RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 TMED5Q9Y3A6 229 aa17.67■□□□□ 0.42
SFSWAP-203ENST00000535236 PCDHGB2Q9Y5G2 931 aa17.67■□□□□ 0.42
SFSWAP-203ENST00000535236 IL33O95760 270 aa17.67■□□□□ 0.42
SFSWAP-203ENST00000535236 TIGD6Q17RP2 521 aa17.67■□□□□ 0.42
SFSWAP-203ENST00000535236 SLC5A11Q8WWX8 675 aa17.67■□□□□ 0.42
SFSWAP-203ENST00000535236 PKP4Q99569 1192 aa17.67■□□□□ 0.42
SFSWAP-203ENST00000535236 CADM1Q9BY67 442 aaKnown RBP17.67■□□□□ 0.42
SFSWAP-203ENST00000535236 EBF3Q9H4W6 596 aa17.67■□□□□ 0.42
SFSWAP-203ENST00000535236 SLIT3O75094 1523 aa17.67■□□□□ 0.42
SFSWAP-203ENST00000535236 CCDC107Q8WV48 283 aa17.67■□□□□ 0.42
SFSWAP-203ENST00000535236 TMCO6Q96DC7 493 aa17.67■□□□□ 0.42
SFSWAP-203ENST00000535236 ZNF717Q9BY31 904 aaPredicted RBP17.67■□□□□ 0.42
SFSWAP-203ENST00000535236 METTL21EPA6NDL7 271 aa17.67■□□□□ 0.42
SFSWAP-203ENST00000535236 EFCAB9A8MZ26 197 aa17.67■□□□□ 0.42
SFSWAP-203ENST00000535236 LEFTY2O00292 366 aa17.67■□□□□ 0.42
SFSWAP-203ENST00000535236 SHOX2O60902 331 aaPredicted RBP17.67■□□□□ 0.42
SFSWAP-203ENST00000535236 HAPLN1P10915 354 aaPredicted RBP17.67■□□□□ 0.42
SFSWAP-203ENST00000535236 PTGES2Q9H7Z7 377 aa17.67■□□□□ 0.42
SFSWAP-203ENST00000535236 ZIM2Q9NZV7 527 aa17.67■□□□□ 0.42
SFSWAP-203ENST00000535236 FAM170BA6NMN3 283 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 PRKCDQ05655 676 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 CCINQ13939 588 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 C4orf46Q504U0 113 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 LIN52Q52LA3 116 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 TMEM139Q8IV31 216 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 LINC00471Q8N535 108 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 GRHL1Q9NZI5 618 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 POFUT2Q9Y2G5 429 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 PPLO60437 1756 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 CLDN25C9JDP6 229 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 AHSA1O95433 338 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 BMP8BP34820 402 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 EIF1AXP47813 144 aaKnown RBP17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 EIF5AP63241 154 aaKnown RBP17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 RBM48Q5RL73 367 aaKnown RBP17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 BMP8AQ7Z5Y6 402 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 TMCO2Q7Z6W1 182 aaPredicted RBP17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 NFKBIDQ8NI38 313 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 MAPK15Q8TD08 544 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 SCGB3A2Q96PL1 93 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 AQP12BA6NM10 295 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 MANBAO00462 879 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 HEXBP07686 556 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 GADD45AP24522 165 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 SMSP52788 366 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 HERC3Q15034 1050 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 GOLGA7Q7Z5G4 137 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 AQP12AQ8IXF9 295 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 C9orf43Q8TAL5 461 aaPredicted RBP17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 TLCD1Q96CP7 247 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 LRRC58Q96CX6 371 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 CPNE2Q96FN4 548 aaPredicted RBP17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 KCTD7Q96MP8 289 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 ZNF358Q9NW07 568 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 AASSQ9UDR5 926 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 PLAGL1Q9UM63 463 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 MROH1Q8NDA8 1641 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 TYRP1P17643 537 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 IL1R2P27930 398 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 DCDC1P59894 354 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 GPR17Q13304 367 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 DAG1Q14118 895 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 CYP27C1Q4G0S4 372 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 NAT8LQ8N9F0 302 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 AQP4P55087 323 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 ST3GAL3Q11203 375 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 FAM189A2Q15884 450 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 OCLNQ16625 522 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 CYP1B1Q16678 543 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 PRRT3Q5FWE3 981 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 RNF220Q5VTB9 566 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 CEP76Q8TAP6 659 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 CGREF1Q99674 301 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 STRADBQ9C0K7 418 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 WASF3Q9UPY6 502 aa17.66■□□□□ 0.42
SFSWAP-203ENST00000535236 PMM2O15305 246 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 HK1P19367 917 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 ITIH1P19827 911 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 CDK6Q00534 326 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 SEMA3AQ14563 771 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 ITPRIPL2Q3MIP1 535 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 SH3D19Q5HYK7 790 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 TMIGD1Q6UXZ0 262 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 ZNF782Q6ZMW2 699 aaPredicted RBP17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 NPLOC4Q8TAT6 608 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 THEM6Q8WUY1 208 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 IL4I1Q96RQ9 567 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 EBF4Q9BQW3 602 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 SMURF1Q9HCE7 757 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 KDM4FA0A1W2PPD8 638 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 LOC730098B7Z3J9 87 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 GRID2O43424 1007 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 ITGA5P08648 1049 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 C8orf89P0DMQ9 161 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 HLA-EP13747 358 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 EIF2S3P41091 472 aaKnown RBP17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 CBLBQ13191 982 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 PDCD4Q53EL6 469 aaKnown RBP17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 SPIN3Q5JUX0 258 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 CEACAM20Q6UY09 585 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms