RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 ARF3P61204 181 aaPredicted RBP20.04■□□□□ 0.8
VPS51-211ENST00000533487 YBX1P67809 324 aaKnown RBP20.04■□□□□ 0.8
VPS51-211ENST00000533487 PCDH1Q08174 1060 aa20.04■□□□□ 0.8
VPS51-211ENST00000533487 GPS2Q13227 327 aa20.04■□□□□ 0.8
VPS51-211ENST00000533487 TGIF1Q15583 401 aa20.04■□□□□ 0.8
VPS51-211ENST00000533487 MUM1Q2TAK8 710 aa20.04■□□□□ 0.8
VPS51-211ENST00000533487 PRTGQ2VWP7 1150 aa20.04■□□□□ 0.8
VPS51-211ENST00000533487 PRMT9Q6P2P2 845 aa20.04■□□□□ 0.8
VPS51-211ENST00000533487 NXPE4Q6UWF7 544 aa20.04■□□□□ 0.8
VPS51-211ENST00000533487 CAMKVQ8NCB2 501 aa20.04■□□□□ 0.8
VPS51-211ENST00000533487 SLC45A3Q96JT2 553 aa20.04■□□□□ 0.8
VPS51-211ENST00000533487 TMEM79Q9BSE2 394 aa20.04■□□□□ 0.8
VPS51-211ENST00000533487 MRPL46Q9H2W6 279 aaKnown RBP20.04■□□□□ 0.8
VPS51-211ENST00000533487 DCDC2Q9UHG0 476 aa20.04■□□□□ 0.8
VPS51-211ENST00000533487 A0A1B0GX78 115 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 HYKKA2RU49 373 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 C9J4A7 227 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 HAT1O14929 419 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 CLGNO14967 610 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 DSCR3O14972 297 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 SHBGP04278 402 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 GFAPP14136 432 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 GLRBP48167 497 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 DCDP81605 110 aaKnown RBP20.03■□□□□ 0.8
VPS51-211ENST00000533487 VAC14Q08AM6 782 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 IFFO1Q0D2I5 559 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 SETDB1Q15047 1291 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 PDK4Q16654 411 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 NDUFA9Q16795 377 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 ZNF385CQ66K41 422 aaPredicted RBP20.03■□□□□ 0.8
VPS51-211ENST00000533487 ATG9BQ674R7 924 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 FRMPD2BQ6IN97 320 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 CROCCP2Q86T23 111 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 PLD6Q8N2A8 252 aaKnown RBP20.03■□□□□ 0.8
VPS51-211ENST00000533487 MFSD9Q8NBP5 474 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 SLC38A9Q8NBW4 561 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 TTLQ8NG68 377 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 MZB1Q8WU39 189 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 MR1Q95460 341 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 GBP5Q96PP8 586 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 TMEM109Q9BVC6 243 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 NT5DC2Q9H857 520 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 CUTCQ9NTM9 273 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 COPG2Q9UBF2 871 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 CDC14AQ9UNH5 594 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 PCDHGA4Q9Y5G9 962 aa20.03■□□□□ 0.8
VPS51-211ENST00000533487 STX16-NPEPL1H3BU86 382 aa20.02■□□□□ 0.8
VPS51-211ENST00000533487 K7ENP7 123 aa20.02■□□□□ 0.8
VPS51-211ENST00000533487 K7EPI3 171 aa20.02■□□□□ 0.8
VPS51-211ENST00000533487 UBXN8O00124 270 aa20.02■□□□□ 0.8
VPS51-211ENST00000533487 STX16O14662 325 aa20.02■□□□□ 0.8
VPS51-211ENST00000533487 PRPF4O43172 522 aaKnown RBP eCLIP20.02■□□□□ 0.8
VPS51-211ENST00000533487 SMIM24O75264 130 aa20.02■□□□□ 0.8
VPS51-211ENST00000533487 KRT15P19012 456 aa20.02■□□□□ 0.8
VPS51-211ENST00000533487 ITPKBP27987 946 aa20.02■□□□□ 0.8
VPS51-211ENST00000533487 HSPA7P48741 367 aa20.02■□□□□ 0.8
VPS51-211ENST00000533487 RPS15P62841 145 aaKnown RBP20.02■□□□□ 0.8
VPS51-211ENST00000533487 LAPTM5Q13571 262 aa20.02■□□□□ 0.8
VPS51-211ENST00000533487 PWP1Q13610 501 aa20.02■□□□□ 0.8
VPS51-211ENST00000533487 FAM53BQ14153 422 aa20.02■□□□□ 0.8
VPS51-211ENST00000533487 NAA30Q147X3 362 aaPredicted RBP20.02■□□□□ 0.8
VPS51-211ENST00000533487 PCBP2Q15366 365 aaKnown RBP eCLIP20.02■□□□□ 0.8
VPS51-211ENST00000533487 TBCCQ15814 346 aa20.02■□□□□ 0.8
VPS51-211ENST00000533487 NIPAL1Q6NVV3 410 aa20.02■□□□□ 0.8
VPS51-211ENST00000533487 INO80CQ6PI98 192 aaPredicted RBP20.02■□□□□ 0.8
VPS51-211ENST00000533487 KRT78Q8N1N4 520 aa20.02■□□□□ 0.8
VPS51-211ENST00000533487 CSNK1A1LQ8N752 337 aa20.02■□□□□ 0.8
VPS51-211ENST00000533487 WDR34Q96EX3 536 aa20.02■□□□□ 0.8
VPS51-211ENST00000533487 EFCAB11Q9BUY7 163 aa20.02■□□□□ 0.8
VPS51-211ENST00000533487 OPTCQ9UBM4 332 aa20.02■□□□□ 0.8
VPS51-211ENST00000533487 TBK1Q9UHD2 729 aa20.02■□□□□ 0.8
VPS51-211ENST00000533487 EPG5Q9HCE0 2579 aa20.01■□□□□ 0.79
VPS51-211ENST00000533487 LOC105369274A0A096LPK9 316 aa20.01■□□□□ 0.79
VPS51-211ENST00000533487 LOC102723532A0A0G2JNH3 316 aa20.01■□□□□ 0.79
VPS51-211ENST00000533487 LOC101059948A0A1B0GTJ6 334 aa20.01■□□□□ 0.79
VPS51-211ENST00000533487 ZNF891A8MT65 544 aaPredicted RBP20.01■□□□□ 0.79
VPS51-211ENST00000533487 TERTO14746 1132 aaKnown RBP20.01■□□□□ 0.79
VPS51-211ENST00000533487 KATNA1O75449 491 aa20.01■□□□□ 0.79
VPS51-211ENST00000533487 SLC35G6P0C7Q6 338 aa20.01■□□□□ 0.79
VPS51-211ENST00000533487 C1GALT1C1LP0DN25 315 aa20.01■□□□□ 0.79
VPS51-211ENST00000533487 LIFP15018 202 aa20.01■□□□□ 0.79
VPS51-211ENST00000533487 EPB42P16452 691 aa20.01■□□□□ 0.79
VPS51-211ENST00000533487 TCN2P20062 427 aa20.01■□□□□ 0.79
VPS51-211ENST00000533487 HPDP32754 393 aaPredicted RBP20.01■□□□□ 0.79
VPS51-211ENST00000533487 DLSTP36957 453 aa20.01■□□□□ 0.79
VPS51-211ENST00000533487 CASP2P42575 452 aa20.01■□□□□ 0.79
VPS51-211ENST00000533487 CCT5P48643 541 aa20.01■□□□□ 0.79
VPS51-211ENST00000533487 SKP1P63208 163 aa20.01■□□□□ 0.79
VPS51-211ENST00000533487 REEP5Q00765 189 aa20.01■□□□□ 0.79
VPS51-211ENST00000533487 DNASE1L3Q13609 305 aa20.01■□□□□ 0.79
VPS51-211ENST00000533487 E2F2Q14209 437 aa20.01■□□□□ 0.79
VPS51-211ENST00000533487 PAGE2BQ5JRK9 111 aa20.01■□□□□ 0.79
VPS51-211ENST00000533487 SLCO4C1Q6ZQN7 724 aa20.01■□□□□ 0.79
VPS51-211ENST00000533487 OR4N4Q8N0Y3 316 aa20.01■□□□□ 0.79
VPS51-211ENST00000533487 TRPV3Q8NET8 790 aa20.01■□□□□ 0.79
VPS51-211ENST00000533487 EXT2Q93063 718 aa20.01■□□□□ 0.79
VPS51-211ENST00000533487 FKBP10Q96AY3 582 aa20.01■□□□□ 0.79
VPS51-211ENST00000533487 TM4SF19Q96DZ7 209 aa20.01■□□□□ 0.79
VPS51-211ENST00000533487 SCYL1Q96KG9 808 aa20.01■□□□□ 0.79
VPS51-211ENST00000533487 XPR1Q9UBH6 696 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms