RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 PRSS58Q8IYP2 241 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 APCDD1Q8J025 514 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 KHSRPQ92945 711 aaKnown RBP eCLIP11.89□□□□□ -0.51
BDNF-218ENST00000533246 CREBZFQ9NS37 354 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 ZCCHC3Q9NUD5 404 aaKnown RBP11.89□□□□□ -0.51
BDNF-218ENST00000533246 ARMC1Q9NVT9 282 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 HTRA2O43464 458 aaPredicted RBP11.89□□□□□ -0.51
BDNF-218ENST00000533246 DYRK3O43781 588 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 TULP3O75386 442 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 PAPSS2O95340 614 aaPredicted RBP11.89□□□□□ -0.51
BDNF-218ENST00000533246 NFATC2Q13469 925 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 TYSND1Q2T9J0 566 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 HMGN2P46Q86SG4 172 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 GLB1L3Q8NCI6 653 aaPredicted RBP11.89□□□□□ -0.51
BDNF-218ENST00000533246 C2orf15Q8WU43 125 aaKnown RBP11.89□□□□□ -0.51
BDNF-218ENST00000533246 S100ZQ8WXG8 99 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 PTERQ96BW5 349 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 KCNC2Q96PR1 638 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 EDARQ9UNE0 448 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 SLC27A6Q9Y2P4 619 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 A0A1W2PRB8 838 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 GLOD5A6NK44 160 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 SLC22A2O15244 555 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 UGT2B17O75795 530 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 IDSP22304 550 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 CLCNKAP51800 687 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 EEFSECP57772 596 aaKnown RBP11.89□□□□□ -0.51
BDNF-218ENST00000533246 ELP6Q0PNE2 266 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 AKIRIN2Q53H80 203 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 HLA-DQA1Q5Y7H0 255 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 AGTRAPQ6RW13 159 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 KLHL17Q6TDP4 642 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 CYS1Q717R9 158 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 ERMP1Q7Z2K6 904 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 AMZ2Q86W34 360 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 AHI1Q8N157 1196 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 NXPE1Q8N323 547 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 LSMEM1Q8N8F7 131 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 FAR1Q8WVX9 515 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 ZNF285Q96NJ3 590 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 MUS81Q96NY9 551 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 SPRTNQ9H040 489 aaPredicted RBP11.89□□□□□ -0.51
BDNF-218ENST00000533246 DPEP2Q9H4A9 486 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 KCNN3Q9UGI6 736 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 FZD4Q9ULV1 537 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 BAIAP2Q9UQB8 552 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 GSTK1Q9Y2Q3 226 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 ZNF451Q9Y4E5 1061 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 TIAM2Q8IVF5 1701 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 FGF18O76093 207 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 HLA-DQA2P01906 255 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 ATP1B2P14415 290 aaPredicted RBP11.89□□□□□ -0.51
BDNF-218ENST00000533246 OR1E2P47887 323 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 CREMQ03060 361 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 SRSF11Q05519 484 aaKnown RBP11.89□□□□□ -0.51
BDNF-218ENST00000533246 TAB1Q15750 504 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 RNASE12Q5GAN4 147 aaKnown RBP11.89□□□□□ -0.51
BDNF-218ENST00000533246 CLLU1OSQ5K130 101 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 BHLHB9Q6PI77 547 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 SMARCD3Q6STE5 483 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.89□□□□□ -0.51
BDNF-218ENST00000533246 LUZP2Q86TE4 346 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 P2RY8Q86VZ1 359 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 DCAF4L2Q8NA75 395 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 AHCYL2Q96HN2 611 aaKnown RBP11.89□□□□□ -0.51
BDNF-218ENST00000533246 COL21A1Q96P44 957 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 COPS4Q9BT78 406 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 MKRN2Q9H000 416 aaKnown RBP11.89□□□□□ -0.51
BDNF-218ENST00000533246 NLE1Q9NVX2 485 aaPredicted RBP11.89□□□□□ -0.51
BDNF-218ENST00000533246 PAQR5Q9NXK6 330 aaPredicted RBP11.89□□□□□ -0.51
BDNF-218ENST00000533246 MLXQ9UH92 298 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 CORO2BQ9UQ03 480 aa11.89□□□□□ -0.51
BDNF-218ENST00000533246 C4AP0C0L4 1744 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 TCRBV5S1A1TA0A578 114 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 MANBAO00462 879 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 NFATC1O95644 943 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 ZNF8P17098 575 aaPredicted RBP11.88□□□□□ -0.51
BDNF-218ENST00000533246 MAGEA11P43364 429 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 OR4D2P58180 307 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 POU6F2P78424 691 aaPredicted RBP11.88□□□□□ -0.51
BDNF-218ENST00000533246 PCDH1Q08174 1060 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 ZNF730Q6ZMV8 503 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 ARHGAP12Q8IWW6 846 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 C7orf61Q8IZ16 206 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 CPA6Q8N4T0 437 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 NCSTNQ92542 709 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 LMLNQ96KR4 655 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 SLX1AQ9BQ83 275 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 CLEC4MQ9H2X3 399 aaPredicted RBP11.88□□□□□ -0.51
BDNF-218ENST00000533246 TVP23BQ9NYZ1 205 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 KLHL42Q9P2K6 505 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 RHCGQ9UBD6 479 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 DHRS7Q9Y394 339 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 EVPLQ92817 2033 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 XPNPEP2O43895 674 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 UGT2B11O75310 529 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 SNX4O95219 450 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 PRG2P13727 222 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 PRPS1L1P21108 318 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms