RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 APOBEC3GQ9HC16 384 aaKnown RBP3.61□□□□□ -1.83
MCF2-210ENST00000536274 CD93Q9NPY3 652 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 NSMCE4AQ9NXX6 385 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 USE1Q9NZ43 259 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 FKBPLQ9UIM3 349 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 DTX4Q9Y2E6 619 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 GRIP1Q9Y3R0 1128 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 ZNF451Q9Y4E5 1061 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 KLF2Q9Y5W3 355 aaPredicted RBP3.61□□□□□ -1.83
MCF2-210ENST00000536274 A0A1B0GTL3 188 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 A0A1W2PPL8 197 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 OR2A25A4D2G3 310 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 H0YC42 278 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 GPR182O15218 404 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 TXNL1O43396 289 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 GPX5O75715 221 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 ADH1CP00326 375 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 F12P00748 615 aaPredicted RBP3.61□□□□□ -1.83
MCF2-210ENST00000536274 HBQ1P09105 142 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 CTSHP09668 335 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 MIPP30301 263 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 HOXC13P31276 330 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 GPX4P36969 197 aaPredicted RBP3.61□□□□□ -1.83
MCF2-210ENST00000536274 RPS19P39019 145 aaKnown RBP3.61□□□□□ -1.83
MCF2-210ENST00000536274 MMP12P39900 470 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 PBX3P40426 434 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 CTSKP43235 329 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 AGFG1P52594 562 aaKnown RBP3.61□□□□□ -1.83
MCF2-210ENST00000536274 AKR1C2P52895 323 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 ATXN1P54253 815 aaKnown RBP3.61□□□□□ -1.83
MCF2-210ENST00000536274 FOXA1P55317 472 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 CNTN2Q02246 1040 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 AKR1C1Q04828 323 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 RUNX1T1Q06455 604 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 FGL1Q08830 312 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 DUSP4Q13115 394 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 QPRTQ15274 297 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 TARBP2Q15633 366 aaKnown RBP3.61□□□□□ -1.83
MCF2-210ENST00000536274 PYDC2Q56P42 97 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 RNASE12Q5GAN4 147 aaKnown RBP3.61□□□□□ -1.83
MCF2-210ENST00000536274 ARMCX4Q5H9R4 360 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 ZNF484Q5JVG2 852 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 ACER2Q5QJU3 275 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 MFSD14BQ5SR56 506 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 SYT6Q5T7P8 510 aaPredicted RBP3.61□□□□□ -1.83
MCF2-210ENST00000536274 SYPL2Q5VXT5 272 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 GPR139Q6DWJ6 353 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 SHQ1Q6PI26 577 aaKnown RBP3.61□□□□□ -1.83
MCF2-210ENST00000536274 ALKAL2Q6UX46 152 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 CYHR1Q6ZMK1 362 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 CATSPERGQ6ZRH7 1159 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 DPP9Q86TI2 863 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 ADGRG3Q86Y34 549 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 CCDC71Q8IV32 467 aaPredicted RBP3.61□□□□□ -1.83
MCF2-210ENST00000536274 RASGRP3Q8IV61 690 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 TCTE3Q8IZS6 198 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 VWA5B2Q8N398 1253 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 WDTC1Q8N5D0 677 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 AMER2Q8N7J2 671 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 DCBLD1Q8N8Z6 715 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 ZNF511Q8NB15 262 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 CLRN3Q8NCR9 226 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 TRMT10AQ8TBZ6 339 aaKnown RBP3.61□□□□□ -1.83
MCF2-210ENST00000536274 PHOSPHO1Q8TCT1 267 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 SNX33Q8WV41 574 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 KLHL6Q8WZ60 621 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 DNASE1L2Q92874 299 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 ZNF775Q96BV0 537 aaPredicted RBP3.61□□□□□ -1.83
MCF2-210ENST00000536274 QRFPRQ96P65 431 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 OR5M11Q96RB7 305 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 HBEGFQ99075 208 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 FAM213AQ9BRX8 229 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 YTHDF1Q9BYJ9 559 aaKnown RBP3.61□□□□□ -1.83
MCF2-210ENST00000536274 SLC29A3Q9BZD2 475 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 TMEM245Q9H330 911 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 POMKQ9H5K3 350 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 TM9SF3Q9HD45 589 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 PRMT8Q9NR22 394 aaPredicted RBP3.61□□□□□ -1.83
MCF2-210ENST00000536274 SMPD4Q9NXE4 827 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 SH3BP4Q9P0V3 963 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 CPA4Q9UI42 421 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 CYTH4Q9UIA0 394 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 GPR160Q9UJ42 338 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 NDRG2Q9UN36 371 aaKnown RBP3.61□□□□□ -1.83
MCF2-210ENST00000536274 MAPRE3Q9UPY8 281 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 LIPT1Q9Y234 373 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 PCDHB5Q9Y5E4 795 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 AUP1Q9Y679 476 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 SMCHD1A6NHR9 2005 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 PLXNA1Q9UIW2 1896 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 LOC105369274A0A096LPK9 316 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 hCG_1807616A0A1W2PRN6 198 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 ASPDHA6ND91 283 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 TMEM200CA6NKL6 621 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 MYO1GB0I1T2 1018 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 UBFD1O14562 309 aaKnown RBP3.61□□□□□ -1.83
MCF2-210ENST00000536274 TRDMT1O14717 391 aaKnown RBP3.61□□□□□ -1.83
MCF2-210ENST00000536274 APOL1O14791 398 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 MYL12BO14950 172 aa3.61□□□□□ -1.83
MCF2-210ENST00000536274 RGS10O43665 173 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 296.4 ms