RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 EPS8Q12929 822 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 CHIT1Q13231 466 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 SIM2Q14190 667 aaPredicted RBP9.35□□□□□ -0.91
CHKA-207ENST00000533728 ELAVL3Q14576 367 aaKnown RBP9.35□□□□□ -0.91
CHKA-207ENST00000533728 PTGR1Q14914 329 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 ACOX1Q15067 660 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 CPSF6Q16630 551 aaKnown RBP eCLIP9.35□□□□□ -0.91
CHKA-207ENST00000533728 ZXDCQ2QGD7 858 aaPredicted RBP9.35□□□□□ -0.91
CHKA-207ENST00000533728 GAB4Q2WGN9 574 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 KCTD21Q4G0X4 260 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 SYTL3Q4VX76 610 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 SPANXN4Q5MJ08 99 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 SUSD1Q6UWL2 747 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 SERPINA13PQ6UXR4 307 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 TMC5Q6UXY8 1006 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 MBOAT1Q6ZNC8 495 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 CAMKMTQ7Z624 323 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 AMIGO2Q86SJ2 522 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 MICU2Q8IYU8 434 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 EID3Q8N140 333 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 RASGEF1AQ8N9B8 481 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 OR2T12Q8NG77 320 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 OR8J2Q8NGG1 315 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 ZFP28Q8NHY6 868 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 WDR20Q8TBZ3 569 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 SMARCD2Q92925 531 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 SCAMP4Q969E2 229 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 TBC1D20Q96BZ9 403 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 CXorf40BQ96DE9 158 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 PPM1MQ96MI6 270 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 TMEM74Q96NL1 305 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 OR52E6Q96RD3 313 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 TSC22D3Q99576 134 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 SLC29A1Q99808 456 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 CPPED1Q9BRF8 314 aaPredicted RBP9.35□□□□□ -0.91
CHKA-207ENST00000533728 TRPM6Q9BX84 2022 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 HDAC8Q9BY41 377 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 PAIP1Q9H074 479 aaKnown RBP9.35□□□□□ -0.91
CHKA-207ENST00000533728 SEMA6AQ9H2E6 1030 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 DPEP2Q9H4A9 486 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 EHD1Q9H4M9 534 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 RPF2Q9H7B2 306 aaKnown RBP9.35□□□□□ -0.91
CHKA-207ENST00000533728 PIDD1Q9HB75 910 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 ITM2CQ9NQX7 267 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 FARSBQ9NSD9 589 aaKnown RBP9.35□□□□□ -0.91
CHKA-207ENST00000533728 FAM120CQ9NX05 1096 aaKnown RBP9.35□□□□□ -0.91
CHKA-207ENST00000533728 GDE1Q9NZC3 331 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 VAPAQ9P0L0 249 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 SLAMF8Q9P0V8 285 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 STOX2Q9P2F5 926 aaPredicted RBP9.35□□□□□ -0.91
CHKA-207ENST00000533728 DEC1Q9P2X7 70 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 TSR3Q9UJK0 312 aaKnown RBP9.35□□□□□ -0.91
CHKA-207ENST00000533728 SLC22A14Q9Y267 594 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 PCDHGA11Q9Y5H2 935 aa9.35□□□□□ -0.91
CHKA-207ENST00000533728 NUMA1Q14980 2115 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 ELOVL7A1L3X0 281 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 C1QTNF3-AMACRE9PGA6 284 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 H3BNH8 94 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 SOCS2O14508 198 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 NPC1O15118 1278 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 ACOX3O15254 700 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 DFNA5O60443 496 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 RECQL5O94762 991 aaPredicted RBP9.34□□□□□ -0.91
CHKA-207ENST00000533728 MYO1DO94832 1006 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 WISP1O95388 367 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 H6PDO95479 791 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 SDC1P18827 310 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 PPIBP23284 216 aaKnown RBP9.34□□□□□ -0.91
CHKA-207ENST00000533728 TEAD1P28347 426 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 OXTRP30559 389 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 HALP42357 657 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 GZMMP51124 257 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 DGKQP52824 942 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 SEMG2Q02383 582 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 RPA4Q13156 261 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 BIRC2Q13490 618 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 LAPTM5Q13571 262 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 GTF2H3Q13889 308 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 PLA2G4EQ3MJ16 856 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 COLEC12Q5KU26 742 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 C6orf52Q5T4I8 152 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 C9orf64Q5T6V5 341 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 RNF220Q5VTB9 566 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 FOXB2Q5VYV0 432 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 NOXRED1Q6NXP6 359 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 ERICH5Q6P6B1 374 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 AGTRAPQ6RW13 159 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 UNC5DQ6UXZ4 953 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 DET1Q7L5Y6 550 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 THOC6Q86W42 341 aaKnown RBP9.34□□□□□ -0.91
CHKA-207ENST00000533728 IFNEQ86WN2 208 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 EPHX4Q8IUS5 362 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 SVOPLQ8N434 492 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 DTWD1Q8N5C7 304 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 NAT16Q8N8M0 369 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 LSM14AQ8ND56 463 aaKnown RBP9.34□□□□□ -0.91
CHKA-207ENST00000533728 ITFG1Q8TB96 612 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 ADAMTS16Q8TE57 1224 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 NXPE3Q969Y0 559 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 DGCR14Q96DF8 476 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms