RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 METTL6Q8TCB7 284 aa11.54□□□□□ -0.56
CLIP1-208ENST00000537004 SKA2Q8WVK7 121 aaPredicted RBP11.54□□□□□ -0.56
CLIP1-208ENST00000537004 CCT7Q99832 543 aa11.54□□□□□ -0.56
CLIP1-208ENST00000537004 SDR39U1Q9NRG7 319 aaPredicted RBP11.54□□□□□ -0.56
CLIP1-208ENST00000537004 EVA1BQ9NVM1 165 aa11.54□□□□□ -0.56
CLIP1-208ENST00000537004 OPTCQ9UBM4 332 aa11.54□□□□□ -0.56
CLIP1-208ENST00000537004 PACSIN3Q9UKS6 424 aa11.54□□□□□ -0.56
CLIP1-208ENST00000537004 ATXN7L1Q9ULK2 861 aaPredicted RBP11.54□□□□□ -0.56
CLIP1-208ENST00000537004 OR2AG2A6NM03 316 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 KPNA5O15131 536 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 SGTAO43765 313 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 NUAK1O60285 661 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 FKBP6O75344 327 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 KATNA1O75449 491 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 AP2A2O94973 939 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 RPLP0P05388 317 aaKnown RBP11.53□□□□□ -0.56
CLIP1-208ENST00000537004 ACP5P13686 325 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 GLB1P16278 677 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 AP2B1P63010 937 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 LRP8Q14114 963 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 GSTA3Q16772 222 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 ISXQ2M1V0 245 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 LDLRAP1Q5SW96 308 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 PLEKHS1Q5SXH7 462 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 METTL2BQ6P1Q9 378 aaKnown RBP11.53□□□□□ -0.56
CLIP1-208ENST00000537004 UBE2R2Q712K3 238 aaPredicted RBP11.53□□□□□ -0.56
CLIP1-208ENST00000537004 SPATA19Q7Z5L4 167 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 ADGRG6Q86SQ4 1221 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 VRK3Q8IV63 474 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 JADE3Q92613 823 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 GLYATL1Q969I3 302 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 VPS35Q96QK1 796 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 RIC8BQ9NVN3 520 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 ARL15Q9NXU5 204 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 PDE10AQ9Y233 779 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 ANGPTL3Q9Y5C1 460 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 TMEM8BA6NDV4 472 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 MRASO14807 208 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 NRP2O60462 931 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 BRINP1O60477 761 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 FTH1P02794 183 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 C8GP07360 202 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 ANXA5P08758 320 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 MPC1LP0DKB6 136 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 GCKP35557 465 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 DIO3P55073 304 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 IRX1P78414 480 aaPredicted RBP11.53□□□□□ -0.56
CLIP1-208ENST00000537004 CEACAM7Q14002 265 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 RPS6KA2Q15349 733 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 PLA2G4EQ3MJ16 856 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 CDKL4Q5MAI5 379 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 AAGABQ6PD74 315 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 CRTC3Q6UUV7 619 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 TMPRSS9Q7Z410 1059 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 MILR1Q7Z6M3 343 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 ZNF761Q86XN6 746 aaPredicted RBP11.53□□□□□ -0.56
CLIP1-208ENST00000537004 ARL14Q8N4G2 192 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 BEND7Q8N7W2 519 aaPredicted RBP11.53□□□□□ -0.56
CLIP1-208ENST00000537004 ASB11Q8WXH4 323 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 ELMO1Q92556 727 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 PARVBQ9HBI1 364 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 TBC1D29Q9UFV1 150 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 SLC23A2Q9UGH3 650 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 RALYQ9UKM9 306 aaKnown RBP11.53□□□□□ -0.56
CLIP1-208ENST00000537004 PCDHGA7Q9Y5G6 932 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 ENTPD2Q9Y5L3 495 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 GPR45Q9Y5Y3 372 aa11.53□□□□□ -0.56
CLIP1-208ENST00000537004 UNC13CQ8NB66 2214 aa11.52□□□□□ -0.56
CLIP1-208ENST00000537004 K7EPI3 171 aa11.52□□□□□ -0.56
CLIP1-208ENST00000537004 NR5A2O00482 541 aa11.52□□□□□ -0.56
CLIP1-208ENST00000537004 NTN3O00634 580 aaPredicted RBP11.52□□□□□ -0.56
CLIP1-208ENST00000537004 STK16O75716 305 aa11.52□□□□□ -0.56
CLIP1-208ENST00000537004 MATN4O95460 622 aa11.52□□□□□ -0.56
CLIP1-208ENST00000537004 ENO2P09104 434 aaPredicted RBP11.52□□□□□ -0.56
CLIP1-208ENST00000537004 ANPEPP15144 967 aa11.52□□□□□ -0.56
CLIP1-208ENST00000537004 EPB42P16452 691 aa11.52□□□□□ -0.56
CLIP1-208ENST00000537004 ALDH4A1P30038 563 aa11.52□□□□□ -0.56
CLIP1-208ENST00000537004 HTR6P50406 440 aa11.52□□□□□ -0.56
CLIP1-208ENST00000537004 OR1D5P58170 312 aa11.52□□□□□ -0.56
CLIP1-208ENST00000537004 PSME3P61289 254 aa11.52□□□□□ -0.56
CLIP1-208ENST00000537004 ERVK-8P63133 956 aa11.52□□□□□ -0.56
CLIP1-208ENST00000537004 SPIDRQ14159 915 aa11.52□□□□□ -0.56
CLIP1-208ENST00000537004 AMZ1Q400G9 498 aa11.52□□□□□ -0.56
CLIP1-208ENST00000537004 RBM44Q6ZP01 1051 aaKnown RBP11.52□□□□□ -0.56
CLIP1-208ENST00000537004 LRRC74BQ6ZQY2 392 aa11.52□□□□□ -0.56
CLIP1-208ENST00000537004 C17orf82Q86X59 251 aaPredicted RBP11.52□□□□□ -0.56
CLIP1-208ENST00000537004 HIPK4Q8NE63 616 aa11.52□□□□□ -0.56
CLIP1-208ENST00000537004 SLC26A7Q8TE54 656 aa11.52□□□□□ -0.56
CLIP1-208ENST00000537004 NRG4Q8WWG1 115 aa11.52□□□□□ -0.56
CLIP1-208ENST00000537004 ASZ1Q8WWH4 475 aa11.52□□□□□ -0.56
CLIP1-208ENST00000537004 PYDC1Q8WXC3 89 aa11.52□□□□□ -0.56
CLIP1-208ENST00000537004 DEPDC7Q96QD5 511 aa11.52□□□□□ -0.56
CLIP1-208ENST00000537004 SLC12A9Q9BXP2 914 aa11.52□□□□□ -0.56
CLIP1-208ENST00000537004 TRIM54Q9BYV2 358 aa11.52□□□□□ -0.56
CLIP1-208ENST00000537004 TRIM39Q9HCM9 518 aa11.52□□□□□ -0.56
CLIP1-208ENST00000537004 BATF3Q9NR55 127 aa11.52□□□□□ -0.56
CLIP1-208ENST00000537004 AIG1Q9NVV5 245 aa11.52□□□□□ -0.56
CLIP1-208ENST00000537004 BBIP1A8MTZ0 92 aa11.52□□□□□ -0.57
CLIP1-208ENST00000537004 QSOX1O00391 747 aa11.52□□□□□ -0.57
CLIP1-208ENST00000537004 PPM1DO15297 605 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms