RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 ADAP2Q9NPF8 381 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 FBXO9Q9UK97 447 aaPredicted RBP6.31□□□□□ -1.4
LSAMP-207ENST00000539563 AJAP1Q9UKB5 411 aaPredicted RBP6.31□□□□□ -1.4
LSAMP-207ENST00000539563 NWD2Q9ULI1 1742 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 PRAMEF33A0A0G2JMD5 474 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 OR51F1A6NGY5 319 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 B4DGG1 531 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 LOC730098B7Z3J9 87 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 PRAMEF10O60809 474 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF8P17098 575 aaPredicted RBP6.31□□□□□ -1.4
LSAMP-207ENST00000539563 ITIH1P19827 911 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 CCND3P30281 292 aaPredicted RBP6.31□□□□□ -1.4
LSAMP-207ENST00000539563 RYKP34925 604 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 ADAM15Q13444 863 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 BLMHQ13867 455 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 EPGNQ6UW88 154 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 PEX13Q92968 403 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 B3GALT6Q96L58 329 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 KCNC2Q96PR1 638 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 CGREF1Q99674 301 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 SEC14L4Q9UDX3 406 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 PCDHGB6Q9Y5F9 930 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 LTBP3Q9NS15 1303 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 CCNHP51946 323 aaPredicted RBP6.31□□□□□ -1.4
LSAMP-207ENST00000539563 GJA9P57773 515 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 TXNL4AP83876 142 aaKnown RBP6.31□□□□□ -1.4
LSAMP-207ENST00000539563 C2orf27AQ580R0 203 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 PDSS1Q5T2R2 415 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 FIP1L1Q6UN15 594 aaKnown RBP6.31□□□□□ -1.4
LSAMP-207ENST00000539563 DCUN1D3Q8IWE4 304 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 OR4F6Q8NGB9 312 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 AURKBQ96GD4 344 aaPredicted RBP6.31□□□□□ -1.4
LSAMP-207ENST00000539563 EBF3Q9H4W6 596 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 CCSER2Q9H7U1 834 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 TAS2R1Q9NYW7 299 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 NUMA1Q14980 2115 aa6.31□□□□□ -1.4
LSAMP-207ENST00000539563 CXorf49A8MYA2 514 aaPredicted RBP6.3□□□□□ -1.4
LSAMP-207ENST00000539563 PEX12O00623 359 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 NOS1APO75052 506 aaPredicted RBP6.3□□□□□ -1.4
LSAMP-207ENST00000539563 FGF18O76093 207 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 F2P00734 622 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 ACVRL1P37023 503 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 GSTM4Q03013 218 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 ULK3Q6PHR2 472 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 TMIGD1Q6UXZ0 262 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 NLGN2Q8NFZ4 835 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 NXPE2Q96DL1 559 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 ASPNQ9BXN1 380 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 SLC22A4Q9H015 551 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 VRTNQ9H8Y1 702 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 Q9N2J8 555 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 GKN1Q9NS71 199 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 DZANK1Q9NVP4 752 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 MS4A12Q9NXJ0 267 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 TOPAZ1Q8N9V7 1692 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 FOXO6A8MYZ6 492 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 PRAMEF11O60813 436 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 CLDN7O95471 211 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 PLGP00747 810 aaPredicted RBP6.3□□□□□ -1.4
LSAMP-207ENST00000539563 BCHEP06276 602 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 PLGLB1Q02325 96 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 CBLBQ13191 982 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 NPTX1Q15818 432 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 DECR1Q16698 335 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 GPR153Q6NV75 609 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 LGI4Q8N135 537 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 FAM156AQ8NDB6 213 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 PROKR2Q8NFJ6 384 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 MAPK15Q8TD08 544 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 MAPKAP1Q9BPZ7 522 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 FEM1AQ9BSK4 669 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 HSD3B7Q9H2F3 369 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 OARD1Q9Y530 152 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 TEX13CA0A0J9YWL9 993 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 TLR4O00206 839 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 ERI3O43414 337 aaKnown RBP6.3□□□□□ -1.4
LSAMP-207ENST00000539563 KAT7O95251 611 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 HOXB2P14652 356 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 PGAM2P15259 253 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 TLE2Q04725 743 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 CSTF1Q05048 431 aaKnown RBP6.3□□□□□ -1.4
LSAMP-207ENST00000539563 ABHD18Q0P651 414 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 GPR17Q13304 367 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 AMZ1Q400G9 498 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 LRRC66Q68CR7 880 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 CHCHD4Q8N4Q1 142 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 C1orf52Q8N6N3 182 aaKnown RBP6.3□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF676Q8N7Q3 588 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 NPLOC4Q8TAT6 608 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 SMPDL3BQ92485 455 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 TFGQ92734 400 aaPredicted RBP6.3□□□□□ -1.4
LSAMP-207ENST00000539563 OTUB2Q96DC9 234 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 LRIG1Q96JA1 1093 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 UCK2Q9BZX2 261 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 PCDHAC1Q9H158 963 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 ACTL8Q9H568 366 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 CRTAC1Q9NQ79 661 aa6.3□□□□□ -1.4
LSAMP-207ENST00000539563 TRNAU1APQ9NX07 287 aaKnown RBP6.3□□□□□ -1.4
LSAMP-207ENST00000539563 TMA7Q9Y2S6 64 aaKnown RBP6.3□□□□□ -1.4
LSAMP-207ENST00000539563 SLC16A5O15375 505 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms