RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 ZNF284Q2VY69 593 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 CCDC58Q4VC31 144 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 SPANXN4Q5MJ08 99 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 ZDHHC20Q5W0Z9 365 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 TBC1D21Q8IYX1 336 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 SP7Q8TDD2 431 aaPredicted RBP11.2□□□□□ -0.62
USP35-207ENST00000530546 UBTD2Q8WUN7 234 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 ASB11Q8WXH4 323 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 NTMT1Q9BV86 223 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 SLC12A9Q9BXP2 914 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 ELOVL6Q9H5J4 265 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 TRPS1Q9UHF7 1281 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 NOTCH4Q99466 2003 aa11.2□□□□□ -0.62
USP35-207ENST00000530546 A0A1W2PQ67 120 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 ANKRD28O15084 1053 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 DFNA5O60443 496 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 PTTG1O95997 202 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 ELFN1P0C7U0 828 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 EN2P19622 333 aaPredicted RBP11.19□□□□□ -0.62
USP35-207ENST00000530546 SLC6A11P48066 632 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 CTSCP53634 463 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 ST8SIA6P61647 398 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 VAC14Q08AM6 782 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 ZNF181Q2M3W8 571 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 SYTL3Q4VX76 610 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 PAGE2BQ5JRK9 111 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 CACHD1Q5VU97 1274 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 NEK5Q6P3R8 708 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 SUSD1Q6UWL2 747 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 THAP5Q7Z6K1 395 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 HID1Q8IV36 788 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 RAVER1Q8IY67 606 aaKnown RBP11.19□□□□□ -0.62
USP35-207ENST00000530546 PAPD5Q8NDF8 572 aaKnown RBP11.19□□□□□ -0.62
USP35-207ENST00000530546 HCAR2Q8TDS4 363 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 SMG7Q92540 1137 aaKnown RBP11.19□□□□□ -0.62
USP35-207ENST00000530546 NXPE3Q969Y0 559 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 ZNF707Q96C28 371 aaPredicted RBP11.19□□□□□ -0.62
USP35-207ENST00000530546 MUS81Q96NY9 551 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 ACPTQ9BZG2 426 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 NPAP1Q9NZP6 1156 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.19□□□□□ -0.62
USP35-207ENST00000530546 B4GAT1O43505 415 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 TSPAN6O43657 245 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 TULP3O75386 442 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 UPK1BO75841 260 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 C8GP07360 202 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 UMPSP11172 480 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 NAT2P11245 290 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 ZNF30P17039 623 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 CYP2A7P20853 494 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 ZNF805Q5CZA5 627 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 DLEU7Q6UYE1 221 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 PARS2Q7L3T8 475 aaKnown RBP11.19□□□□□ -0.62
USP35-207ENST00000530546 R3HCC1LQ7Z5L2 792 aaKnown RBP11.19□□□□□ -0.62
USP35-207ENST00000530546 ADCK1Q86TW2 530 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 SLC22A15Q8IZD6 547 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 RHOXF1Q8NHV9 184 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 MCOLN3Q8TDD5 553 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 SLC9A3R1O14745 358 aaPredicted RBP11.19□□□□□ -0.62
USP35-207ENST00000530546 SGTAO43765 313 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 SH3BGRLO75368 114 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 LRATO95237 230 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 NADKO95544 446 aaPredicted RBP11.19□□□□□ -0.62
USP35-207ENST00000530546 EIF2DP41214 584 aaKnown RBP11.19□□□□□ -0.62
USP35-207ENST00000530546 MRPL19P49406 292 aaKnown RBP11.19□□□□□ -0.62
USP35-207ENST00000530546 IST1P53990 364 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 KRR1Q13601 381 aaKnown RBP11.19□□□□□ -0.62
USP35-207ENST00000530546 DDX39BQ13838 428 aaKnown RBP11.19□□□□□ -0.62
USP35-207ENST00000530546 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.19□□□□□ -0.62
USP35-207ENST00000530546 TUBA3EQ6PEY2 450 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 PSRC1Q6PGN9 363 aaPredicted RBP11.19□□□□□ -0.62
USP35-207ENST00000530546 ADGRD2Q7Z7M1 963 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 SFTPA1Q8IWL2 248 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 ZNF557Q8N988 423 aaPredicted RBP11.19□□□□□ -0.62
USP35-207ENST00000530546 OSCP1Q8WVF1 389 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 SLC13A3Q8WWT9 602 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 TRIM63Q969Q1 353 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 AP2M1Q96CW1 435 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 TSSK3Q96PN8 268 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 THUMPD3Q9BV44 507 aaKnown RBP11.19□□□□□ -0.62
USP35-207ENST00000530546 C1orf109Q9NX04 203 aa11.19□□□□□ -0.62
USP35-207ENST00000530546 TAF4O00268 1085 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 ZNF197O14709 1029 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 LDLRP01130 860 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 HNRNPA1P09651 372 aaKnown RBP eCLIP11.18□□□□□ -0.62
USP35-207ENST00000530546 UBL4AP11441 157 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 BCKDHAP12694 445 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 EEFSECP57772 596 aaKnown RBP11.18□□□□□ -0.62
USP35-207ENST00000530546 C19orf57Q0VDD7 668 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 TOP3AQ13472 1001 aaPredicted RBP11.18□□□□□ -0.62
USP35-207ENST00000530546 TSTA3Q13630 321 aaPredicted RBP11.18□□□□□ -0.62
USP35-207ENST00000530546 MAPK11Q15759 364 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 MAPKAPK3Q16644 382 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 GTDC1Q4AE62 458 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 CCSMST1Q4G0I0 132 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 RSBN1Q5VWQ0 802 aaPredicted RBP11.18□□□□□ -0.62
USP35-207ENST00000530546 GLYATQ6IB77 296 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 LYSMD2Q8IV50 215 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 CELF5Q8N6W0 485 aaKnown RBP11.18□□□□□ -0.62
USP35-207ENST00000530546 RASGEF1AQ8N9B8 481 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms