RNA–Protein interactions for RNA: ENST00000524127.5

CTNNA1-241, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-241ENST00000524127 SCN1BQ07699 218 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 ITKQ08881 620 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 SLC10A7Q0GE19 358 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 HSPA14Q0VDF9 509 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 CSTF3Q12996 717 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 TNK1Q13470 666 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 SERINC3Q13530 473 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 CAMK2GQ13555 558 aaPredicted RBP4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 GTF2H2Q13888 395 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 GTF2H3Q13889 308 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 DSC3Q14574 896 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 IHHQ14623 411 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 TAF1AQ15573 450 aaPredicted RBP4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 VMACQ2NL98 169 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 HKDC1Q2TB90 917 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 TBRG1Q3YBR2 411 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 FAM174BQ3ZCQ3 159 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 IQCCQ4KMZ1 466 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 BCL7AQ4VC05 210 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 RFTN2Q52LD8 501 aaPredicted RBP4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 GPAT3Q53EU6 434 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 USP39Q53GS9 565 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 ARMCX4Q5H9R4 360 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 PRSS36Q5K4E3 855 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 WDR45BQ5MNZ6 344 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 C10orf62Q5T681 223 aaPredicted RBP4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 FAM219BQ5XKK7 198 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 OR4F3Q6IEY1 312 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 GTF2H2CQ6P1K8 395 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 CNKSR3Q6P9H4 555 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 SCIMPQ6UWF3 145 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 GCNT7Q6ZNI0 430 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 IDO2Q6ZQW0 420 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 AHSA2Q719I0 299 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 MILR1Q7Z6M3 343 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 GALNT5Q7Z7M9 940 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 C14orf80Q86SX3 495 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 CCDC71Q8IV32 467 aaPredicted RBP4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 IQCF2Q8IXL9 164 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 SLC22A15Q8IZD6 547 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 NLGN4XQ8N0W4 816 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 VWA5B2Q8N398 1253 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 PGBD5Q8N414 524 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 FAM109AQ8N4B1 249 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 DEFB123Q8N688 67 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 NAT16Q8N8M0 369 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 GDPD1Q8N9F7 314 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 ATG16L2Q8NAA4 619 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 OR4F6Q8NGB9 312 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 OR10T2Q8NGX3 314 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 ZNF675Q8TD23 568 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 CD200R1Q8TD46 325 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 MYLIPQ8WY64 445 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 USP7Q93009 1102 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 MYLPFQ96A32 169 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 LINGO1Q96FE5 620 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 HMCESQ96FZ2 354 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 SLC39A13Q96H72 371 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 ZC3HAV1LQ96H79 300 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 EGLN2Q96KS0 407 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 CEP19Q96LK0 163 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 MAGEB10Q96LZ2 347 aaPredicted RBP4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 OR52E6Q96RD3 313 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 CDX2Q99626 313 aaPredicted RBP4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 PKMYT1Q99640 499 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 OSMRQ99650 979 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 GPR21Q99679 349 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 TBCDQ9BTW9 1192 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 NTMT1Q9BV86 223 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 TTLL2Q9BWV7 592 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 ZYG11BQ9C0D3 744 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 MKRN2Q9H000 416 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 SIK2Q9H0K1 926 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 IKZF5Q9H5V7 419 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 RUBCNLQ9H714 662 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 REEP1Q9H902 201 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 CERS4Q9HA82 394 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 C12orf10Q9HB07 376 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 LRTM1Q9HBL6 345 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 SMURF1Q9HCE7 757 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 SERHLQ9NQF3 203 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 RPRD1BQ9NQG5 326 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 PRDM6Q9NQX0 595 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 NDFIP2Q9NV92 336 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 MRPL39Q9NYK5 338 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 CD274Q9NZQ7 290 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 PDP1Q9P0J1 537 aaPredicted RBP4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 KIF17Q9P2E2 1029 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 KCNN3Q9UGI6 736 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 PHF11Q9UIL8 331 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 UTS2RQ9UKP6 389 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 PNMA8BQ9ULN7 279 aaPredicted RBP4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 PADI3Q9ULW8 664 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 STUB1Q9UNE7 303 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 SNX7Q9UNH6 387 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 MAPRE3Q9UPY8 281 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 DHRS7Q9Y394 339 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 SAMHD1Q9Y3Z3 626 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 KCTD3Q9Y597 815 aa4.8□□□□□ -1.64
CTNNA1-241ENST00000524127 PCDHB5Q9Y5E4 795 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms