted RBP11.34□□□□□ -0.59
VTN-202ENST00000539746 EFCAB1Q9HAE3 211 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 PRDM9Q9NQV7 894 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 LRIT1Q9P2V4 623 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 KLF15Q9UIH9 416 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 PADI4Q9UM07 663 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 SLC12A4Q9UP95 1085 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 AP1M2Q9Y6Q5 423 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 ATG2BQ96BY7 2078 aa11.34□□□□□ -0.59
VTN-202ENST00000539746 C15orf38-AP3S2A0A0A6YYH1 394 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 ZNF195O14628 629 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 FFAR3O14843 346 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 LSM1O15116 133 aaKnown RBP11.33□□□□□ -0.6
VTN-202ENST00000539746 ANGPT2O15123 496 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 CFLARO15519 480 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 GPR42O15529 346 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 OR1F1O43749 312 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 PEX11AO75192 247 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 SLC22A3O75751 556 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 GP1BAP07359 652 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 TSPAN8P19075 237 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 CDH3P22223 829 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 EMP3P54852 163 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 HNRNPH2P55795 449 aaKnown RBP11.33□□□□□ -0.6
VTN-202ENST00000539746 SRSF11Q05519 484 aaKnown RBP11.33□□□□□ -0.6
VTN-202ENST00000539746 SQSTM1Q13501 440 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 C1orf61Q13536 156 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 HEPACAMQ14CZ8 416 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 ABRAXAS2Q15018 415 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 DEFB133Q30KQ1 61 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 CCSMST1Q4G0I0 132 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 LACTB2Q53H82 288 aaPredicted RBP11.33□□□□□ -0.6
VTN-202ENST00000539746 C6orf136Q5SQH8 315 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 C6orf163Q5TEZ5 329 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 YOD1Q5VVQ6 348 aaPredicted RBP11.33□□□□□ -0.6
VTN-202ENST00000539746 DUS1LQ6P1R4 473 aaKnown RBP11.33□□□□□ -0.6
VTN-202ENST00000539746 GALNT18Q6P9A2 607 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 XKR5Q6UX68 686 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 ARPINQ7Z6K5 226 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 BPHLQ86WA6 291 aaPredicted RBP11.33□□□□□ -0.6
VTN-202ENST00000539746 NUDT13Q86X67 352 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 FAM129CQ86XR2 697 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 ADGRF3Q8IZF5 1079 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 MFSD9Q8NBP5 474 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 PPFIBP2Q8ND30 876 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 CCL4L1Q8NHW4 92 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 HUS1BQ8NHY5 278 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 WDR20Q8TBZ3 569 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 ROPN1LQ96C74 230 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 OR4K3Q96R72 315 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 SH3GL1Q99961 368 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 ZFYVE21Q9BQ24 234 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 DPH7Q9BTV6 452 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 TBCDQ9BTW9 1192 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 BRINP2Q9C0B6 783 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 C1orf21Q9H246 121 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 WDR41Q9HAD4 459 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 PDE7BQ9NP56 450 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms