RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 SYT16Q17RD7 645 aa18.12■□□□□ 0.49
TNFRSF1A-212ENST00000539372 HECTD2Q5U5R9 776 aa18.12■□□□□ 0.49
TNFRSF1A-212ENST00000539372 IRAK1BP1Q5VVH5 260 aa18.12■□□□□ 0.49
TNFRSF1A-212ENST00000539372 GARNL3Q5VVW2 1013 aa18.12■□□□□ 0.49
TNFRSF1A-212ENST00000539372 FAAH2Q6GMR7 532 aa18.12■□□□□ 0.49
TNFRSF1A-212ENST00000539372 AGTRAPQ6RW13 159 aa18.12■□□□□ 0.49
TNFRSF1A-212ENST00000539372 CISD2Q8N5K1 135 aaKnown RBP18.12■□□□□ 0.49
TNFRSF1A-212ENST00000539372 MVB12AQ96EY5 273 aa18.12■□□□□ 0.49
TNFRSF1A-212ENST00000539372 THOC3Q96J01 351 aaKnown RBP18.12■□□□□ 0.49
TNFRSF1A-212ENST00000539372 MACROD1Q9BQ69 325 aa18.12■□□□□ 0.49
TNFRSF1A-212ENST00000539372 DRC3Q9H069 523 aa18.12■□□□□ 0.49
TNFRSF1A-212ENST00000539372 ZNF160Q9HCG1 818 aa18.12■□□□□ 0.49
TNFRSF1A-212ENST00000539372 TMEM184CQ9NVA4 438 aa18.12■□□□□ 0.49
TNFRSF1A-212ENST00000539372 CSAG2Q9Y5P2 127 aa18.12■□□□□ 0.49
TNFRSF1A-212ENST00000539372 TEX264Q9Y6I9 313 aa18.12■□□□□ 0.49
TNFRSF1A-212ENST00000539372 SLC16A5O15375 505 aa18.11■□□□□ 0.49
TNFRSF1A-212ENST00000539372 PRPF4O43172 522 aaKnown RBP eCLIP18.11■□□□□ 0.495e-7■■■■□ 24.8
TNFRSF1A-212ENST00000539372 SEC31AO94979 1220 aaKnown RBP18.11■□□□□ 0.49
TNFRSF1A-212ENST00000539372 TSPAN12O95859 305 aa18.11■□□□□ 0.49
TNFRSF1A-212ENST00000539372 EMP2P54851 167 aa18.11■□□□□ 0.49
TNFRSF1A-212ENST00000539372 IL2P60568 153 aa18.11■□□□□ 0.49
TNFRSF1A-212ENST00000539372 MRPS25P82663 173 aaKnown RBP18.11■□□□□ 0.49
TNFRSF1A-212ENST00000539372 MAT1AQ00266 395 aaKnown RBP18.11■□□□□ 0.49
TNFRSF1A-212ENST00000539372 MRPL49Q13405 166 aaKnown RBP18.11■□□□□ 0.49
TNFRSF1A-212ENST00000539372 AGAP7PQ5VUJ5 663 aa18.11■□□□□ 0.49
TNFRSF1A-212ENST00000539372 STEAP4Q687X5 459 aa18.11■□□□□ 0.49
TNFRSF1A-212ENST00000539372 VN1R4Q7Z5H5 301 aa18.11■□□□□ 0.49
TNFRSF1A-212ENST00000539372 GALNT7Q86SF2 657 aa18.11■□□□□ 0.49
TNFRSF1A-212ENST00000539372 IQCKQ8N0W5 287 aa18.11■□□□□ 0.49
TNFRSF1A-212ENST00000539372 SNRNP40Q96DI7 357 aaKnown RBP18.11■□□□□ 0.49
TNFRSF1A-212ENST00000539372 SNF8Q96H20 258 aa18.11■□□□□ 0.49
TNFRSF1A-212ENST00000539372 VPS50Q96JG6 964 aa18.11■□□□□ 0.49
TNFRSF1A-212ENST00000539372 PDLIM2Q96JY6 352 aa18.11■□□□□ 0.49
TNFRSF1A-212ENST00000539372 AGAP4Q96P64 663 aa18.11■□□□□ 0.49
TNFRSF1A-212ENST00000539372 OLFM1Q99784 485 aa18.11■□□□□ 0.49
TNFRSF1A-212ENST00000539372 LHPPQ9H008 270 aa18.11■□□□□ 0.49
TNFRSF1A-212ENST00000539372 PCBD2Q9H0N5 130 aa18.11■□□□□ 0.49
TNFRSF1A-212ENST00000539372 VWA7Q9Y334 891 aa18.11■□□□□ 0.49
TNFRSF1A-212ENST00000539372 MDC1Q14676 2089 aaKnown RBP18.11■□□□□ 0.49
TNFRSF1A-212ENST00000539372 SHANK1Q9Y566 2161 aa18.11■□□□□ 0.49
TNFRSF1A-212ENST00000539372 PTPN13Q12923 2485 aa18.11■□□□□ 0.49
TNFRSF1A-212ENST00000539372 FEZF1A0PJY2 475 aa18.1■□□□□ 0.49
TNFRSF1A-212ENST00000539372 IDSB3KWA1 339 aa18.1■□□□□ 0.49
TNFRSF1A-212ENST00000539372 FANCGO15287 622 aa18.1■□□□□ 0.49
TNFRSF1A-212ENST00000539372 HPP00738 406 aa18.1■□□□□ 0.49
TNFRSF1A-212ENST00000539372 HEXBP07686 556 aa18.1■□□□□ 0.49
TNFRSF1A-212ENST00000539372 HIST1H2AGP0C0S8 130 aaPredicted RBP18.1■□□□□ 0.49
TNFRSF1A-212ENST00000539372 HIST1H2ADP20671 130 aa18.1■□□□□ 0.49
TNFRSF1A-212ENST00000539372 FDXRP22570 491 aa18.1■□□□□ 0.49
TNFRSF1A-212ENST00000539372 HRH2P25021 359 aa18.1■□□□□ 0.49
TNFRSF1A-212ENST00000539372 PAFAH1B1P43034 410 aa18.1■□□□□ 0.49
TNFRSF1A-212ENST00000539372 GLRBP48167 497 aa18.1■□□□□ 0.49
TNFRSF1A-212ENST00000539372 RPS15AP62244 130 aaKnown RBP18.1■□□□□ 0.49
TNFRSF1A-212ENST00000539372 CSNK1G2P78368 415 aa18.1■□□□□ 0.49
TNFRSF1A-212ENST00000539372 EEF1A2Q05639 463 aaKnown RBP18.1■□□□□ 0.49
TNFRSF1A-212ENST00000539372 NDUFA9Q16795 377 aa18.1■□□□□ 0.49
TNFRSF1A-212ENST00000539372 ATG9BQ674R7 924 aa18.1■□□□□ 0.49
TNFRSF1A-212ENST00000539372 CUZD1Q86UP6 607 aa18.1■□□□□ 0.49
TNFRSF1A-212ENST00000539372 OR9A4Q8NGU2 314 aa18.1■□□□□ 0.49
TNFRSF1A-212ENST00000539372 LRRC39Q96DD0 335 aa18.1■□□□□ 0.49
TNFRSF1A-212ENST00000539372 HIST1H2AHQ96KK5 128 aa18.1■□□□□ 0.49
TNFRSF1A-212ENST00000539372 KRT12Q99456 494 aa18.1■□□□□ 0.49
TNFRSF1A-212ENST00000539372 HIST1H2AJQ99878 128 aa18.1■□□□□ 0.49
TNFRSF1A-212ENST00000539372 H2AFJQ9BTM1 129 aa18.1■□□□□ 0.49
TNFRSF1A-212ENST00000539372 MKKSQ9NPJ1 570 aaPredicted RBP18.1■□□□□ 0.49
TNFRSF1A-212ENST00000539372 C14orf105Q9NVL8 296 aa18.1■□□□□ 0.49
TNFRSF1A-212ENST00000539372 ASF1BQ9NVP2 202 aa18.1■□□□□ 0.49
TNFRSF1A-212ENST00000539372 ARL15Q9NXU5 204 aa18.1■□□□□ 0.49
TNFRSF1A-212ENST00000539372 EFCAB8A8MWE9 144 aa18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 CCDC188H7C350 402 aa18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 TP73O15350 636 aa18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 COX6A1P12074 109 aa18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 CDH1P12830 882 aa18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 SAT1P21673 171 aa18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 VARSP26640 1264 aaKnown RBP18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 BCL6P41182 706 aa18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 RPL21P46778 160 aaKnown RBP18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 PDIA2Q13087 525 aaKnown RBP18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 FAM53BQ14153 422 aa18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 FASTKD3Q14CZ7 662 aaKnown RBP18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 ZXDCQ2QGD7 858 aaPredicted RBP18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 FHL5Q5TD97 284 aa18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 FAM45BPQ6NSW5 357 aa18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 Q6ZS92 163 aa18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 PRSS41Q7RTY9 318 aa18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 C17orf64Q86WR6 236 aa18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 ZC3H7AQ8IWR0 971 aaKnown RBP18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 SHISA5Q8N114 240 aa18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 FAM45AQ8TCE6 357 aa18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 PYCR2Q96C36 320 aa18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 CNDP1Q96KN2 507 aa18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 WDR77Q9BQA1 342 aaPredicted RBP18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 SGPP1Q9BX95 441 aa18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 SLC29A3Q9BZD2 475 aa18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 IKZF3Q9UKT9 509 aa18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 SNX24Q9Y343 169 aa18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 PSAT1Q9Y617 370 aa18.09■□□□□ 0.49
TNFRSF1A-212ENST00000539372 KCNE1BA0A087WTH5 132 aa18.08■□□□□ 0.48
TNFRSF1A-212ENST00000539372 NSG1A0A0A6YYJ2 146 aa18.08■□□□□ 0.48
TNFRSF1A-212ENST00000539372 BLACEA4D250 179 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms