RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 PDIK1LQ8N165 341 aa21.1■□□□□ 0.97
SCARB1-206ENST00000539320 LINGO1Q96FE5 620 aa21.1■□□□□ 0.97
SCARB1-206ENST00000539320 CFAP36Q96G28 342 aa21.1■□□□□ 0.97
SCARB1-206ENST00000539320 THOC3Q96J01 351 aaKnown RBP21.1■□□□□ 0.97
SCARB1-206ENST00000539320 RUNDC3BQ96NL0 473 aa21.1■□□□□ 0.97
SCARB1-206ENST00000539320 PRAP1Q96NZ9 151 aa21.1■□□□□ 0.97
SCARB1-206ENST00000539320 PSMG3-AS1Q96PY0 264 aa21.1■□□□□ 0.97
SCARB1-206ENST00000539320 EPS8L2Q9H6S3 715 aa21.1■□□□□ 0.97
SCARB1-206ENST00000539320 ZNF160Q9HCG1 818 aa21.1■□□□□ 0.97
SCARB1-206ENST00000539320 MKKSQ9NPJ1 570 aaPredicted RBP21.1■□□□□ 0.97
SCARB1-206ENST00000539320 TMEM184CQ9NVA4 438 aa21.1■□□□□ 0.97
SCARB1-206ENST00000539320 ASF1BQ9NVP2 202 aa21.1■□□□□ 0.97
SCARB1-206ENST00000539320 CHMP2BQ9UQN3 213 aa21.1■□□□□ 0.97
SCARB1-206ENST00000539320 CSAG2Q9Y5P2 127 aa21.1■□□□□ 0.97
SCARB1-206ENST00000539320 A0A0A6YYC8 382 aaPredicted RBP21.09■□□□□ 0.97
SCARB1-206ENST00000539320 USP27XA6NNY8 438 aa21.09■□□□□ 0.97
SCARB1-206ENST00000539320 IDSB3KWA1 339 aa21.09■□□□□ 0.97
SCARB1-206ENST00000539320 I3L1I5 382 aaPredicted RBP21.09■□□□□ 0.97
SCARB1-206ENST00000539320 SLC16A5O15375 505 aa21.09■□□□□ 0.97
SCARB1-206ENST00000539320 FOXS1O43638 330 aa21.09■□□□□ 0.97
SCARB1-206ENST00000539320 COX6A1P12074 109 aa21.09■□□□□ 0.97
SCARB1-206ENST00000539320 EMP2P54851 167 aa21.09■□□□□ 0.97
SCARB1-206ENST00000539320 RPS15AP62244 130 aaKnown RBP21.09■□□□□ 0.97
SCARB1-206ENST00000539320 Q0VFX4 171 aa21.09■□□□□ 0.97
SCARB1-206ENST00000539320 FAM53BQ14153 422 aa21.09■□□□□ 0.97
SCARB1-206ENST00000539320 VN1R4Q7Z5H5 301 aa21.09■□□□□ 0.97
SCARB1-206ENST00000539320 KLHL7Q8IXQ5 586 aa21.09■□□□□ 0.97
SCARB1-206ENST00000539320 PARVBQ9HBI1 364 aa21.09■□□□□ 0.97
SCARB1-206ENST00000539320 PLAC1Q9HBJ0 212 aa21.09■□□□□ 0.97
SCARB1-206ENST00000539320 NOVA2Q9UNW9 492 aaKnown RBP21.09■□□□□ 0.97
SCARB1-206ENST00000539320 POLEQ07864 2286 aa21.08■□□□□ 0.97
SCARB1-206ENST00000539320 NSG1A0A0A6YYJ2 146 aa21.08■□□□□ 0.97
SCARB1-206ENST00000539320 A0A1W2PQ72 361 aa21.08■□□□□ 0.97
SCARB1-206ENST00000539320 AHSGP02765 367 aa21.08■□□□□ 0.97
SCARB1-206ENST00000539320 STATHP02808 62 aa21.08■□□□□ 0.97
SCARB1-206ENST00000539320 CXCR2P25025 360 aa21.08■□□□□ 0.97
SCARB1-206ENST00000539320 EEF1A2Q05639 463 aaKnown RBP21.08■□□□□ 0.97
SCARB1-206ENST00000539320 NR6A1Q15406 480 aa21.08■□□□□ 0.97
SCARB1-206ENST00000539320 ATG9BQ674R7 924 aa21.08■□□□□ 0.97
SCARB1-206ENST00000539320 AGTRAPQ6RW13 159 aa21.08■□□□□ 0.97
SCARB1-206ENST00000539320 LAPTM4BQ86VI4 370 aa21.08■□□□□ 0.97
SCARB1-206ENST00000539320 ZC3H7AQ8IWR0 971 aaKnown RBP21.08■□□□□ 0.97
SCARB1-206ENST00000539320 GPATCH11Q8N954 259 aa21.08■□□□□ 0.97
SCARB1-206ENST00000539320 WDR83Q9BRX9 315 aaKnown RBP21.08■□□□□ 0.97
SCARB1-206ENST00000539320 TGIF2Q9GZN2 237 aa21.08■□□□□ 0.97
SCARB1-206ENST00000539320 LRRC4CQ9HCJ2 640 aa21.08■□□□□ 0.97
SCARB1-206ENST00000539320 PPANQ9NQ55 473 aaKnown RBP21.08■□□□□ 0.97
SCARB1-206ENST00000539320 CORO1CQ9ULV4 474 aaPredicted RBP21.08■□□□□ 0.97
SCARB1-206ENST00000539320 SH2B3Q9UQQ2 575 aa21.08■□□□□ 0.97
SCARB1-206ENST00000539320 PCDH17O14917 1159 aa21.07■□□□□ 0.96
SCARB1-206ENST00000539320 HEXBP07686 556 aa21.07■□□□□ 0.96
SCARB1-206ENST00000539320 CCND1P24385 295 aa21.07■□□□□ 0.96
SCARB1-206ENST00000539320 ELK3P41970 407 aa21.07■□□□□ 0.96
SCARB1-206ENST00000539320 AVPR1BP47901 424 aa21.07■□□□□ 0.96
SCARB1-206ENST00000539320 GLRBP48167 497 aa21.07■□□□□ 0.96
SCARB1-206ENST00000539320 GNG11P61952 73 aa21.07■□□□□ 0.96
SCARB1-206ENST00000539320 CSNK1G2P78368 415 aa21.07■□□□□ 0.96
SCARB1-206ENST00000539320 MAT1AQ00266 395 aaKnown RBP21.07■□□□□ 0.96
SCARB1-206ENST00000539320 DR1Q01658 176 aa21.07■□□□□ 0.96
SCARB1-206ENST00000539320 PDAP1Q13442 181 aaKnown RBP21.07■□□□□ 0.96
SCARB1-206ENST00000539320 NAE1Q13564 534 aa21.07■□□□□ 0.96
SCARB1-206ENST00000539320 PHKG1Q16816 387 aa21.07■□□□□ 0.96
SCARB1-206ENST00000539320 SYT16Q17RD7 645 aa21.07■□□□□ 0.96
SCARB1-206ENST00000539320 CRB2Q5IJ48 1285 aa21.07■□□□□ 0.96
SCARB1-206ENST00000539320 TEDDM1Q5T9Z0 273 aa21.07■□□□□ 0.96
SCARB1-206ENST00000539320 STEAP4Q687X5 459 aa21.07■□□□□ 0.96
SCARB1-206ENST00000539320 ISLR2Q6UXK2 745 aa21.07■□□□□ 0.96
SCARB1-206ENST00000539320 NDUFAF7Q7L592 441 aa21.07■□□□□ 0.96
SCARB1-206ENST00000539320 C17orf64Q86WR6 236 aa21.07■□□□□ 0.96
SCARB1-206ENST00000539320 KBTBD2Q8IY47 623 aa21.07■□□□□ 0.96
SCARB1-206ENST00000539320 SSC4DQ8WTU2 575 aa21.07■□□□□ 0.96
SCARB1-206ENST00000539320 LRRC39Q96DD0 335 aa21.07■□□□□ 0.96
SCARB1-206ENST00000539320 THAP11Q96EK4 314 aa21.07■□□□□ 0.96
SCARB1-206ENST00000539320 CNDP1Q96KN2 507 aa21.07■□□□□ 0.96
SCARB1-206ENST00000539320 PWWP2AQ96N64 755 aa21.07■□□□□ 0.96
SCARB1-206ENST00000539320 TRIM51Q9BSJ1 452 aa21.07■□□□□ 0.96
SCARB1-206ENST00000539320 ATG10Q9H0Y0 220 aa21.07■□□□□ 0.96
SCARB1-206ENST00000539320 RIC8BQ9NVN3 520 aa21.07■□□□□ 0.96
SCARB1-206ENST00000539320 MRPS2Q9Y399 296 aaKnown RBP21.07■□□□□ 0.96
SCARB1-206ENST00000539320 COPG1Q9Y678 874 aaKnown RBP21.07■□□□□ 0.96
SCARB1-206ENST00000539320 KCNE1BA0A087WTH5 132 aa21.06■□□□□ 0.96
SCARB1-206ENST00000539320 PABPN1LA6NDY0 278 aaKnown RBP21.06■□□□□ 0.96
SCARB1-206ENST00000539320 SEMA7AO75326 666 aa21.06■□□□□ 0.96
SCARB1-206ENST00000539320 TSPAN12O95859 305 aa21.06■□□□□ 0.96
SCARB1-206ENST00000539320 FDXRP22570 491 aa21.06■□□□□ 0.96
SCARB1-206ENST00000539320 TSFMP43897 325 aaKnown RBP21.06■□□□□ 0.96
SCARB1-206ENST00000539320 MFAP5Q13361 173 aa21.06■□□□□ 0.96
SCARB1-206ENST00000539320 EIF2S3LQ2VIR3 472 aaKnown RBP21.06■□□□□ 0.96
SCARB1-206ENST00000539320 HP1BP3Q5SSJ5 553 aaPredicted RBP21.06■□□□□ 0.96
SCARB1-206ENST00000539320 HECTD2Q5U5R9 776 aa21.06■□□□□ 0.96
SCARB1-206ENST00000539320 FAM45BPQ6NSW5 357 aa21.06■□□□□ 0.96
SCARB1-206ENST00000539320 HIBCHQ6NVY1 386 aaPredicted RBP21.06■□□□□ 0.96
SCARB1-206ENST00000539320 TRMT10BQ6PF06 316 aaKnown RBP21.06■□□□□ 0.96
SCARB1-206ENST00000539320 LCTLQ6UWM7 567 aa21.06■□□□□ 0.96
SCARB1-206ENST00000539320 CREG2Q8IUH2 290 aa21.06■□□□□ 0.96
SCARB1-206ENST00000539320 FAM45AQ8TCE6 357 aa21.06■□□□□ 0.96
SCARB1-206ENST00000539320 ALKBH8Q96BT7 664 aaKnown RBP21.06■□□□□ 0.96
SCARB1-206ENST00000539320 NAPGQ99747 312 aaPredicted RBP21.06■□□□□ 0.96
SCARB1-206ENST00000539320 SGPP1Q9BX95 441 aa21.06■□□□□ 0.96
SCARB1-206ENST00000539320 NTNG1Q9Y2I2 539 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms