RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 ZUFSPQ96AP4 578 aa12.45□□□□□ -0.42
CCDC42-202ENST00000539522 TCTN2Q96GX1 697 aa12.45□□□□□ -0.42
CCDC42-202ENST00000539522 SLC46A1Q96NT5 459 aa12.45□□□□□ -0.42
CCDC42-202ENST00000539522 ZNF317Q96PQ6 595 aaPredicted RBP12.45□□□□□ -0.42
CCDC42-202ENST00000539522 OR2A5Q96R48 311 aa12.45□□□□□ -0.42
CCDC42-202ENST00000539522 OR6C1Q96RD1 312 aa12.45□□□□□ -0.42
CCDC42-202ENST00000539522 CMKLR1Q99788 373 aa12.45□□□□□ -0.42
CCDC42-202ENST00000539522 NRSN2Q9GZP1 204 aa12.45□□□□□ -0.42
CCDC42-202ENST00000539522 AICDAQ9GZX7 198 aa12.45□□□□□ -0.42
CCDC42-202ENST00000539522 SPRTNQ9H040 489 aaPredicted RBP12.45□□□□□ -0.42
CCDC42-202ENST00000539522 POLR1BQ9H9Y6 1135 aa12.45□□□□□ -0.42
CCDC42-202ENST00000539522 FBXO8Q9NRD0 319 aa12.45□□□□□ -0.42
CCDC42-202ENST00000539522 COPG2Q9UBF2 871 aa12.45□□□□□ -0.42
CCDC42-202ENST00000539522 PISDQ9UG56 409 aa12.45□□□□□ -0.42
CCDC42-202ENST00000539522 B3GALT1Q9Y5Z6 326 aa12.45□□□□□ -0.42
CCDC42-202ENST00000539522 FEZF1A0PJY2 475 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 SYCE1LA8MT33 242 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 TMX2-CTNND1H3BSU7 103 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 K7EPI3 171 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 P2RX6O15547 441 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 BRINP1O60477 761 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 CCNT2O60583 730 aaKnown RBP12.44□□□□□ -0.42
CCDC42-202ENST00000539522 TRIM13O60858 407 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 WFS1O76024 890 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 DXOO77932 396 aaKnown RBP12.44□□□□□ -0.42
CCDC42-202ENST00000539522 FKBP9O95302 570 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 MYL2P10916 166 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 GFAPP14136 432 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 CCND1P24385 295 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 EEF1DP29692 281 aaKnown RBP12.44□□□□□ -0.42
CCDC42-202ENST00000539522 CMPK1P30085 196 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 ALDH3A1P30838 453 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 CSTF2P33240 577 aaKnown RBP eCLIP12.44□□□□□ -0.42
CCDC42-202ENST00000539522 BCL6P41182 706 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 SEC24CP53992 1094 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 ABATP80404 500 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 ASPHQ12797 758 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 CDC16Q13042 620 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 ZNF678Q5SXM1 525 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 THEMIS2Q5TEJ8 643 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 PWWP2BQ6NUJ5 590 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 NXPE4Q6UWF7 544 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 ERMP1Q7Z2K6 904 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 LRRC70Q7Z2Q7 622 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 GOLGA7Q7Z5G4 137 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 VN1R5Q7Z5H4 357 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 CPLX4Q7Z7G2 160 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 ANKRD53Q8N9V6 530 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 OR52B6Q8NGF0 335 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 OR6Y1Q8NGX8 325 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 SLC5A11Q8WWX8 675 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 USP7Q93009 1102 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 CCDC126Q96EE4 140 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 WDR34Q96EX3 536 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 CCT8L2Q96SF2 557 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 MECRQ9BV79 373 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 SARGQ9BW04 601 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 STRADBQ9C0K7 418 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 GSTO2Q9H4Y5 243 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 PDE7BQ9NP56 450 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 TNFRSF12AQ9NP84 129 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 FGF21Q9NSA1 209 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 TMEM184CQ9NVA4 438 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 DNAJC11Q9NVH1 559 aa12.44□□□□□ -0.42
CCDC42-202ENST00000539522 GEMIN8Q9NWZ8 242 aaKnown RBP12.44□□□□□ -0.42
CCDC42-202ENST00000539522 ZNF490Q9ULM2 529 aaPredicted RBP12.44□□□□□ -0.42
CCDC42-202ENST00000539522 ZZEF1O43149 2961 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 KCNE1BA0A087WTH5 132 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 A0A0J9YVX5 310 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 TEX51A0A1B0GUA7 166 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 UBFD1O14562 309 aaKnown RBP12.43□□□□□ -0.42
CCDC42-202ENST00000539522 H2AFYO75367 372 aaKnown RBP12.43□□□□□ -0.42
CCDC42-202ENST00000539522 IPO13O94829 963 aaKnown RBP12.43□□□□□ -0.42
CCDC42-202ENST00000539522 TNFSF15O95150 251 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 STATHP02808 62 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 TSPAN8P19075 237 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 ITGAXP20702 1163 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 ATP5F1P24539 256 aaPredicted RBP12.43□□□□□ -0.42
CCDC42-202ENST00000539522 GRK2P25098 689 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 MLLT3P42568 568 aaPredicted RBP12.43□□□□□ -0.42
CCDC42-202ENST00000539522 MAPK10P53779 464 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 CDH13P55290 713 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 REEP5Q00765 189 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 HYAL2Q12891 473 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 TRAF3Q13114 568 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 STX3Q13277 289 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 EIF3IQ13347 325 aaKnown RBP12.43□□□□□ -0.42
CCDC42-202ENST00000539522 TUBB3Q13509 450 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 DOC2AQ14183 400 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 FOXR1Q6PIV2 292 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 TIPARPQ7Z3E1 657 aaKnown RBP12.43□□□□□ -0.42
CCDC42-202ENST00000539522 TMPRSS11BQ86T26 416 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 C17orf64Q86WR6 236 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 MCATQ8IVS2 390 aaKnown RBP12.43□□□□□ -0.42
CCDC42-202ENST00000539522 C10orf107Q8IVU9 208 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 LRRC34Q8IZ02 419 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 TEX9Q8N6V9 391 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 PPP1R14CQ8TAE6 165 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 TM4SF19Q96DZ7 209 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 L3HYPDHQ96EM0 354 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms