RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 WDFY2Q96P53 400 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 CDCA4Q9BXL8 241 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 ZNF226Q9NYT6 803 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 GPRC5BQ9NZH0 403 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 TTC3P53804 2025 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 PTPRDP23468 1912 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 SLC35F4A4IF30 521 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 CXCL11O14625 94 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 ALPPP05187 535 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 MED22Q15528 200 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 TRIM60Q495X7 471 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 SLC39A12Q504Y0 691 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 ZRANB3Q5FWF4 1079 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 PDE12Q6L8Q7 609 aaKnown RBP18■□□□□ 0.47
SFSWAP-207ENST00000538548 FAM124AQ86V42 546 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 RDH10Q8IZV5 341 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 OR5H6Q8NGV6 325 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 OR5M11Q96RB7 305 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 BBS2Q9BXC9 721 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 NMRK2Q9NPI5 230 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 MKI67P46013 3256 aaKnown RBP18■□□□□ 0.47
SFSWAP-207ENST00000538548 CASTOR2A6NHX0 329 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 CPNE3O75131 537 aaKnown RBP18■□□□□ 0.47
SFSWAP-207ENST00000538548 CELF2O95319 508 aaKnown RBP18■□□□□ 0.47
SFSWAP-207ENST00000538548 EBLN1P0CF75 366 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 PRPS2P11908 318 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 AZGP1P25311 298 aaKnown RBP18■□□□□ 0.47
SFSWAP-207ENST00000538548 YBEYP58557 167 aaPredicted RBP18■□□□□ 0.47
SFSWAP-207ENST00000538548 DUSP28Q4G0W2 176 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 RAP1GAP2Q684P5 730 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 MSANTD1Q6ZTZ1 278 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 TCTE3Q8IZS6 198 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 VWA5B2Q8N398 1253 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 OR10T2Q8NGX3 314 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 CHTF18Q8WVB6 975 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 BHMTQ93088 406 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 FEVQ99581 238 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 PAAF1Q9BRP4 392 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 NTMT1Q9BV86 223 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 RUBCNLQ9H714 662 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 CPA4Q9UI42 421 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 DNMT3LQ9UJW3 386 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 PPT2Q9UMR5 302 aa18■□□□□ 0.47
SFSWAP-207ENST00000538548 CLIC1O00299 241 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 GPX5O75715 221 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 MYL9P24844 172 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 GDF5P43026 501 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 CD83Q01151 205 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 FAPQ12884 760 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 TARDBPQ13148 414 aaKnown RBP eCLIP17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 ARHGEF6Q15052 776 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 PTOV1Q86YD1 416 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 ULK4Q96C45 1275 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 CD244Q9BZW8 370 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 ABCB8Q9NUT2 735 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 TAS2R16Q9NYV7 291 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 NT5C1B-RDH14C9J2C7 533 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 ARHGEF15O94989 841 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 GPX2P18283 190 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 OR1E1P30953 314 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 IL12RB1P42701 662 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 CRYBB1P53674 252 aaPredicted RBP17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 ABRQ12979 859 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 TAB1Q15750 504 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 CIR1Q86X95 450 aaPredicted RBP17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 PLCZ1Q86YW0 608 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 CPA6Q8N4T0 437 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 B3GNT7Q8NFL0 401 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 NELL1Q92832 810 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 SNAPC3Q92966 411 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 TPD52L3Q96J77 140 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 TSSK3Q96PN8 268 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 MGME1Q9BQP7 344 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 TAPBPLQ9BX59 468 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 ASPNQ9BXN1 380 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 BEX2Q9BXY8 128 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 ACPTQ9BZG2 426 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 PDFQ9HBH1 243 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 ZNF451Q9Y4E5 1061 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 PCDHGA2Q9Y5H1 932 aa17.99■□□□□ 0.47
SFSWAP-207ENST00000538548 CCL15-CCL14A0A0B4J2E2 113 aa17.98■□□□□ 0.47
SFSWAP-207ENST00000538548 LINC00854A0A1B0GVQ3 168 aa17.98■□□□□ 0.47
SFSWAP-207ENST00000538548 LOC730098B7Z3J9 87 aa17.98■□□□□ 0.47
SFSWAP-207ENST00000538548 PDHXO00330 501 aa17.98■□□□□ 0.47
SFSWAP-207ENST00000538548 ENGP17813 658 aa17.98■□□□□ 0.47
SFSWAP-207ENST00000538548 RPL9P32969 192 aaKnown RBP17.98■□□□□ 0.47
SFSWAP-207ENST00000538548 RPS19P39019 145 aaKnown RBP17.98■□□□□ 0.47
SFSWAP-207ENST00000538548 CACNB2Q08289 660 aaPredicted RBP17.98■□□□□ 0.47
SFSWAP-207ENST00000538548 SSX1Q16384 188 aa17.98■□□□□ 0.47
SFSWAP-207ENST00000538548 CCL15Q16663 113 aa17.98■□□□□ 0.47
SFSWAP-207ENST00000538548 UPP1Q16831 310 aa17.98■□□□□ 0.47
SFSWAP-207ENST00000538548 TRIM71Q2Q1W2 868 aaKnown RBP17.98■□□□□ 0.47
SFSWAP-207ENST00000538548 LDLRAD1Q5T700 205 aa17.98■□□□□ 0.47
SFSWAP-207ENST00000538548 LAX1Q8IWV1 398 aa17.98■□□□□ 0.47
SFSWAP-207ENST00000538548 TTC16Q8NEE8 873 aa17.98■□□□□ 0.47
SFSWAP-207ENST00000538548 FRMD6Q96NE9 622 aa17.98■□□□□ 0.47
SFSWAP-207ENST00000538548 EGFL8Q99944 293 aa17.98■□□□□ 0.47
SFSWAP-207ENST00000538548 TTLL2Q9BWV7 592 aa17.98■□□□□ 0.47
SFSWAP-207ENST00000538548 SLC29A3Q9BZD2 475 aa17.98■□□□□ 0.47
SFSWAP-207ENST00000538548 BARHL1Q9BZE3 327 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms