RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 GRK6P43250 576 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 RPS9P46781 194 aaKnown RBP10.97□□□□□ -0.65
PTPRK-221ENST00000532331 RIPK1Q13546 671 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 NCEH1Q6PIU2 408 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 SUSD1Q6UWL2 747 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 PARP8Q8N3A8 854 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 COX4I2Q96KJ9 171 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 KLF16Q9BXK1 252 aaPredicted RBP10.97□□□□□ -0.65
PTPRK-221ENST00000532331 RAPGEFL1Q9UHV5 662 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 RBM7Q9Y580 266 aaKnown RBP10.97□□□□□ -0.65
PTPRK-221ENST00000532331 CLEC3AO75596 197 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 TCEA3O75764 348 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 PAPSS2O95340 614 aaPredicted RBP10.97□□□□□ -0.65
PTPRK-221ENST00000532331 LDOC1O95751 146 aaPredicted RBP10.97□□□□□ -0.65
PTPRK-221ENST00000532331 KLK1P06870 262 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 CDH12P55289 794 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 FRG2Q64ET8 278 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 CPXM2Q8N436 756 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 FRG2BQ96QU4 278 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 PHF7Q9BWX1 381 aaPredicted RBP10.97□□□□□ -0.65
PTPRK-221ENST00000532331 Q9N2J8 555 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 PRORSD1PA6NEY8 169 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 MATN2O00339 956 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 KCNJ13O60928 360 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 AGR2O95994 175 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 HBQ1P09105 142 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 DECR1Q16698 335 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 NDUFA5Q16718 116 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 C3orf58Q8NDZ4 430 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 DUSP23Q9BVJ7 150 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 PLGRKTQ9HBL7 147 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 ZCCHC3Q9NUD5 404 aaKnown RBP10.97□□□□□ -0.65
PTPRK-221ENST00000532331 OXSMQ9NWU1 459 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 DKKL1Q9UK85 242 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 TCRBV7S3A2A0A539 114 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 SCDO00767 359 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 NME6O75414 186 aaPredicted RBP10.97□□□□□ -0.65
PTPRK-221ENST00000532331 FHP07954 510 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 CDH1P12830 882 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 PCDH1Q08174 1060 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 KCNC3Q14003 757 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 KCNJ11Q14654 390 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.97□□□□□ -0.653e-6■■■■■ 29.3
PTPRK-221ENST00000532331 AMIGO1Q86WK6 493 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 DCP2Q8IU60 420 aaKnown RBP10.97□□□□□ -0.65
PTPRK-221ENST00000532331 RFKQ969G6 155 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 IMP4Q96G21 291 aaKnown RBP10.97□□□□□ -0.65
PTPRK-221ENST00000532331 NSMCE3Q96MG7 304 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 FBRSL1Q9HCM7 1045 aaKnown RBP10.97□□□□□ -0.65
PTPRK-221ENST00000532331 ZDHHC18Q9NUE0 388 aa10.97□□□□□ -0.65
PTPRK-221ENST00000532331 TPD52L2O43399 206 aaKnown RBP10.96□□□□□ -0.65
PTPRK-221ENST00000532331 SSNA1O43805 119 aa10.96□□□□□ -0.65
PTPRK-221ENST00000532331 GLDCP23378 1020 aa10.96□□□□□ -0.65
PTPRK-221ENST00000532331 HNRNPA1L2Q32P51 320 aaKnown RBP10.96□□□□□ -0.65
PTPRK-221ENST00000532331 ZNF311Q5JNZ3 666 aa10.96□□□□□ -0.65
PTPRK-221ENST00000532331 DCAF12L1Q5VU92 463 aa10.96□□□□□ -0.65
PTPRK-221ENST00000532331 Q6ZSR6 202 aa10.96□□□□□ -0.65
PTPRK-221ENST00000532331 OR5M3Q8NGP4 307 aa10.96□□□□□ -0.65
PTPRK-221ENST00000532331 RLN3Q8WXF3 142 aa10.96□□□□□ -0.65
PTPRK-221ENST00000532331 BORCS6Q96GS4 357 aa10.96□□□□□ -0.65
PTPRK-221ENST00000532331 GPATCH1Q9BRR8 931 aaKnown RBP10.96□□□□□ -0.65
PTPRK-221ENST00000532331 UTS2RQ9UKP6 389 aa10.96□□□□□ -0.65
PTPRK-221ENST00000532331 IDH3BO43837 385 aa10.96□□□□□ -0.65
PTPRK-221ENST00000532331 CYP17A1P05093 508 aa10.96□□□□□ -0.65
PTPRK-221ENST00000532331 ALPPP05187 535 aa10.96□□□□□ -0.65
PTPRK-221ENST00000532331 PRKAR1AP10644 381 aa10.96□□□□□ -0.65
PTPRK-221ENST00000532331 CHRM1P11229 460 aaPredicted RBP10.96□□□□□ -0.65
PTPRK-221ENST00000532331 PRPS1L1P21108 318 aa10.96□□□□□ -0.65
PTPRK-221ENST00000532331 ITGA3P26006 1051 aa10.96□□□□□ -0.65
PTPRK-221ENST00000532331 GJA4P35212 333 aa10.96□□□□□ -0.65
PTPRK-221ENST00000532331 GSTM4Q03013 218 aa10.96□□□□□ -0.65
PTPRK-221ENST00000532331 ZNF846Q147U1 533 aa10.96□□□□□ -0.65
PTPRK-221ENST00000532331 TANGO2Q6ICL3 276 aa10.96□□□□□ -0.65
PTPRK-221ENST00000532331 C15orf39Q6ZRI6 1047 aa10.96□□□□□ -0.65
PTPRK-221ENST00000532331 ZZZ3Q8IYH5 903 aa10.96□□□□□ -0.65
PTPRK-221ENST00000532331 CHST14Q8NCH0 376 aa10.96□□□□□ -0.65
PTPRK-221ENST00000532331 SNX33Q8WV41 574 aa10.96□□□□□ -0.65
PTPRK-221ENST00000532331 JPH3Q8WXH2 748 aaPredicted RBP10.96□□□□□ -0.65
PTPRK-221ENST00000532331 PDCD10Q9BUL8 212 aa10.96□□□□□ -0.65
PTPRK-221ENST00000532331 FAM159BA6NKW6 160 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 STX16-NPEPL1H3BU86 382 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 STX16O14662 325 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 NADKO95544 446 aaPredicted RBP10.96□□□□□ -0.66
PTPRK-221ENST00000532331 EFNA1P20827 205 aaPredicted RBP10.96□□□□□ -0.66
PTPRK-221ENST00000532331 AHCYP23526 432 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 TGFBR2P37173 567 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 CRISP3P54108 245 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 DSC1Q08554 894 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 PM20D1Q6GTS8 502 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 GPR65Q8IYL9 337 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 THUMPD1Q9NXG2 353 aaKnown RBP10.96□□□□□ -0.66
PTPRK-221ENST00000532331 TESMINQ9Y4I5 508 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 FAM149AA5PLN7 773 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 FAM155AB1AL88 458 aaPredicted RBP10.96□□□□□ -0.66
PTPRK-221ENST00000532331 ACRV1P26436 265 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 DMWDQ09019 674 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 DSC3Q14574 896 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 PTPRCAPQ14761 206 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 PTCHD3Q3KNS1 767 aa10.96□□□□□ -0.66
PTPRK-221ENST00000532331 ZDHHC21Q8IVQ6 265 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms