RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 FER1L6-AS2Q96M78 137 aa16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 GPR22Q99680 433 aa16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 RBBP8Q99708 897 aa16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 SLC25A23Q9BV35 468 aa16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 FAM129AQ9BZQ8 928 aa16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 LRRC4CQ9HCJ2 640 aa16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 ABCF3Q9NUQ8 709 aa16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 CTSFQ9UBX1 484 aa16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 SH2B3Q9UQQ2 575 aa16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 MTO1Q9Y2Z2 717 aaKnown RBP16.38■□□□□ 0.21
SFSWAP-205ENST00000537164 AGPSO00116 658 aa16.37■□□□□ 0.21
SFSWAP-205ENST00000537164 P2RX6O15547 441 aa16.37■□□□□ 0.21
SFSWAP-205ENST00000537164 PDGFAP04085 211 aa16.37■□□□□ 0.21
SFSWAP-205ENST00000537164 GP5P40197 560 aa16.37■□□□□ 0.21
SFSWAP-205ENST00000537164 SLC26A3P40879 764 aa16.37■□□□□ 0.21
SFSWAP-205ENST00000537164 CASRP41180 1078 aa16.37■□□□□ 0.21
SFSWAP-205ENST00000537164 CCL11P51671 97 aa16.37■□□□□ 0.21
SFSWAP-205ENST00000537164 FOXL2P58012 376 aa16.37■□□□□ 0.21
SFSWAP-205ENST00000537164 SLC7A5Q01650 507 aa16.37■□□□□ 0.21
SFSWAP-205ENST00000537164 KLRB1Q12918 225 aa16.37■□□□□ 0.21
SFSWAP-205ENST00000537164 DSG2Q14126 1118 aa16.37■□□□□ 0.21
SFSWAP-205ENST00000537164 ASB18Q6ZVZ8 466 aa16.37■□□□□ 0.21
SFSWAP-205ENST00000537164 PRICKLE2Q7Z3G6 844 aa16.37■□□□□ 0.21
SFSWAP-205ENST00000537164 ADCK2Q7Z695 626 aa16.37■□□□□ 0.21
SFSWAP-205ENST00000537164 PLD3Q8IV08 490 aa16.37■□□□□ 0.21
SFSWAP-205ENST00000537164 MMGT1Q8N4V1 131 aa16.37■□□□□ 0.21
SFSWAP-205ENST00000537164 OR4K3Q96R72 315 aa16.37■□□□□ 0.21
SFSWAP-205ENST00000537164 DERL2Q9GZP9 239 aa16.37■□□□□ 0.21
SFSWAP-205ENST00000537164 GPAMQ9HCL2 828 aa16.37■□□□□ 0.21
SFSWAP-205ENST00000537164 P4HTMQ9NXG6 502 aa16.37■□□□□ 0.21
SFSWAP-205ENST00000537164 ZNF282Q9UDV7 671 aaPredicted RBP16.37■□□□□ 0.21
SFSWAP-205ENST00000537164 OARD1Q9Y530 152 aa16.37■□□□□ 0.21
SFSWAP-205ENST00000537164 DOCK10Q96BY6 2186 aa16.36■□□□□ 0.21
SFSWAP-205ENST00000537164 PABPN1LA6NDY0 278 aaKnown RBP16.36■□□□□ 0.21
SFSWAP-205ENST00000537164 KIF2AO00139 706 aaPredicted RBP16.36■□□□□ 0.21
SFSWAP-205ENST00000537164 CDC7O00311 574 aa16.36■□□□□ 0.21
SFSWAP-205ENST00000537164 PEX12O00623 359 aa16.36■□□□□ 0.21
SFSWAP-205ENST00000537164 PRPF4O43172 522 aaKnown RBP eCLIP16.36■□□□□ 0.21
SFSWAP-205ENST00000537164 FOXS1O43638 330 aa16.36■□□□□ 0.21
SFSWAP-205ENST00000537164 NR1D1P20393 614 aa16.36■□□□□ 0.21
SFSWAP-205ENST00000537164 SAT1P21673 171 aa16.36■□□□□ 0.21
SFSWAP-205ENST00000537164 NAB1Q13506 487 aa16.36■□□□□ 0.21
SFSWAP-205ENST00000537164 ZKSCAN8Q15776 578 aaPredicted RBP16.36■□□□□ 0.21
SFSWAP-205ENST00000537164 KBTBD12Q3ZCT8 623 aa16.36■□□□□ 0.21
SFSWAP-205ENST00000537164 ADAMTSL2Q86TH1 951 aa16.36■□□□□ 0.21
SFSWAP-205ENST00000537164 HPS6Q86YV9 775 aa16.36■□□□□ 0.21
SFSWAP-205ENST00000537164 METTL27Q8N6F8 245 aaPredicted RBP16.36■□□□□ 0.21
SFSWAP-205ENST00000537164 STT3BQ8TCJ2 826 aa16.36■□□□□ 0.21
SFSWAP-205ENST00000537164 COL26A1Q96A83 441 aa16.36■□□□□ 0.21
SFSWAP-205ENST00000537164 PYCR2Q96C36 320 aa16.36■□□□□ 0.21
SFSWAP-205ENST00000537164 TSPAN17Q96FV3 270 aa16.36■□□□□ 0.21
SFSWAP-205ENST00000537164 SMAD5Q99717 465 aaKnown RBP16.36■□□□□ 0.21
SFSWAP-205ENST00000537164 TGIF2Q9GZN2 237 aa16.36■□□□□ 0.21
SFSWAP-205ENST00000537164 DRC3Q9H069 523 aa16.36■□□□□ 0.21
SFSWAP-205ENST00000537164 SEMA3GQ9NS98 782 aa16.36■□□□□ 0.21
SFSWAP-205ENST00000537164 TXNDC16Q9P2K2 825 aa16.36■□□□□ 0.21
SFSWAP-205ENST00000537164 MAU2Q9Y6X3 613 aa16.36■□□□□ 0.21
SFSWAP-205ENST00000537164 ESYT3A0FGR9 886 aa16.35■□□□□ 0.21
SFSWAP-205ENST00000537164 SOCS6O14544 535 aa16.35■□□□□ 0.21
SFSWAP-205ENST00000537164 LCMT2O60294 686 aaKnown RBP16.35■□□□□ 0.21
SFSWAP-205ENST00000537164 GUCA1CO95843 209 aa16.35■□□□□ 0.21
SFSWAP-205ENST00000537164 ZGLP1P0C6A0 271 aa16.35■□□□□ 0.21
SFSWAP-205ENST00000537164 CDH1P12830 882 aa16.35■□□□□ 0.21
SFSWAP-205ENST00000537164 FBLP22087 321 aaKnown RBP16.35■□□□□ 0.21
SFSWAP-205ENST00000537164 STX2P32856 288 aa16.35■□□□□ 0.21
SFSWAP-205ENST00000537164 SPRP35270 261 aaPredicted RBP16.35■□□□□ 0.21
SFSWAP-205ENST00000537164 HNMTP50135 292 aa16.35■□□□□ 0.21
SFSWAP-205ENST00000537164 PGDP52209 483 aa16.35■□□□□ 0.21
SFSWAP-205ENST00000537164 SLC12A2P55011 1212 aa16.35■□□□□ 0.21
SFSWAP-205ENST00000537164 OCA2Q04671 838 aa16.35■□□□□ 0.21
SFSWAP-205ENST00000537164 KLC1Q07866 573 aa16.35■□□□□ 0.21
SFSWAP-205ENST00000537164 GRTP1Q5TC63 336 aa16.35■□□□□ 0.21
SFSWAP-205ENST00000537164 CCDC25Q86WR0 208 aa16.35■□□□□ 0.21
SFSWAP-205ENST00000537164 RELL1Q8IUW5 271 aa16.35■□□□□ 0.21
SFSWAP-205ENST00000537164 KLHDC8AQ8IYD2 350 aa16.35■□□□□ 0.21
SFSWAP-205ENST00000537164 AMER3Q8N944 861 aa16.35■□□□□ 0.21
SFSWAP-205ENST00000537164 CLEC1AQ8NC01 280 aa16.35■□□□□ 0.21
SFSWAP-205ENST00000537164 FDCSPQ8NFU4 85 aa16.35■□□□□ 0.21
SFSWAP-205ENST00000537164 UBXN10Q96LJ8 280 aa16.35■□□□□ 0.21
SFSWAP-205ENST00000537164 NUDT9Q9BW91 350 aa16.35■□□□□ 0.21
SFSWAP-205ENST00000537164 CTNNAL1Q9UBT7 734 aa16.35■□□□□ 0.21
SFSWAP-205ENST00000537164 MAP4K5Q9Y4K4 846 aa16.35■□□□□ 0.21
SFSWAP-205ENST00000537164 HS3ST3B1Q9Y662 390 aa16.35■□□□□ 0.21
SFSWAP-205ENST00000537164 ASH1LQ9NR48 2969 aaKnown RBP16.35■□□□□ 0.21
SFSWAP-205ENST00000537164 A0A1W2PQ72 361 aa16.34■□□□□ 0.21
SFSWAP-205ENST00000537164 NPEPPSL1A6NEC2 478 aa16.34■□□□□ 0.21
SFSWAP-205ENST00000537164 ANXA5P08758 320 aa16.34■□□□□ 0.21
SFSWAP-205ENST00000537164 STMN1P16949 149 aa16.34■□□□□ 0.21
SFSWAP-205ENST00000537164 GRK3P35626 688 aa16.34■□□□□ 0.21
SFSWAP-205ENST00000537164 BCL6P41182 706 aa16.34■□□□□ 0.21
SFSWAP-205ENST00000537164 CCR8P51685 355 aa16.34■□□□□ 0.21
SFSWAP-205ENST00000537164 USP10Q14694 798 aaKnown RBP16.34■□□□□ 0.21
SFSWAP-205ENST00000537164 TSNQ15631 228 aaKnown RBP16.34■□□□□ 0.21
SFSWAP-205ENST00000537164 NDUFA9Q16795 377 aa16.34■□□□□ 0.21
SFSWAP-205ENST00000537164 CDKL4Q5MAI5 379 aa16.34■□□□□ 0.21
SFSWAP-205ENST00000537164 TMEM214Q6NUQ4 689 aaKnown RBP16.34■□□□□ 0.21
SFSWAP-205ENST00000537164 KIRREL2Q6UWL6 708 aa16.34■□□□□ 0.21
SFSWAP-205ENST00000537164 CAMKVQ8NCB2 501 aa16.34■□□□□ 0.21
SFSWAP-205ENST00000537164 MNS1Q8NEH6 495 aa16.34■□□□□ 0.21
SFSWAP-205ENST00000537164 FBF1Q8TES7 1133 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms