RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 PABPC1P11940 636 aaKnown RBP11.58□□□□□ -0.55
CHMP1B-201ENST00000526991 WASP42768 502 aa11.58□□□□□ -0.55
CHMP1B-201ENST00000526991 MRPL19P49406 292 aaKnown RBP11.58□□□□□ -0.55
CHMP1B-201ENST00000526991 DGKEP52429 567 aa11.58□□□□□ -0.55
CHMP1B-201ENST00000526991 NR1D2Q14995 579 aa11.58□□□□□ -0.55
CHMP1B-201ENST00000526991 TMEM240Q5SV17 173 aa11.58□□□□□ -0.55
CHMP1B-201ENST00000526991 LAIR1Q6GTX8 287 aa11.58□□□□□ -0.55
CHMP1B-201ENST00000526991 NOXRED1Q6NXP6 359 aa11.58□□□□□ -0.55
CHMP1B-201ENST00000526991 CCDC149Q6ZUS6 474 aa11.58□□□□□ -0.55
CHMP1B-201ENST00000526991 C2orf73Q8N5S3 287 aaPredicted RBP11.58□□□□□ -0.55
CHMP1B-201ENST00000526991 SPPL3Q8TCT6 385 aa11.58□□□□□ -0.55
CHMP1B-201ENST00000526991 USP7Q93009 1102 aa11.58□□□□□ -0.55
CHMP1B-201ENST00000526991 NRBF2Q96F24 287 aa11.58□□□□□ -0.55
CHMP1B-201ENST00000526991 NODALQ96S42 347 aa11.58□□□□□ -0.55
CHMP1B-201ENST00000526991 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.58□□□□□ -0.55
CHMP1B-201ENST00000526991 TRPS1Q9UHF7 1281 aa11.58□□□□□ -0.55
CHMP1B-201ENST00000526991 TMEFF2Q9UIK5 374 aaPredicted RBP11.58□□□□□ -0.55
CHMP1B-201ENST00000526991 MRPS23Q9Y3D9 190 aaKnown RBP11.58□□□□□ -0.55
CHMP1B-201ENST00000526991 ORC6Q9Y5N6 252 aa11.58□□□□□ -0.55
CHMP1B-201ENST00000526991 NOX1Q9Y5S8 564 aa11.58□□□□□ -0.55
CHMP1B-201ENST00000526991 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 CLIC1O00299 241 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 FADS2O95864 444 aaKnown RBP11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 C1SP09871 688 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 LAMP1P11279 417 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 AOAHP28039 575 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 PSMB9P28065 219 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 KIR3DL1P43629 444 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 RAD23AP54725 363 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 SNRPD1P62314 119 aaKnown RBP11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 VLDLRP98155 873 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 OCA2Q04671 838 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 NAE1Q13564 534 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 GRIN2CQ14957 1233 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 TPRG1Q6ZUI0 275 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 GPR149Q86SP6 731 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 C11orf74Q86VG3 221 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 ATG16L2Q8NAA4 619 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 FIBINQ8TAL6 211 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 MCOLN3Q8TDD5 553 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 IRF7Q92985 503 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 EMILIN2Q9BXX0 1053 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 THG1LQ9NWX6 298 aaKnown RBP11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 PDP1Q9P0J1 537 aaPredicted RBP11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 SNX6Q9UNH7 406 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 TRBV5-4A0A0C4DH59 114 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 E7EQ34 232 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 SCAMP1O15126 338 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 BCAS1O75363 584 aaPredicted RBP11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 ANGPTL1O95841 491 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 OR56A5P0C7T3 313 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 CD22P20273 847 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 CLDN8P56748 225 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 ISL1P61371 349 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 C9orf50Q5SZB4 431 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 IER5LQ5T953 404 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 FRG2Q64ET8 278 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 USP45Q70EL2 814 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 GLB1L3Q8NCI6 653 aaPredicted RBP11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 OR52J3Q8NH60 311 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 OR5K1Q8NHB7 308 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 SCRN2Q96FV2 425 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 FRG2BQ96QU4 278 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 TMEM121BQ9BXQ6 578 aaPredicted RBP11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 C3orf18Q9UK00 162 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 PTPRSQ13332 1948 aa11.58□□□□□ -0.56
CHMP1B-201ENST00000526991 EVPLLA8MZ36 301 aa11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 KDM1AO60341 852 aa11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 SEC14L2O76054 403 aa11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 ACPPP15309 386 aa11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 BMPR1AP36894 532 aa11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 PBX2P40425 430 aa11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 RECQLP46063 649 aaPredicted RBP11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 BDKRB1P46663 353 aa11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 SLC6A11P48066 632 aa11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 VBP1P61758 197 aa11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 SLC7A9P82251 487 aa11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 SKIV2LQ15477 1246 aaKnown RBP11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 HKDC1Q2TB90 917 aa11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 FBXO46Q6PJ61 603 aaPredicted RBP11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 HSD11B1LQ7Z5J1 315 aa11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 ALDH16A1Q8IZ83 802 aa11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 ZCCHC7Q8N3Z6 543 aaKnown RBP11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 LEMD2Q8NC56 503 aa11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 DDHD1Q8NEL9 900 aa11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 ZNF420Q8TAQ5 688 aaPredicted RBP11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 RSPRY1Q96DX4 576 aa11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 CCDC115Q96NT0 180 aa11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 KCNH6Q9H252 994 aa11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 RMND5AQ9H871 391 aa11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 SPHK2Q9NRA0 654 aa11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 SH3BP4Q9P0V3 963 aa11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 SLC25A13Q9UJS0 675 aa11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 STOML2Q9UJZ1 356 aa11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 SAMHD1Q9Y3Z3 626 aaKnown RBP11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 PRKAB1Q9Y478 270 aa11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 LINC01553A4QN01 128 aa11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 PRR23AA6NEV1 266 aa11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 TMCC2O75069 709 aa11.57□□□□□ -0.56
CHMP1B-201ENST00000526991 ETHE1O95571 254 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms