RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 FOXS1O43638 330 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 CDC40O60508 579 aaKnown RBP eCLIP8.73□□□□□ -1.01
PACS1-214ENST00000533811 SUN1O94901 812 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 METTL18O95568 372 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 GAS8O95995 478 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 PTMAP06454 111 aaKnown RBP8.73□□□□□ -1.01
PACS1-214ENST00000533811 SP1P08047 785 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 AOAHP28039 575 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 PTGER1P34995 402 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 PPARGP37231 505 aaPredicted RBP8.73□□□□□ -1.01
PACS1-214ENST00000533811 AVPR1BP47901 424 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 ZNF75DP51815 510 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 TAS2R50P59544 299 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 PRAMEP78395 509 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 ACTN3Q08043 901 aaPredicted RBP8.73□□□□□ -1.01
PACS1-214ENST00000533811 TRIM14Q14142 442 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 SEMA3AQ14563 771 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 NAA25Q14CX7 972 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 CEBPEQ15744 281 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 NDUFA9Q16795 377 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 PARP6Q2NL67 630 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 GARNL3Q5VVW2 1013 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 KCTD11Q693B1 232 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 SLC25A25Q6KCM7 469 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 VSTM4Q8IW00 320 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 CPSF7Q8N684 471 aaKnown RBP8.73□□□□□ -1.01
PACS1-214ENST00000533811 HORMAD2Q8N7B1 307 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 FAM71DQ8N9W8 422 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 OR52K1Q8NGK4 314 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 OR4L1Q8NH43 312 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 ASB5Q8WWX0 329 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 TRIM44Q96DX7 344 aaPredicted RBP8.73□□□□□ -1.01
PACS1-214ENST00000533811 CYTH2Q99418 400 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 DNAJC7Q99615 494 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 NPAS2Q99743 824 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 TREX2Q9BQ50 279 aaPredicted RBP8.73□□□□□ -1.01
PACS1-214ENST00000533811 PLCD4Q9BRC7 762 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 TRIM51Q9BSJ1 452 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 OSBPL8Q9BZF1 889 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 SYNPO2LQ9H987 977 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 KCNJ16Q9NPI9 418 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 NPDC1Q9NQX5 325 aaPredicted RBP8.73□□□□□ -1.01
PACS1-214ENST00000533811 CCM2LQ9NUG4 571 aaPredicted RBP8.73□□□□□ -1.01
PACS1-214ENST00000533811 HCN3Q9P1Z3 774 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 LRFN1Q9P244 771 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 ANAPC5Q9UJX4 755 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 KLK4Q9Y5K2 254 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 MRFAP1Q9Y605 127 aa8.73□□□□□ -1.01
PACS1-214ENST00000533811 PHF3Q92576 2039 aaKnown RBP8.73□□□□□ -1.01
PACS1-214ENST00000533811 NIPBLQ6KC79 2804 aaeCLIP8.72□□□□□ -1.01
PACS1-214ENST00000533811 ZNF407Q9C0G0 2248 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 USP27XA6NNY8 438 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 PRMT5O14744 637 aaPredicted RBP8.72□□□□□ -1.01
PACS1-214ENST00000533811 SLC25A12O75746 678 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 PTGS2P35354 604 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 RFC3P40938 356 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 CCNFP41002 786 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 EMP3P54852 163 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 FOLH1Q04609 750 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 FOXD4Q12950 439 aaPredicted RBP8.72□□□□□ -1.01
PACS1-214ENST00000533811 EXT1Q16394 746 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 RNFT1Q5M7Z0 435 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 TSTD2Q5T7W7 516 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 AADACL2Q6P093 401 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 PAPD4Q6PIY7 484 aaKnown RBP8.72□□□□□ -1.01
PACS1-214ENST00000533811 PPP1R21Q6ZMI0 780 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 OTOAQ7RTW8 1153 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 FGD2Q7Z6J4 655 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 ANKRD37Q7Z713 158 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 PAQR7Q86WK9 346 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 PLD3Q8IV08 490 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 CCDC71Q8IV32 467 aaPredicted RBP8.72□□□□□ -1.01
PACS1-214ENST00000533811 CHERPQ8IWX8 916 aaKnown RBP8.72□□□□□ -1.01
PACS1-214ENST00000533811 DMRTC2Q8IXT2 367 aaPredicted RBP8.72□□□□□ -1.01
PACS1-214ENST00000533811 SHISA5Q8N114 240 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 MARVELD2Q8N4S9 558 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 SLC5A8Q8N695 610 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 OTUD6BQ8N6M0 293 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 OR13J1Q8NGT2 312 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 OR9A4Q8NGU2 314 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 HMGCLL1Q8TB92 370 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 MAGEC3Q8TD91 643 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 FAM136AQ96C01 138 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 PANX3Q96QZ0 392 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 RBCK1Q9BYM8 510 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 CDCP1Q9H5V8 836 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 ABHD10Q9NUJ1 306 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 SPATA7Q9P0W8 599 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 TAC3Q9UHF0 121 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 INTUQ9ULD6 942 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 RNF6Q9Y252 685 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 ASB1Q9Y576 335 aa8.72□□□□□ -1.01
PACS1-214ENST00000533811 A0A1B0GTH9 108 aa8.71□□□□□ -1.02
PACS1-214ENST00000533811 FAM221AA4D161 298 aa8.71□□□□□ -1.02
PACS1-214ENST00000533811 SOWAHDA6NJG2 315 aa8.71□□□□□ -1.02
PACS1-214ENST00000533811 TMEM200CA6NKL6 621 aa8.71□□□□□ -1.02
PACS1-214ENST00000533811 TXNDC9O14530 226 aa8.71□□□□□ -1.02
PACS1-214ENST00000533811 NDC80O14777 642 aa8.71□□□□□ -1.02
PACS1-214ENST00000533811 PSMD3O43242 534 aa8.71□□□□□ -1.02
PACS1-214ENST00000533811 PHF2O75151 1096 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms