RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 TRNT1Q96Q11 434 aaKnown RBP7.29□□□□□ -1.24
SOX6-208ENST00000527619 RHNO1Q9BSD3 238 aa7.29□□□□□ -1.24
SOX6-208ENST00000527619 C11orf84Q9BUA3 381 aaPredicted RBP7.29□□□□□ -1.24
SOX6-208ENST00000527619 CFHR5Q9BXR6 569 aa7.29□□□□□ -1.24
SOX6-208ENST00000527619 BEX2Q9BXY8 128 aa7.29□□□□□ -1.24
SOX6-208ENST00000527619 NIPAL2Q9H841 368 aa7.29□□□□□ -1.24
SOX6-208ENST00000527619 GSN-AS1Q9NRJ2 163 aa7.29□□□□□ -1.24
SOX6-208ENST00000527619 HPF1Q9NWY4 346 aa7.29□□□□□ -1.24
SOX6-208ENST00000527619 SLAMF8Q9P0V8 285 aa7.29□□□□□ -1.24
SOX6-208ENST00000527619 AASSQ9UDR5 926 aa7.29□□□□□ -1.24
SOX6-208ENST00000527619 FEM1BQ9UK73 627 aa7.29□□□□□ -1.24
SOX6-208ENST00000527619 PLCL2Q9UPR0 1127 aa7.29□□□□□ -1.24
SOX6-208ENST00000527619 ERVW-1Q9UQF0 538 aa7.29□□□□□ -1.24
SOX6-208ENST00000527619 PCDHB9Q9Y5E1 797 aa7.29□□□□□ -1.24
SOX6-208ENST00000527619 COL11A2P13942 1736 aaPredicted RBP7.29□□□□□ -1.24
SOX6-208ENST00000527619 CCDC182A6NF36 153 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 EFCAB10A6NFE3 127 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 TTLL8A6PVC2 850 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 I3L521 148 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 J3KRW8 73 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 TFECO14948 347 aaPredicted RBP7.28□□□□□ -1.24
SOX6-208ENST00000527619 AZIN1O14977 448 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 FZD6O60353 706 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 EIF1BO60739 113 aaKnown RBP7.28□□□□□ -1.24
SOX6-208ENST00000527619 ZNF623O75123 536 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 VPS4BO75351 444 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 OR2B3O76000 313 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 ALPPP05187 535 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 ACAA1P09110 424 aaPredicted RBP7.28□□□□□ -1.24
SOX6-208ENST00000527619 CA5AP35218 305 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 DCTP40126 519 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 EIF1P41567 113 aaKnown RBP7.28□□□□□ -1.24
SOX6-208ENST00000527619 ZFP36L2P47974 494 aaKnown RBP7.28□□□□□ -1.24
SOX6-208ENST00000527619 MRPL19P49406 292 aaKnown RBP7.28□□□□□ -1.24
SOX6-208ENST00000527619 GZMKP49863 264 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 CASP6P55212 293 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 HUNKP57058 714 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 CDH17Q12864 832 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 GRIK2Q13002 908 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 GOLGA7BQ2TAP0 167 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 BTBD16Q32M84 506 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 UNC50Q53HI1 259 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 ZMAT1Q5H9K5 638 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 KIAA0319Q5VV43 1072 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 MAP1SQ66K74 1059 aaPredicted RBP7.28□□□□□ -1.24
SOX6-208ENST00000527619 BRAT1Q6PJG6 821 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 SPATA19Q7Z5L4 167 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 TMEM179BQ7Z7N9 219 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 HIPK1Q86Z02 1210 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 CYP4Z2PQ8N1L4 340 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 FAM86B1Q8N7N1 296 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 ACOX2Q99424 681 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 PRRG3Q9BZD7 231 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 MMP28Q9H239 520 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 ACTR8Q9H981 624 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 CYP3A43Q9HB55 503 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 NMUR1Q9HB89 426 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 SMPD4Q9NXE4 827 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 THUMPD1Q9NXG2 353 aaKnown RBP7.28□□□□□ -1.24
SOX6-208ENST00000527619 WWOXQ9NZC7 414 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 KLHL21Q9UJP4 597 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 NRXN2Q9P2S2 1712 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 LINC00862A6NCI5 91 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 M0R082 166 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 SLC22A3O75751 556 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 ASGR1P07306 291 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 FBXO45P0C2W1 286 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 GJA1P17302 382 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 EFNA1P20827 205 aaPredicted RBP7.28□□□□□ -1.24
SOX6-208ENST00000527619 IGFBP5P24593 272 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 SLC1A2P43004 574 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 POLR2JP52435 117 aaKnown RBP7.28□□□□□ -1.24
SOX6-208ENST00000527619 DIO3P55073 304 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 ARPP19P56211 112 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 SH3BP2P78314 561 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 C17orf67Q0P5P2 114 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 PPP1R8Q12972 351 aaKnown RBP7.28□□□□□ -1.24
SOX6-208ENST00000527619 GBX1Q14549 363 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 PAFAH1B3Q15102 231 aaKnown RBP7.28□□□□□ -1.24
SOX6-208ENST00000527619 SSX2Q16385 188 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 NKG7Q16617 165 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 FUT10Q6P4F1 479 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 TMEM81Q6P7N7 255 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 ZNF574Q6ZN55 896 aaPredicted RBP7.28□□□□□ -1.24
SOX6-208ENST00000527619 SLC46A3Q7Z3Q1 461 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 YIPF7Q8N8F6 280 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 OR4M2Q8NGB6 313 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 IFI44Q8TCB0 444 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 PXYLP1Q8TE99 480 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 TEX37Q96LM6 180 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 CCDC115Q96NT0 180 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 SIGLEC11Q96RL6 698 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 SARGQ9BW04 601 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 MRPL4Q9BYD3 311 aaKnown RBP7.28□□□□□ -1.24
SOX6-208ENST00000527619 RIBC2Q9H4K1 309 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 MID1IP1Q9NPA3 183 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 AIG1Q9NVV5 245 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 SIX4Q9UIU6 781 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 FZD10Q9ULW2 581 aa7.28□□□□□ -1.24
SOX6-208ENST00000527619 RUVBL1Q9Y265 456 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms