RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 AGXTP21549 392 aa13.07□□□□□ -0.32
CD9-208ENST00000538834 RPS15AP62244 130 aaKnown RBP13.07□□□□□ -0.32
CD9-208ENST00000538834 RPS15P62841 145 aaKnown RBP13.07□□□□□ -0.32
CD9-208ENST00000538834 FAM53BQ14153 422 aa13.07□□□□□ -0.32
CD9-208ENST00000538834 BORAQ6PGQ7 559 aa13.07□□□□□ -0.32
CD9-208ENST00000538834 TTLL10Q6ZVT0 673 aa13.07□□□□□ -0.32
CD9-208ENST00000538834 TRMT10CQ7L0Y3 403 aaKnown RBP13.07□□□□□ -0.32
CD9-208ENST00000538834 C17orf64Q86WR6 236 aa13.07□□□□□ -0.32
CD9-208ENST00000538834 SPATA6LQ8N4H0 392 aa13.07□□□□□ -0.32
CD9-208ENST00000538834 DTWD1Q8N5C7 304 aa13.07□□□□□ -0.32
CD9-208ENST00000538834 RHEBL1Q8TAI7 183 aa13.07□□□□□ -0.32
CD9-208ENST00000538834 SLC39A7Q92504 469 aa13.07□□□□□ -0.32
CD9-208ENST00000538834 NEIL2Q969S2 332 aa13.07□□□□□ -0.32
CD9-208ENST00000538834 NACC2Q96BF6 587 aa13.07□□□□□ -0.32
CD9-208ENST00000538834 C17orf62Q9BQA9 187 aa13.07□□□□□ -0.32
CD9-208ENST00000538834 TMEM79Q9BSE2 394 aa13.07□□□□□ -0.32
CD9-208ENST00000538834 ADNPQ9H2P0 1102 aa13.07□□□□□ -0.32
CD9-208ENST00000538834 SPNS1Q9H2V7 528 aa13.07□□□□□ -0.32
CD9-208ENST00000538834 WDR54Q9H977 334 aa13.07□□□□□ -0.32
CD9-208ENST00000538834 RUVBL1Q9Y265 456 aaKnown RBP13.07□□□□□ -0.32
CD9-208ENST00000538834 CPAMD8Q8IZJ3 1885 aa13.07□□□□□ -0.32
CD9-208ENST00000538834 TXNDC9O14530 226 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 KLK8O60259 260 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 PRAMEF4O60810 478 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 KATNA1O75449 491 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 ACSL3O95573 720 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 GUCA1CO95843 209 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 UMODP07911 640 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 EPORP19235 508 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 SLC12A2P55011 1212 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 ERV3-1Q14264 604 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 CSHL1Q14406 222 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 SSPNQ14714 243 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 NKG7Q16617 165 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 MUM1Q2TAK8 710 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 HKDC1Q2TB90 917 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 C18orf21Q32NC0 220 aaPredicted RBP13.06□□□□□ -0.32
CD9-208ENST00000538834 MROH9Q5TGP6 573 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 C1orf189Q5VU69 101 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 PRAMEF9Q5VWM5 478 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 PRMT9Q6P2P2 845 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 THOC6Q86W42 341 aaKnown RBP13.06□□□□□ -0.32
CD9-208ENST00000538834 PLD3Q8IV08 490 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 OR2Y1Q8NGV0 311 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.06□□□□□ -0.32
CD9-208ENST00000538834 THAP4Q8WY91 577 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 WDR34Q96EX3 536 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 MED8Q96G25 268 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 SPSB2Q99619 263 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 PELI2Q9HAT8 420 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 MLXIPLQ9NP71 852 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 GEMIN8Q9NWZ8 242 aaKnown RBP13.06□□□□□ -0.32
CD9-208ENST00000538834 FETUBQ9UGM5 382 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 POLHQ9Y253 713 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 SLC22A14Q9Y267 594 aa13.06□□□□□ -0.32
CD9-208ENST00000538834 A0A087WUV0 522 aaPredicted RBP13.05□□□□□ -0.32
CD9-208ENST00000538834 TRBC2A0A5B9 178 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 RIPK2O43353 540 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 CEACAM4O75871 244 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 LTA4HP09960 611 aaKnown RBP13.05□□□□□ -0.32
CD9-208ENST00000538834 RHOXF2BP0C7M4 288 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 SMIM10L1P0DMW3 83 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 CDH1P12830 882 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 BCL6P41182 706 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 SERPINB9P50453 376 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 REEP5Q00765 189 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 BMPR2Q13873 1038 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 CATSPEREQ5SY80 951 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 THEMIS2Q5TEJ8 643 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 FAM69BQ5VUD6 431 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 SULT1C3Q6IMI6 304 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 TMEM214Q6NUQ4 689 aaKnown RBP13.05□□□□□ -0.32
CD9-208ENST00000538834 ADGRD1Q6QNK2 874 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 SLCO4C1Q6ZQN7 724 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 TCAIMQ8N3R3 496 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 TMEM151AQ8N4L1 468 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 AFAP1L2Q8N4X5 818 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 CSNK1A1LQ8N752 337 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 AMER3Q8N944 861 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 TTC29Q8NA56 475 aaPredicted RBP13.05□□□□□ -0.32
CD9-208ENST00000538834 MFSD9Q8NBP5 474 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.05□□□□□ -0.32
CD9-208ENST00000538834 NXNL1Q96CM4 212 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 SMIM10Q96HG1 83 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 PAFAH2Q99487 392 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 RHOXF2Q9BQY4 288 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 UNKQ9C0B0 810 aaKnown RBP13.05□□□□□ -0.32
CD9-208ENST00000538834 TGIF2Q9GZN2 237 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 ANKZF1Q9H8Y5 726 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 NMRAL1Q9HBL8 299 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 SNX15Q9NRS6 342 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 TXLNGQ9NUQ3 528 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 ACOT9Q9Y305 439 aa13.05□□□□□ -0.32
CD9-208ENST00000538834 MRPS2Q9Y399 296 aaKnown RBP13.05□□□□□ -0.32
CD9-208ENST00000538834 A0A087X1B8 175 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 A0A1W2PQ72 361 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 KERAO60938 352 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 KLHL2O95198 593 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 TBX6O95947 436 aaPredicted RBP13.04□□□□□ -0.32
CD9-208ENST00000538834 PRKAR1AP10644 381 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms