RNA–Protein interactions for RNA: ENST00000528462.5

PACSIN3-205, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 1,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-205ENST00000528462 TNFRSF12AQ9NP84 129 aa21.11■□□□□ 0.97
PACSIN3-205ENST00000528462 KLHL20Q9Y2M5 609 aa21.11■□□□□ 0.97
PACSIN3-205ENST00000528462 PCDHGA11Q9Y5H2 935 aa21.11■□□□□ 0.97
PACSIN3-205ENST00000528462 POLR3GO15318 223 aaPredicted RBP21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 OR4F21O95013 312 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 HGFP14210 728 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 ARL1P40616 181 aaPredicted RBP21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 GYS2P54840 703 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 HSD11B2P80365 405 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 INSM1Q01101 510 aaPredicted RBP21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 HIST2H2ACQ16777 129 aaPredicted RBP21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 CDCP2Q5VXM1 449 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 HIST2H2AA3Q6FI13 130 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 TMIGD1Q6UXZ0 262 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 RNF44Q7L0R7 432 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 ADCK2Q7Z695 626 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 TBC1D19Q8N5T2 526 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 THAP11Q96EK4 314 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 KLHL3Q9UH77 587 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 APOBEC2Q9Y235 224 aaKnown RBP21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 KNTC1P50748 2209 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 MAP3K7O43318 606 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 CTSVO60911 334 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 UROSP10746 265 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 NELFEP18615 380 aaKnown RBP21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 CCKBRP32239 447 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 PDX1P52945 283 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 RPS15AP62244 130 aaKnown RBP21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 ZNF33BQ06732 778 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 CPSF6Q16630 551 aaKnown RBP eCLIP21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 MED27Q6P2C8 311 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 FBXO42Q6P3S6 717 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 SLCO6A1Q86UG4 719 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 MYLK4Q86YV6 388 aaPredicted RBP21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 CLYBLQ8N0X4 340 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 ZNF740Q8NDX6 193 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 TTLQ8NG68 377 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 METTL6Q8TCB7 284 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 REPS1Q96D71 796 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 TMEM74Q96NL1 305 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 SPNS1Q9H2V7 528 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 RHBGQ9H310 441 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 SYNDIG1Q9H7V2 258 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 PDE7BQ9NP56 450 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 SLCO1B3Q9NPD5 702 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 ZDHHC2Q9UIJ5 367 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 ZNF490Q9ULM2 529 aaPredicted RBP21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 TRAF6Q9Y4K3 522 aa21.1■□□□□ 0.97
PACSIN3-205ENST00000528462 TCP11X1B4DZS4 312 aa21.09■□□□□ 0.97
PACSIN3-205ENST00000528462 HAT1O14929 419 aa21.09■□□□□ 0.97
PACSIN3-205ENST00000528462 AZIN1O14977 448 aa21.09■□□□□ 0.97
PACSIN3-205ENST00000528462 CAPN1P07384 714 aa21.09■□□□□ 0.97
PACSIN3-205ENST00000528462 MPSTP25325 297 aa21.09■□□□□ 0.97
PACSIN3-205ENST00000528462 AHRP35869 848 aa21.09■□□□□ 0.97
PACSIN3-205ENST00000528462 SCTRP47872 440 aa21.09■□□□□ 0.97
PACSIN3-205ENST00000528462 RPL14P50914 215 aaKnown RBP21.09■□□□□ 0.97
PACSIN3-205ENST00000528462 ZRSR2Q15696 482 aaKnown RBP21.09■□□□□ 0.97
PACSIN3-205ENST00000528462 SH2D4BQ5SQS7 431 aa21.09■□□□□ 0.97
PACSIN3-205ENST00000528462 RNF165Q6ZSG1 346 aa21.09■□□□□ 0.97
PACSIN3-205ENST00000528462 D2HGDHQ8N465 521 aa21.09■□□□□ 0.97
PACSIN3-205ENST00000528462 ZNF781Q8N8C0 355 aa21.09■□□□□ 0.97
PACSIN3-205ENST00000528462 CDYL2Q8N8U2 506 aa21.09■□□□□ 0.97
PACSIN3-205ENST00000528462 OR7G3Q8NG95 312 aa21.09■□□□□ 0.97
PACSIN3-205ENST00000528462 CCDC74BQ96LY2 380 aa21.09■□□□□ 0.97
PACSIN3-205ENST00000528462 OR2A5Q96R48 311 aa21.09■□□□□ 0.97
PACSIN3-205ENST00000528462 ZFYVE21Q9BQ24 234 aa21.09■□□□□ 0.97
PACSIN3-205ENST00000528462 SHCBP1LQ9BZQ2 653 aa21.09■□□□□ 0.97
PACSIN3-205ENST00000528462 FAM60AQ9NP50 221 aa21.09■□□□□ 0.97
PACSIN3-205ENST00000528462 SNX6Q9UNH7 406 aa21.09■□□□□ 0.97
PACSIN3-205ENST00000528462 NRP2O60462 931 aa21.08■□□□□ 0.97
PACSIN3-205ENST00000528462 FTH1P19P0C7X4 201 aa21.08■□□□□ 0.97
PACSIN3-205ENST00000528462 SERPINB1P30740 379 aa21.08■□□□□ 0.97
PACSIN3-205ENST00000528462 HK2P52789 917 aa21.08■□□□□ 0.97
PACSIN3-205ENST00000528462 FOXA1P55317 472 aa21.08■□□□□ 0.97
PACSIN3-205ENST00000528462 SIM1P81133 766 aaPredicted RBP21.08■□□□□ 0.97
PACSIN3-205ENST00000528462 MEF2AQ02078 507 aaPredicted RBP21.08■□□□□ 0.97
PACSIN3-205ENST00000528462 UGT3A2Q3SY77 523 aa21.08■□□□□ 0.97
PACSIN3-205ENST00000528462 ZC3H12BQ5HYM0 836 aaKnown RBP21.08■□□□□ 0.97
PACSIN3-205ENST00000528462 KANK2Q63ZY3 851 aa21.08■□□□□ 0.97
PACSIN3-205ENST00000528462 FRG2Q64ET8 278 aa21.08■□□□□ 0.97
PACSIN3-205ENST00000528462 CRLF3Q8IUI8 442 aa21.08■□□□□ 0.97
PACSIN3-205ENST00000528462 CACTIN-AS1Q8N1I8 211 aa21.08■□□□□ 0.97
PACSIN3-205ENST00000528462 DNAJC22Q8N4W6 341 aa21.08■□□□□ 0.97
PACSIN3-205ENST00000528462 WDR20Q8TBZ3 569 aa21.08■□□□□ 0.97
PACSIN3-205ENST00000528462 ZNF317Q96PQ6 595 aaPredicted RBP21.08■□□□□ 0.97
PACSIN3-205ENST00000528462 FRG2BQ96QU4 278 aa21.08■□□□□ 0.97
PACSIN3-205ENST00000528462 RTKNQ9BST9 563 aa21.08■□□□□ 0.97
PACSIN3-205ENST00000528462 KLHL25Q9H0H3 589 aa21.08■□□□□ 0.97
PACSIN3-205ENST00000528462 ENAMQ9NRM1 1142 aa21.08■□□□□ 0.97
PACSIN3-205ENST00000528462 ADGRE2Q9UHX3 823 aa21.08■□□□□ 0.97
PACSIN3-205ENST00000528462 PPT2Q9UMR5 302 aa21.08■□□□□ 0.97
PACSIN3-205ENST00000528462 PCDHGA4Q9Y5G9 962 aa21.08■□□□□ 0.97
PACSIN3-205ENST00000528462 COL27A1Q8IZC6 1860 aaPredicted RBP21.07■□□□□ 0.96
PACSIN3-205ENST00000528462 TMX2-CTNND1H3BSU7 103 aa21.07■□□□□ 0.96
PACSIN3-205ENST00000528462 PRAMEF10O60809 474 aa21.07■□□□□ 0.96
PACSIN3-205ENST00000528462 EDF1O60869 148 aaKnown RBP21.07■□□□□ 0.96
PACSIN3-205ENST00000528462 KRT6AP02538 564 aa21.07■□□□□ 0.96
PACSIN3-205ENST00000528462 KRT6BP04259 564 aa21.07■□□□□ 0.96
PACSIN3-205ENST00000528462 PIK3CBP42338 1070 aa21.07■□□□□ 0.96
PACSIN3-205ENST00000528462 GABRA4P48169 554 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms