RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 CSNK1G2P78368 415 aa14.65□□□□□ -0.06
CPSF1-210ENST00000532935 CDKL1Q00532 357 aa14.65□□□□□ -0.06
CPSF1-210ENST00000532935 CHAF1BQ13112 559 aa14.65□□□□□ -0.06
CPSF1-210ENST00000532935 TSNQ15631 228 aaKnown RBP14.65□□□□□ -0.06
CPSF1-210ENST00000532935 ZKSCAN8Q15776 578 aaPredicted RBP14.65□□□□□ -0.06
CPSF1-210ENST00000532935 PRMT9Q6P2P2 845 aa14.65□□□□□ -0.06
CPSF1-210ENST00000532935 CEP128Q6ZU80 1094 aa14.65□□□□□ -0.06
CPSF1-210ENST00000532935 FRA10AC1Q70Z53 315 aa14.65□□□□□ -0.06
CPSF1-210ENST00000532935 CEP112Q8N8E3 955 aa14.65□□□□□ -0.06
CPSF1-210ENST00000532935 IFT81Q8WYA0 676 aa14.65□□□□□ -0.06
CPSF1-210ENST00000532935 PTERQ96BW5 349 aa14.65□□□□□ -0.06
CPSF1-210ENST00000532935 OR4K3Q96R72 315 aa14.65□□□□□ -0.06
CPSF1-210ENST00000532935 ING2Q9H160 280 aa14.65□□□□□ -0.06
CPSF1-210ENST00000532935 SLC26A1Q9H2B4 701 aa14.65□□□□□ -0.06
CPSF1-210ENST00000532935 WDR54Q9H977 334 aa14.65□□□□□ -0.06
CPSF1-210ENST00000532935 ZNF304Q9HCX3 659 aa14.65□□□□□ -0.06
CPSF1-210ENST00000532935 TLK1Q9UKI8 766 aa14.65□□□□□ -0.06
CPSF1-210ENST00000532935 MAU2Q9Y6X3 613 aa14.65□□□□□ -0.06
CPSF1-210ENST00000532935 SPENQ96T58 3664 aaKnown RBP14.64□□□□□ -0.07
CPSF1-210ENST00000532935 KCNE1BA0A087WTH5 132 aa14.64□□□□□ -0.07
CPSF1-210ENST00000532935 MKRN2OSH3BPM6 223 aa14.64□□□□□ -0.07
CPSF1-210ENST00000532935 CTIFO43310 598 aaKnown RBP14.64□□□□□ -0.07
CPSF1-210ENST00000532935 DNAJB5O75953 348 aa14.64□□□□□ -0.07
CPSF1-210ENST00000532935 UMODP07911 640 aa14.64□□□□□ -0.07
CPSF1-210ENST00000532935 ANXA5P08758 320 aa14.64□□□□□ -0.07
CPSF1-210ENST00000532935 RAB10P61026 200 aa14.64□□□□□ -0.07
CPSF1-210ENST00000532935 ATP1A4Q13733 1029 aa14.64□□□□□ -0.07
CPSF1-210ENST00000532935 SLMAPQ14BN4 828 aa14.64□□□□□ -0.07
CPSF1-210ENST00000532935 NKG7Q16617 165 aa14.64□□□□□ -0.07
CPSF1-210ENST00000532935 GARNL3Q5VVW2 1013 aa14.64□□□□□ -0.07
CPSF1-210ENST00000532935 MRGPREQ86SM8 312 aa14.64□□□□□ -0.07
CPSF1-210ENST00000532935 ZNF605Q86T29 641 aa14.64□□□□□ -0.07
CPSF1-210ENST00000532935 RELL1Q8IUW5 271 aa14.64□□□□□ -0.07
CPSF1-210ENST00000532935 TMEM151BQ8IW70 566 aa14.64□□□□□ -0.07
CPSF1-210ENST00000532935 SPATA6LQ8N4H0 392 aa14.64□□□□□ -0.07
CPSF1-210ENST00000532935 ARHGEF39Q8N4T4 335 aa14.64□□□□□ -0.07
CPSF1-210ENST00000532935 ABHD11Q8NFV4 315 aa14.64□□□□□ -0.07
CPSF1-210ENST00000532935 COL26A1Q96A83 441 aa14.64□□□□□ -0.07
CPSF1-210ENST00000532935 THAP11Q96EK4 314 aa14.64□□□□□ -0.07
CPSF1-210ENST00000532935 MVB12AQ96EY5 273 aa14.64□□□□□ -0.07
CPSF1-210ENST00000532935 IP6K3Q96PC2 410 aa14.64□□□□□ -0.07
CPSF1-210ENST00000532935 FMO2Q99518 471 aa14.64□□□□□ -0.07
CPSF1-210ENST00000532935 UNKQ9C0B0 810 aaKnown RBP14.64□□□□□ -0.07
CPSF1-210ENST00000532935 TSPYL1Q9H0U9 437 aa14.64□□□□□ -0.07
CPSF1-210ENST00000532935 ZNF71Q9NQZ8 489 aaPredicted RBP14.64□□□□□ -0.07
CPSF1-210ENST00000532935 ACSS2Q9NR19 701 aa14.64□□□□□ -0.07
CPSF1-210ENST00000532935 NINJ2Q9NZG7 142 aa14.64□□□□□ -0.07
CPSF1-210ENST00000532935 CTSFQ9UBX1 484 aa14.64□□□□□ -0.07
CPSF1-210ENST00000532935 CDC14AQ9UNH5 594 aa14.64□□□□□ -0.07
CPSF1-210ENST00000532935 HELZ2Q9BYK8 2649 aaKnown RBP14.64□□□□□ -0.07
CPSF1-210ENST00000532935 DOCK10Q96BY6 2186 aa14.63□□□□□ -0.07
CPSF1-210ENST00000532935 FEZF1A0PJY2 475 aa14.63□□□□□ -0.07
CPSF1-210ENST00000532935 STATHP02808 62 aa14.63□□□□□ -0.07
CPSF1-210ENST00000532935 FBLP22087 321 aaKnown RBP14.63□□□□□ -0.07
CPSF1-210ENST00000532935 ECHS1P30084 290 aa14.63□□□□□ -0.07
CPSF1-210ENST00000532935 PHBP35232 272 aa14.63□□□□□ -0.07
CPSF1-210ENST00000532935 GRK3P35626 688 aa14.63□□□□□ -0.07
CPSF1-210ENST00000532935 BCL6P41182 706 aa14.63□□□□□ -0.07
CPSF1-210ENST00000532935 HNMTP50135 292 aa14.63□□□□□ -0.07
CPSF1-210ENST00000532935 CCR8P51685 355 aa14.63□□□□□ -0.07
CPSF1-210ENST00000532935 LACTB2Q53H82 288 aaPredicted RBP14.63□□□□□ -0.07
CPSF1-210ENST00000532935 UBAP2Q5T6F2 1119 aaKnown RBP14.63□□□□□ -0.07
CPSF1-210ENST00000532935 MED25Q71SY5 747 aa14.63□□□□□ -0.07
CPSF1-210ENST00000532935 VN1R4Q7Z5H5 301 aa14.63□□□□□ -0.07
CPSF1-210ENST00000532935 PPP1R32Q7Z5V6 425 aa14.63□□□□□ -0.07
CPSF1-210ENST00000532935 THOC6Q86W42 341 aaKnown RBP14.63□□□□□ -0.07
CPSF1-210ENST00000532935 OR4K1Q8NGD4 311 aa14.63□□□□□ -0.07
CPSF1-210ENST00000532935 UBXN10Q96LJ8 280 aa14.63□□□□□ -0.07
CPSF1-210ENST00000532935 SPSB2Q99619 263 aa14.63□□□□□ -0.07
CPSF1-210ENST00000532935 EGFL8Q99944 293 aa14.63□□□□□ -0.07
CPSF1-210ENST00000532935 NXT1Q9UKK6 140 aaKnown RBP14.63□□□□□ -0.07
CPSF1-210ENST00000532935 TP53TG5Q9Y2B4 290 aa14.63□□□□□ -0.07
CPSF1-210ENST00000532935 HEMK1Q9Y5R4 338 aaPredicted RBP14.63□□□□□ -0.07
CPSF1-210ENST00000532935 VSTM2BA6NLU5 285 aa14.62□□□□□ -0.07
CPSF1-210ENST00000532935 DYNC1I1O14576 645 aa14.62□□□□□ -0.07
CPSF1-210ENST00000532935 LCMT2O60294 686 aaKnown RBP14.62□□□□□ -0.07
CPSF1-210ENST00000532935 CD1DP15813 335 aa14.62□□□□□ -0.07
CPSF1-210ENST00000532935 CCL11P51671 97 aa14.62□□□□□ -0.07
CPSF1-210ENST00000532935 RRADP55042 308 aa14.62□□□□□ -0.07
CPSF1-210ENST00000532935 ATP6V0D1P61421 351 aa14.62□□□□□ -0.07
CPSF1-210ENST00000532935 DSG2Q14126 1118 aa14.62□□□□□ -0.07
CPSF1-210ENST00000532935 FAM53BQ14153 422 aa14.62□□□□□ -0.07
CPSF1-210ENST00000532935 CSHL1Q14406 222 aa14.62□□□□□ -0.07
CPSF1-210ENST00000532935 TGFBIQ15582 683 aa14.62□□□□□ -0.07
CPSF1-210ENST00000532935 NDUFA9Q16795 377 aa14.62□□□□□ -0.07
CPSF1-210ENST00000532935 SHISA6Q6ZSJ9 500 aa14.62□□□□□ -0.07
CPSF1-210ENST00000532935 RAPH1Q70E73 1250 aa14.62□□□□□ -0.07
CPSF1-210ENST00000532935 CMC1Q7Z7K0 106 aa14.62□□□□□ -0.07
CPSF1-210ENST00000532935 PTRH1Q86Y79 214 aaKnown RBP14.62□□□□□ -0.07
CPSF1-210ENST00000532935 TMEM102Q8N9M5 508 aaPredicted RBP14.62□□□□□ -0.07
CPSF1-210ENST00000532935 SLC5A11Q8WWX8 675 aa14.62□□□□□ -0.07
CPSF1-210ENST00000532935 NEIL2Q969S2 332 aa14.62□□□□□ -0.07
CPSF1-210ENST00000532935 RHBDF1Q96CC6 855 aa14.62□□□□□ -0.07
CPSF1-210ENST00000532935 TM4SF19Q96DZ7 209 aa14.62□□□□□ -0.07
CPSF1-210ENST00000532935 MRRFQ96E11 262 aaKnown RBP14.62□□□□□ -0.07
CPSF1-210ENST00000532935 TSNARE1Q96NA8 513 aa14.62□□□□□ -0.07
CPSF1-210ENST00000532935 CYTH2Q99418 400 aa14.62□□□□□ -0.07
CPSF1-210ENST00000532935 DRC3Q9H069 523 aa14.62□□□□□ -0.07
CPSF1-210ENST00000532935 CDC42EP4Q9H3Q1 356 aaKnown RBP14.62□□□□□ -0.07
CPSF1-210ENST00000532935 SOX17Q9H6I2 414 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms