RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 NDUFAF2Q8N183 169 aa3.33□□□□□ -1.88
VBP1-203ENST00000535916 SERAC1Q96JX3 654 aa3.33□□□□□ -1.88
VBP1-203ENST00000535916 FAM71F1Q96KD3 344 aaPredicted RBP3.33□□□□□ -1.88
VBP1-203ENST00000535916 CCDC28BQ9BUN5 200 aa3.33□□□□□ -1.88
VBP1-203ENST00000535916 Q9H8V8 135 aa3.33□□□□□ -1.88
VBP1-203ENST00000535916 MYNNQ9NPC7 610 aa3.33□□□□□ -1.88
VBP1-203ENST00000535916 SLC35C2Q9NQQ7 365 aa3.33□□□□□ -1.88
VBP1-203ENST00000535916 STK26Q9P289 416 aa3.33□□□□□ -1.88
VBP1-203ENST00000535916 PLCL2Q9UPR0 1127 aa3.33□□□□□ -1.88
VBP1-203ENST00000535916 A0A1W2PQ09 198 aa3.32□□□□□ -1.88
VBP1-203ENST00000535916 SRRM4A7MD48 611 aaKnown RBP3.32□□□□□ -1.88
VBP1-203ENST00000535916 IRF2P14316 349 aa3.32□□□□□ -1.88
VBP1-203ENST00000535916 MYOGP15173 224 aa3.32□□□□□ -1.88
VBP1-203ENST00000535916 NRIP1P48552 1158 aa3.32□□□□□ -1.88
VBP1-203ENST00000535916 ALDH3A2P51648 485 aa3.32□□□□□ -1.88
VBP1-203ENST00000535916 PRELPP51888 382 aa3.32□□□□□ -1.88
VBP1-203ENST00000535916 CCDC30Q5VVM6 783 aa3.32□□□□□ -1.88
VBP1-203ENST00000535916 OR4A47Q6IF82 309 aa3.32□□□□□ -1.88
VBP1-203ENST00000535916 MFSD12Q6NUT3 480 aa3.32□□□□□ -1.88
VBP1-203ENST00000535916 CCBE1Q6UXH8 406 aaPredicted RBP3.32□□□□□ -1.88
VBP1-203ENST00000535916 MCUQ8NE86 351 aa3.32□□□□□ -1.88
VBP1-203ENST00000535916 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.32□□□□□ -1.88
VBP1-203ENST00000535916 PIK3R3Q92569 461 aa3.32□□□□□ -1.88
VBP1-203ENST00000535916 SPACA9Q96E40 222 aaPredicted RBP3.32□□□□□ -1.88
VBP1-203ENST00000535916 TREX2Q9BQ50 279 aaPredicted RBP3.32□□□□□ -1.88
VBP1-203ENST00000535916 CHCHD6Q9BRQ6 235 aa3.32□□□□□ -1.88
VBP1-203ENST00000535916 NLGN3Q9NZ94 848 aa3.32□□□□□ -1.88
VBP1-203ENST00000535916 PRDM4Q9UKN5 801 aa3.32□□□□□ -1.88
VBP1-203ENST00000535916 TTLL3Q9Y4R7 772 aa3.32□□□□□ -1.88
VBP1-203ENST00000535916 ARID2Q68CP9 1835 aa3.32□□□□□ -1.88
VBP1-203ENST00000535916 IGHV3-20A0A0C4DH32 117 aa3.31□□□□□ -1.88
VBP1-203ENST00000535916 ANKRD18BA2A2Z9 1011 aa3.31□□□□□ -1.88
VBP1-203ENST00000535916 AGAP14A8MT82 685 aa3.31□□□□□ -1.88
VBP1-203ENST00000535916 TRAFD1O14545 582 aaPredicted RBP3.31□□□□□ -1.88
VBP1-203ENST00000535916 ECE2O60344 883 aa3.31□□□□□ -1.88
VBP1-203ENST00000535916 PRDM1O75626 825 aa3.31□□□□□ -1.88
VBP1-203ENST00000535916 THY1P04216 161 aa3.31□□□□□ -1.88
VBP1-203ENST00000535916 FDPSP14324 419 aaKnown RBP3.31□□□□□ -1.88
VBP1-203ENST00000535916 MATR3P43243 847 aaKnown RBP eCLIP3.31□□□□□ -1.88
VBP1-203ENST00000535916 RAD52P43351 418 aa3.31□□□□□ -1.88
VBP1-203ENST00000535916 DCDC1P59894 354 aa3.31□□□□□ -1.88
VBP1-203ENST00000535916 TRAP1Q12931 704 aaKnown RBP3.31□□□□□ -1.88
VBP1-203ENST00000535916 SRSF9Q13242 221 aaKnown RBP eCLIP3.31□□□□□ -1.88
VBP1-203ENST00000535916 EIF4EBP2Q13542 120 aaPredicted RBP3.31□□□□□ -1.88
VBP1-203ENST00000535916 VEZF1Q14119 521 aa3.31□□□□□ -1.88
VBP1-203ENST00000535916 ALDH1L2Q3SY69 923 aa3.31□□□□□ -1.88
VBP1-203ENST00000535916 FAM133BQ5BKY9 247 aaKnown RBP3.31□□□□□ -1.88
VBP1-203ENST00000535916 PLEKHS1Q5SXH7 462 aa3.31□□□□□ -1.88
VBP1-203ENST00000535916 ZC3H3Q8IXZ2 948 aaKnown RBP3.31□□□□□ -1.88
VBP1-203ENST00000535916 LSMEM1Q8N8F7 131 aa3.31□□□□□ -1.88
VBP1-203ENST00000535916 POC5Q8NA72 575 aa3.31□□□□□ -1.88
VBP1-203ENST00000535916 SSC4DQ8WTU2 575 aa3.31□□□□□ -1.88
VBP1-203ENST00000535916 SEPHS2Q99611 448 aa3.31□□□□□ -1.88
VBP1-203ENST00000535916 BARD1Q99728 777 aaKnown RBP3.31□□□□□ -1.88
VBP1-203ENST00000535916 CENPOQ9BU64 300 aa3.31□□□□□ -1.88
VBP1-203ENST00000535916 ZNF581Q9P0T4 197 aa3.31□□□□□ -1.88
VBP1-203ENST00000535916 ELF5Q9UKW6 265 aaPredicted RBP3.31□□□□□ -1.88
VBP1-203ENST00000535916 RALGAPA1Q6GYQ0 2036 aa3.31□□□□□ -1.88
VBP1-203ENST00000535916 IGSF1Q8N6C5 1336 aa3.3□□□□□ -1.88
VBP1-203ENST00000535916 A0A1W2PQ72 361 aa3.3□□□□□ -1.88
VBP1-203ENST00000535916 PLOD3O60568 738 aa3.3□□□□□ -1.88
VBP1-203ENST00000535916 ZNF19P17023 458 aa3.3□□□□□ -1.88
VBP1-203ENST00000535916 NDST2P52849 883 aa3.3□□□□□ -1.88
VBP1-203ENST00000535916 NDUFV3P56181 108 aaKnown RBP3.3□□□□□ -1.88
VBP1-203ENST00000535916 HSPB3Q12988 150 aa3.3□□□□□ -1.88
VBP1-203ENST00000535916 C1QTNF12Q5T7M4 302 aa3.3□□□□□ -1.88
VBP1-203ENST00000535916 ARMC3Q5W041 872 aa3.3□□□□□ -1.88
VBP1-203ENST00000535916 ITPRIPL1Q6GPH6 555 aa3.3□□□□□ -1.88
VBP1-203ENST00000535916 PRR27Q6MZM9 219 aa3.3□□□□□ -1.88
VBP1-203ENST00000535916 CATSPER3Q86XQ3 398 aa3.3□□□□□ -1.88
VBP1-203ENST00000535916 NKAIN3Q8N8D7 197 aa3.3□□□□□ -1.88
VBP1-203ENST00000535916 CSNK1G2-AS1Q8NCQ2 148 aa3.3□□□□□ -1.88
VBP1-203ENST00000535916 OR4D10Q8NGI6 311 aa3.3□□□□□ -1.88
VBP1-203ENST00000535916 SPPL2AQ8TCT8 520 aa3.3□□□□□ -1.88
VBP1-203ENST00000535916 MRAPQ8TCY5 172 aa3.3□□□□□ -1.88
VBP1-203ENST00000535916 NXNL1Q96CM4 212 aa3.3□□□□□ -1.88
VBP1-203ENST00000535916 EGLN3Q9H6Z9 239 aa3.3□□□□□ -1.88
VBP1-203ENST00000535916 ANKEF1Q9NU02 776 aa3.3□□□□□ -1.88
VBP1-203ENST00000535916 NKIRAS2Q9NYR9 191 aa3.3□□□□□ -1.88
VBP1-203ENST00000535916 ZNF215Q9UL58 517 aaPredicted RBP3.3□□□□□ -1.88
VBP1-203ENST00000535916 NOL7Q9UMY1 257 aaKnown RBP3.3□□□□□ -1.88
VBP1-203ENST00000535916 LOC100509620A0A075B734 347 aa3.29□□□□□ -1.88
VBP1-203ENST00000535916 C2CD4DB7Z1M9 353 aa3.29□□□□□ -1.88
VBP1-203ENST00000535916 CCL24O00175 119 aa3.29□□□□□ -1.88
VBP1-203ENST00000535916 HAT1O14929 419 aa3.29□□□□□ -1.88
VBP1-203ENST00000535916 SH3BGRLO75368 114 aa3.29□□□□□ -1.88
VBP1-203ENST00000535916 KRT6AP02538 564 aa3.29□□□□□ -1.88
VBP1-203ENST00000535916 KRT6BP04259 564 aa3.29□□□□□ -1.88
VBP1-203ENST00000535916 GCH1P30793 250 aa3.29□□□□□ -1.88
VBP1-203ENST00000535916 KRT6CP48668 564 aa3.29□□□□□ -1.88
VBP1-203ENST00000535916 MEA1Q16626 185 aa3.29□□□□□ -1.88
VBP1-203ENST00000535916 DUSP28Q4G0W2 176 aa3.29□□□□□ -1.88
VBP1-203ENST00000535916 FAM205BPQ63HN1 556 aa3.29□□□□□ -1.88
VBP1-203ENST00000535916 TMEM64Q6YI46 380 aa3.29□□□□□ -1.88
VBP1-203ENST00000535916 IL17RELQ6ZVW7 336 aa3.29□□□□□ -1.88
VBP1-203ENST00000535916 SLC24A5Q71RS6 500 aa3.29□□□□□ -1.88
VBP1-203ENST00000535916 OR10S1Q8NGN2 331 aa3.29□□□□□ -1.88
VBP1-203ENST00000535916 AGAP11Q8TF27 550 aa3.29□□□□□ -1.88
VBP1-203ENST00000535916 METTL21AQ8WXB1 218 aa3.29□□□□□ -1.88
VBP1-203ENST00000535916 FAM120BQ96EK7 910 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms