RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 DCUN1D3Q8IWE4 304 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 LMNTD2Q8IXW0 634 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 ZNF808Q8N4W9 903 aaPredicted RBP8.12□□□□□ -1.11
SSBP3-212ENST00000528930 SLC38A9Q8NBW4 561 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 OR1L3Q8NH93 324 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 CHTF18Q8WVB6 975 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 RELTQ969Z4 430 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 FAM136AQ96C01 138 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 PWWP2AQ96N64 755 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 IL17FQ96PD4 163 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 EBNA1BP2Q99848 306 aaKnown RBP8.12□□□□□ -1.11
SSBP3-212ENST00000528930 WDR83Q9BRX9 315 aaKnown RBP8.12□□□□□ -1.11
SSBP3-212ENST00000528930 FAM60AQ9NP50 221 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 LHX9Q9NQ69 397 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 FBXO6Q9NRD1 293 aaPredicted RBP8.12□□□□□ -1.11
SSBP3-212ENST00000528930 C20orf96Q9NUD7 363 aaPredicted RBP8.12□□□□□ -1.11
SSBP3-212ENST00000528930 CIDEBQ9UHD4 219 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 LNPEPQ9UIQ6 1025 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 ADAM21Q9UKJ8 722 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 RUVBL2Q9Y230 463 aaKnown RBP8.12□□□□□ -1.11
SSBP3-212ENST00000528930 SNRNP200O75643 2136 aaKnown RBP8.12□□□□□ -1.11
SSBP3-212ENST00000528930 SPTBP11277 2137 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 A0A0J9YY10 115 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 KRT87PA6NCN2 255 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 ADARB2-AS1A8MUL3 147 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 ISM1B1AKI9 464 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 H3BMH7 237 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 RASGRF2O14827 1237 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 CREG1O75629 220 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 SCRG1O75711 98 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 SEC31AO94979 1220 aaKnown RBP8.11□□□□□ -1.11
SSBP3-212ENST00000528930 TTC4O95801 387 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 MT-ND3P03897 115 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 RPN2P04844 631 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 ERVK-10P10266 1014 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 NID1P14543 1247 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 CHRM3P20309 590 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 GABRB3P28472 473 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 ATP5DP30049 168 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 DLSTP36957 453 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 BDKRB1P46663 353 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 ITGA8P53708 1063 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 ETF1P62495 437 aaKnown RBP8.11□□□□□ -1.11
SSBP3-212ENST00000528930 MRPS25P82663 173 aaKnown RBP8.11□□□□□ -1.11
SSBP3-212ENST00000528930 MPP1Q00013 466 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 TIAL1Q01085 375 aaKnown RBP eCLIP8.11□□□□□ -1.11
SSBP3-212ENST00000528930 KIR2DS3Q14952 304 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 SLC5A12Q1EHB4 618 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 KLHL38Q2WGJ6 581 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 ACSBG2Q5FVE4 666 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 SPANXN3Q5MJ09 141 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 TBCELQ5QJ74 424 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 FAM199XQ6PEV8 388 aaPredicted RBP8.11□□□□□ -1.11
SSBP3-212ENST00000528930 CNSTQ6PJW8 725 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 CYHR1Q6ZMK1 362 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 KCNMB4Q86W47 210 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 CNTN4Q8IWV2 1026 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 FAM20CQ8IXL6 584 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 C2orf73Q8N5S3 287 aaPredicted RBP8.11□□□□□ -1.11
SSBP3-212ENST00000528930 ZBTB2Q8N680 514 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 C2CD4AQ8NCU7 369 aaPredicted RBP8.11□□□□□ -1.11
SSBP3-212ENST00000528930 OR2L8Q8NGY9 312 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 OR8K5Q8NH50 307 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 GIMAP7Q8NHV1 300 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 CALML6Q8TD86 181 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 DENND1AQ8TEH3 1009 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 RAD51AP1Q96B01 352 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 KRT12Q99456 494 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 CHRNA10Q9GZZ6 450 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 SYTL2Q9HCH5 934 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 IARS2Q9NSE4 1012 aaKnown RBP8.11□□□□□ -1.11
SSBP3-212ENST00000528930 SOHLH2Q9NX45 425 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 KLHL42Q9P2K6 505 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 FBXO5Q9UKT4 447 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 PADI1Q9ULC6 663 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 PCDHGA6Q9Y5G7 932 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 TEX264Q9Y6I9 313 aa8.11□□□□□ -1.11
SSBP3-212ENST00000528930 TLN2Q9Y4G6 2542 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 EFCAB8A8MWE9 144 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 TMEM150CB9EJG8 249 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 E5RI56 91 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 C19orf84I3L1E1 186 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 KDM1AO60341 852 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 CPNE3O75131 537 aaKnown RBP8.1□□□□□ -1.11
SSBP3-212ENST00000528930 PSIP1O75475 530 aaKnown RBP8.1□□□□□ -1.11
SSBP3-212ENST00000528930 AHSGP02765 367 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 CTSBP07858 339 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 RORAP35398 523 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 ELK3P41970 407 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 RPL21P46778 160 aaKnown RBP8.1□□□□□ -1.11
SSBP3-212ENST00000528930 HNRNPH2P55795 449 aaKnown RBP8.1□□□□□ -1.11
SSBP3-212ENST00000528930 CHAF1BQ13112 559 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 BBS9Q3SYG4 887 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 HP1BP3Q5SSJ5 553 aaPredicted RBP8.1□□□□□ -1.11
SSBP3-212ENST00000528930 LCN10Q6JVE6 187 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 SYT10Q6XYQ8 523 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 TMEM126BQ8IUX1 230 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 PDIK1LQ8N165 341 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 DNAJC22Q8N4W6 341 aa8.1□□□□□ -1.11
SSBP3-212ENST00000528930 C19orf47Q8N9M1 422 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms