RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 EID2Q8N6I1 236 aa13.87□□□□□ -0.19
TTC39A-216ENST00000530004 ARL10Q8N8L6 244 aa13.87□□□□□ -0.19
TTC39A-216ENST00000530004 SETD7Q8WTS6 366 aaKnown RBP13.87□□□□□ -0.19
TTC39A-216ENST00000530004 ACPTQ9BZG2 426 aa13.87□□□□□ -0.19
TTC39A-216ENST00000530004 SLC40A1Q9NP59 571 aa13.87□□□□□ -0.19
TTC39A-216ENST00000530004 SDR39U1Q9NRG7 319 aaPredicted RBP13.87□□□□□ -0.19
TTC39A-216ENST00000530004 HEBP2Q9Y5Z4 205 aa13.87□□□□□ -0.19
TTC39A-216ENST00000530004 PRAMEF33A0A0G2JMD5 474 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 C4orf47A7E2U8 309 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 H0YIV9 168 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 AIM2O14862 343 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 FLRT2O43155 660 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 SIGLEC6O43699 453 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 GDF9O60383 454 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 ACADVLP49748 655 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 MAZP56270 477 aaKnown RBP13.86□□□□□ -0.19
TTC39A-216ENST00000530004 RPL38P63173 70 aaKnown RBP13.86□□□□□ -0.19
TTC39A-216ENST00000530004 UBE2IP63279 158 aaKnown RBP13.86□□□□□ -0.19
TTC39A-216ENST00000530004 E2F2Q14209 437 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 C14orf28Q4W4Y0 310 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 ATG9BQ674R7 924 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 NXPE4Q6UWF7 544 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 SLC9B2Q86UD5 537 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 SLC35F3Q8IY50 421 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 ARL14Q8N4G2 192 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 FAM181AQ8N9Y4 354 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 KYQ8NBH2 561 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 OR52E1Q8NGJ3 308 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 SMPDL3AQ92484 453 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 MCUR1Q96AQ8 359 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 SH3KBP1Q96B97 665 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 RCN3Q96D15 328 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 CXorf40BQ96DE9 158 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 HAUS8Q9BT25 410 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 ACAT2Q9BWD1 397 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 BRINP2Q9C0B6 783 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 LRTM1Q9HBL6 345 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 POT1Q9NUX5 634 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 CPNE7Q9UBL6 633 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 TAC3Q9UHF0 121 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 BTBD3Q9Y2F9 522 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 POLR3HQ9Y535 204 aaPredicted RBP13.86□□□□□ -0.19
TTC39A-216ENST00000530004 EP300Q09472 2414 aaPredicted RBP13.86□□□□□ -0.19
TTC39A-216ENST00000530004 SERTM1A2A2V5 107 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 VIPP01282 170 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 SNRPB2P08579 225 aaKnown RBP13.86□□□□□ -0.19
TTC39A-216ENST00000530004 C1GALT1C1LP0DN25 315 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 CD59P13987 128 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 ITGAXP20702 1163 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 GRK6P43250 576 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 FASLGP48023 281 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 MRPL19P49406 292 aaKnown RBP13.86□□□□□ -0.19
TTC39A-216ENST00000530004 NUDT2P50583 147 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 RAB28P51157 221 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 SLBPQ14493 270 aaKnown RBP eCLIP13.86□□□□□ -0.19
TTC39A-216ENST00000530004 FUNDC1Q8IVP5 155 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 RNF175Q8N4F7 328 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 LINC01555Q8NAE3 123 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 WDR20Q8TBZ3 569 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 WDR34Q96EX3 536 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 APOLD1Q96LR9 279 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 RAB11FIP5Q9BXF6 653 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 EHD1Q9H4M9 534 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 XKR8Q9H6D3 395 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 NOP53Q9NZM5 478 aaKnown RBP13.86□□□□□ -0.19
TTC39A-216ENST00000530004 PCDHGA11Q9Y5H2 935 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 COLEC10Q9Y6Z7 277 aa13.86□□□□□ -0.19
TTC39A-216ENST00000530004 LAMA1P25391 3075 aa13.85□□□□□ -0.19
TTC39A-216ENST00000530004 NR5A2O00482 541 aa13.85□□□□□ -0.19
TTC39A-216ENST00000530004 SEC22BO75396 215 aa13.85□□□□□ -0.19
TTC39A-216ENST00000530004 RSL1D1O76021 490 aaKnown RBP13.85□□□□□ -0.19
TTC39A-216ENST00000530004 PCNAP12004 261 aa13.85□□□□□ -0.19
TTC39A-216ENST00000530004 CDH1P12830 882 aa13.85□□□□□ -0.19
TTC39A-216ENST00000530004 NDUFS1P28331 727 aa13.85□□□□□ -0.19
TTC39A-216ENST00000530004 PKLRP30613 574 aa13.85□□□□□ -0.19
TTC39A-216ENST00000530004 PGM1P36871 562 aa13.85□□□□□ -0.19
TTC39A-216ENST00000530004 HHEXQ03014 270 aa13.85□□□□□ -0.19
TTC39A-216ENST00000530004 ZNF33BQ06732 778 aa13.85□□□□□ -0.19
TTC39A-216ENST00000530004 MAD2L1Q13257 205 aaPredicted RBP13.85□□□□□ -0.19
TTC39A-216ENST00000530004 DDX39BQ13838 428 aaKnown RBP13.85□□□□□ -0.19
TTC39A-216ENST00000530004 SMU1Q2TAY7 513 aa13.85□□□□□ -0.19
TTC39A-216ENST00000530004 INAVAQ3KP66 663 aa13.85□□□□□ -0.19
TTC39A-216ENST00000530004 PDCD4Q53EL6 469 aaKnown RBP13.85□□□□□ -0.19
TTC39A-216ENST00000530004 PAGE2BQ5JRK9 111 aa13.85□□□□□ -0.19
TTC39A-216ENST00000530004 IL23RQ5VWK5 629 aa13.85□□□□□ -0.19
TTC39A-216ENST00000530004 MED27Q6P2C8 311 aa13.85□□□□□ -0.19
TTC39A-216ENST00000530004 ZFAND4Q86XD8 727 aa13.85□□□□□ -0.19
TTC39A-216ENST00000530004 TRIM48Q8IWZ4 208 aa13.85□□□□□ -0.19
TTC39A-216ENST00000530004 C10orf67Q8IYJ2 551 aa13.85□□□□□ -0.19
TTC39A-216ENST00000530004 AVL9Q8NBF6 648 aa13.85□□□□□ -0.19
TTC39A-216ENST00000530004 OR7G3Q8NG95 312 aa13.85□□□□□ -0.19
TTC39A-216ENST00000530004 SLC45A3Q96JT2 553 aa13.85□□□□□ -0.19
TTC39A-216ENST00000530004 NPAS2Q99743 824 aa13.85□□□□□ -0.19
TTC39A-216ENST00000530004 EFCAB11Q9BUY7 163 aa13.85□□□□□ -0.19
TTC39A-216ENST00000530004 SLC25A23Q9BV35 468 aa13.85□□□□□ -0.19
TTC39A-216ENST00000530004 PCBD2Q9H0N5 130 aa13.85□□□□□ -0.19
TTC39A-216ENST00000530004 C1orf109Q9NX04 203 aa13.85□□□□□ -0.19
TTC39A-216ENST00000530004 ICKQ9UPZ9 632 aa13.85□□□□□ -0.19
TTC39A-216ENST00000530004 EIF3LQ9Y262 564 aaKnown RBP13.85□□□□□ -0.19
TTC39A-216ENST00000530004 ARHGEF17Q96PE2 2063 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms