RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 VITQ6UXI7 678 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 TPRG1Q6ZUI0 275 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 CHST9Q7L1S5 443 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 C16orf82Q7Z2V1 217 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 DGLUCYQ7Z3D6 616 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 DNAJB7Q7Z6W7 309 aaPredicted RBP4.58□□□□□ -1.68
CSDE1-212ENST00000529046 ITIH5Q86UX2 942 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 DSELQ8IZU8 1212 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 PCDH20Q8N6Y1 951 aaKnown RBP4.58□□□□□ -1.68
CSDE1-212ENST00000529046 GPATCH11Q8N954 259 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 HJURPQ8NCD3 748 aaPredicted RBP4.58□□□□□ -1.68
CSDE1-212ENST00000529046 CSNK2A3Q8NEV1 391 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 SPPL2BQ8TCT7 592 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 TMED6Q8WW62 240 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 FAM3CQ92520 227 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 PSMG2Q969U7 264 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 C18orf25Q96B23 403 aaPredicted RBP4.58□□□□□ -1.68
CSDE1-212ENST00000529046 LMLNQ96KR4 655 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 ZNF385AQ96PM9 386 aaKnown RBP4.58□□□□□ -1.68
CSDE1-212ENST00000529046 BARD1Q99728 777 aaKnown RBP4.58□□□□□ -1.68
CSDE1-212ENST00000529046 KXD1Q9BQD3 176 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 SYNCQ9H7C4 482 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 DDX31Q9H8H2 851 aaKnown RBP4.58□□□□□ -1.68
CSDE1-212ENST00000529046 RPF1Q9H9Y2 349 aaKnown RBP4.58□□□□□ -1.68
CSDE1-212ENST00000529046 SEBOXQ9HB31 216 aaPredicted RBP4.58□□□□□ -1.68
CSDE1-212ENST00000529046 PARVGQ9HBI0 331 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 POLD4Q9HCU8 107 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 ZNF224Q9NZL3 707 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 SESN1Q9Y6P5 492 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 R4GN57 208 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 GVINP1Q7Z2Y8 2422 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 C1orf226A1L170 272 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 MTMR11A4FU01 709 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 PP2D1A8MPX8 630 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 HEPACAM2A8MVW5 462 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 ZNF587BE7ETH6 402 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 I3L4J1 428 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 M0QZ24 198 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 SPINT2O43291 252 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 TIPRLO75663 272 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 AKAP3O75969 853 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 KDM4BO94953 1096 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 PMS2P2O95744 297 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 RETP07949 1114 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 CXCL8P10145 99 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 ODC1P11926 461 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 ALOX12P18054 663 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 S1PR1P21453 382 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 CDC25CP30307 473 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 BDKRB2P30411 391 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 PPARGP37231 505 aaPredicted RBP4.57□□□□□ -1.68
CSDE1-212ENST00000529046 TNFSF9P41273 254 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 CXCL12P48061 93 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 LIG4P49917 911 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 ART1P52961 327 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 CDH8P55286 799 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 OSTNP61366 133 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 CREB5Q02930 508 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 SPOCK1Q08629 439 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 ALCAMQ13740 583 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 IZUMO4Q1ZYL8 232 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 ZNF805Q5CZA5 627 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 C9orf57Q5W0N0 161 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 ARMCX5Q6P1M9 558 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 CFAP161Q6P656 301 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 RHBDF2Q6PJF5 856 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 SLC36A4Q6YBV0 504 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 ZNF720Q7Z2F6 126 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 ARID3BQ8IVW6 561 aaPredicted RBP4.57□□□□□ -1.68
CSDE1-212ENST00000529046 C1orf87Q8N0U7 546 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 THAP6Q8TBB0 222 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 ING5Q8WYH8 240 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 RAD54LQ92698 747 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 TANKQ92844 425 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 TCEAL4Q96EI5 215 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 FAM120BQ96EK7 910 aaKnown RBP4.57□□□□□ -1.68
CSDE1-212ENST00000529046 CALML4Q96GE6 196 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 RSRC1Q96IZ7 334 aaKnown RBP4.57□□□□□ -1.68
CSDE1-212ENST00000529046 SENP8Q96LD8 212 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 TIGD1Q96MW7 591 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 EBF2Q9HAK2 575 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 LMAN1LQ9HAT1 526 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 OLFML3Q9NRN5 406 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 OCIAD1Q9NX40 245 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 TRMT1Q9NXH9 659 aaKnown RBP4.57□□□□□ -1.68
CSDE1-212ENST00000529046 FBXL17Q9UF56 701 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 TBC1D29Q9UFV1 150 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 TUBGCP4Q9UGJ1 667 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 SIX4Q9UIU6 781 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 GPR34Q9UPC5 381 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 YIPF1Q9Y548 306 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 PCDHGB1Q9Y5G3 927 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 SPTBN4Q9H254 2564 aa4.57□□□□□ -1.68
CSDE1-212ENST00000529046 MYH15Q9Y2K3 1946 aa4.56□□□□□ -1.68
CSDE1-212ENST00000529046 OTOGLQ3ZCN5 2332 aa4.56□□□□□ -1.68
CSDE1-212ENST00000529046 COL4A2P08572 1712 aa4.56□□□□□ -1.68
CSDE1-212ENST00000529046 LILRA5A6NI73 299 aa4.56□□□□□ -1.68
CSDE1-212ENST00000529046 PRSS47A8MTI9 375 aa4.56□□□□□ -1.68
CSDE1-212ENST00000529046 KPNA7A9QM74 516 aa4.56□□□□□ -1.68
CSDE1-212ENST00000529046 FAM90A26D6RGX4 464 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms