RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 KIF18AQ8NI77 898 aa16.92■□□□□ 0.3
SMG1-203ENST00000532700 PNPLA2Q96AD5 504 aa16.92■□□□□ 0.3
SMG1-203ENST00000532700 ALKBH8Q96BT7 664 aaKnown RBP16.92■□□□□ 0.3
SMG1-203ENST00000532700 PYCR2Q96C36 320 aa16.92■□□□□ 0.3
SMG1-203ENST00000532700 SNF8Q96H20 258 aa16.92■□□□□ 0.3
SMG1-203ENST00000532700 OR4K3Q96R72 315 aa16.92■□□□□ 0.3
SMG1-203ENST00000532700 SPNS1Q9H2V7 528 aa16.92■□□□□ 0.3
SMG1-203ENST00000532700 PPANQ9NQ55 473 aaKnown RBP16.92■□□□□ 0.3
SMG1-203ENST00000532700 CCDC177Q9NQR7 707 aaPredicted RBP16.92■□□□□ 0.3
SMG1-203ENST00000532700 TAS2R13Q9NYV9 303 aa16.92■□□□□ 0.3
SMG1-203ENST00000532700 SNX24Q9Y343 169 aa16.92■□□□□ 0.3
SMG1-203ENST00000532700 OR2W5A6NFC9 320 aa16.91■□□□□ 0.3
SMG1-203ENST00000532700 CD63P08962 238 aa16.91■□□□□ 0.3
SMG1-203ENST00000532700 PIM1P11309 404 aaPredicted RBP16.91■□□□□ 0.3
SMG1-203ENST00000532700 CDH1P12830 882 aa16.91■□□□□ 0.3
SMG1-203ENST00000532700 HSD17B2P37059 387 aa16.91■□□□□ 0.3
SMG1-203ENST00000532700 SLC26A3P40879 764 aa16.91■□□□□ 0.3
SMG1-203ENST00000532700 ABATP80404 500 aa16.91■□□□□ 0.3
SMG1-203ENST00000532700 MEF2AQ02078 507 aaPredicted RBP16.91■□□□□ 0.3
SMG1-203ENST00000532700 C2orf54Q08AI8 447 aa16.91■□□□□ 0.3
SMG1-203ENST00000532700 PDIA2Q13087 525 aaKnown RBP16.91■□□□□ 0.3
SMG1-203ENST00000532700 NAE1Q13564 534 aa16.91■□□□□ 0.3
SMG1-203ENST00000532700 DSG2Q14126 1118 aa16.91■□□□□ 0.3
SMG1-203ENST00000532700 TUBB8Q3ZCM7 444 aa16.91■□□□□ 0.3
SMG1-203ENST00000532700 CRB2Q5IJ48 1285 aa16.91■□□□□ 0.3
SMG1-203ENST00000532700 ATG9BQ674R7 924 aa16.91■□□□□ 0.3
SMG1-203ENST00000532700 PRMT9Q6P2P2 845 aa16.91■□□□□ 0.3
SMG1-203ENST00000532700 IGFL3Q6UXB1 125 aa16.91■□□□□ 0.3
SMG1-203ENST00000532700 CAPN12Q6ZSI9 719 aa16.91■□□□□ 0.3
SMG1-203ENST00000532700 KIAA0408Q6ZU52 694 aa16.91■□□□□ 0.3
SMG1-203ENST00000532700 GALNT7Q86SF2 657 aa16.91■□□□□ 0.3
SMG1-203ENST00000532700 PDIK1LQ8N165 341 aa16.91■□□□□ 0.3
SMG1-203ENST00000532700 FBXO36Q8NEA4 188 aa16.91■□□□□ 0.3
SMG1-203ENST00000532700 OR9A4Q8NGU2 314 aa16.91■□□□□ 0.3
SMG1-203ENST00000532700 MIEF2Q96C03 454 aa16.91■□□□□ 0.3
SMG1-203ENST00000532700 MMABQ96EY8 250 aaPredicted RBP16.91■□□□□ 0.3
SMG1-203ENST00000532700 SGPP1Q9BX95 441 aa16.91■□□□□ 0.3
SMG1-203ENST00000532700 PARVBQ9HBI1 364 aa16.91■□□□□ 0.3
SMG1-203ENST00000532700 ATP13A2Q9NQ11 1180 aa16.91■□□□□ 0.3
SMG1-203ENST00000532700 TRPC4Q9UBN4 977 aa16.91■□□□□ 0.3
SMG1-203ENST00000532700 ZNF282Q9UDV7 671 aaPredicted RBP16.91■□□□□ 0.3
SMG1-203ENST00000532700 C3orf18Q9UK00 162 aa16.91■□□□□ 0.3
SMG1-203ENST00000532700 USP9XQ93008 2570 aaPredicted RBP16.91■□□□□ 0.3
SMG1-203ENST00000532700 UTP20O75691 2785 aaKnown RBP16.91■□□□□ 0.3
SMG1-203ENST00000532700 TCP11X1B4DZS4 312 aa16.9■□□□□ 0.3
SMG1-203ENST00000532700 E7ESA3 106 aa16.9■□□□□ 0.3
SMG1-203ENST00000532700 KLHL18O94889 574 aa16.9■□□□□ 0.3
SMG1-203ENST00000532700 CCNDBP1O95273 360 aa16.9■□□□□ 0.3
SMG1-203ENST00000532700 C8GP07360 202 aa16.9■□□□□ 0.3
SMG1-203ENST00000532700 COX6A1P12074 109 aa16.9■□□□□ 0.3
SMG1-203ENST00000532700 EMP3P54852 163 aa16.9■□□□□ 0.3
SMG1-203ENST00000532700 EEF1A2Q05639 463 aaKnown RBP16.9■□□□□ 0.3
SMG1-203ENST00000532700 AIMP2Q13155 320 aaKnown RBP16.9■□□□□ 0.3
SMG1-203ENST00000532700 SBSNQ6UWP8 590 aa16.9■□□□□ 0.3
SMG1-203ENST00000532700 PDSS2Q86YH6 399 aa16.9■□□□□ 0.3
SMG1-203ENST00000532700 MYO1HQ8N1T3 1032 aa16.9■□□□□ 0.3
SMG1-203ENST00000532700 KCT2Q8NC54 265 aa16.9■□□□□ 0.3
SMG1-203ENST00000532700 ZNF740Q8NDX6 193 aa16.9■□□□□ 0.3
SMG1-203ENST00000532700 SNRNP40Q96DI7 357 aaKnown RBP16.9■□□□□ 0.3
SMG1-203ENST00000532700 MOCOSQ96EN8 888 aa16.9■□□□□ 0.3
SMG1-203ENST00000532700 ERP44Q9BS26 406 aa16.9■□□□□ 0.3
SMG1-203ENST00000532700 NAT9Q9BTE0 207 aa16.9■□□□□ 0.3
SMG1-203ENST00000532700 MCMBPQ9BTE3 642 aa16.9■□□□□ 0.3
SMG1-203ENST00000532700 DPH5Q9H2P9 285 aa16.9■□□□□ 0.3
SMG1-203ENST00000532700 ZNF160Q9HCG1 818 aa16.9■□□□□ 0.3
SMG1-203ENST00000532700 SEMA3GQ9NS98 782 aa16.9■□□□□ 0.3
SMG1-203ENST00000532700 ASF1BQ9NVP2 202 aa16.9■□□□□ 0.3
SMG1-203ENST00000532700 C5AR2Q9P296 337 aa16.9■□□□□ 0.3
SMG1-203ENST00000532700 NXT1Q9UKK6 140 aaKnown RBP16.9■□□□□ 0.3
SMG1-203ENST00000532700 ZNF839A8K0R7 811 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 IDSB3KWA1 339 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 CDC7O00311 574 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 DNAJB6O75190 326 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 SEMA7AO75326 666 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 B3GALT4O96024 378 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 NPPBP16860 134 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 IL1RNP18510 177 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 GMPRP36959 345 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 ARL4CP56559 192 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 RELAQ04206 551 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 SP140Q13342 867 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 NAA25Q14CX7 972 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 TRADDQ15628 312 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 PPP1R3AQ16821 1122 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 ZC3HC1Q86WB0 502 aaKnown RBP16.89■□□□□ 0.29
SMG1-203ENST00000532700 CEP97Q8IW35 865 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 CISD2Q8N5K1 135 aaKnown RBP16.89■□□□□ 0.29
SMG1-203ENST00000532700 MNS1Q8NEH6 495 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 ZCCHC10Q8TBK6 192 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 MCOLN3Q8TDD5 553 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 ANKRD49Q8WVL7 239 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 PSMF1Q92530 271 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 TM4SF19Q96DZ7 209 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 THOC3Q96J01 351 aaKnown RBP16.89■□□□□ 0.29
SMG1-203ENST00000532700 UNKQ9C0B0 810 aaKnown RBP16.89■□□□□ 0.29
SMG1-203ENST00000532700 DRC3Q9H069 523 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 SLAMF7Q9NQ25 335 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 TMEM184CQ9NVA4 438 aa16.89■□□□□ 0.29
SMG1-203ENST00000532700 UTP6Q9NYH9 597 aaKnown RBP16.89■□□□□ 0.29
SMG1-203ENST00000532700 MOCS1Q9NZB8 636 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms