RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	TRNAU1AP	Q9NX07	287 aa	Known RBP	7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	SELENON	Q9NZV5	590 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	GALP	Q9UBC7	116 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	SUN2	Q9UH99	717 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	EIF2B4	Q9UI10	523 aa	Known RBP	7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	TMEFF2	Q9UIK5	374 aa	Predicted RBP	7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	ERVW-1	Q9UQF0	538 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	AP3M1	Q9Y2T2	418 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	MAGED1	Q9Y5V3	778 aa	Predicted RBP	7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	ASPM	Q8IZT6	3477 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	GPR179	Q6PRD1	2367 aa		7.6	□□□□□ -1.19
SPIDR-223	ENST00000524033	DOCK8	Q8NF50	2099 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	ZNF99	A8MXY4	864 aa	Predicted RBP	7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033		H3BM21	787 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033		H7C0S8	307 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	BTN3A1	O00481	513 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	OR7A17	O14581	309 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	SLC9A3R1	O14745	358 aa	Predicted RBP	7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	TERT	O14746	1132 aa	Known RBP	7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	SLC22A1	O15245	554 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	DFNA5	O60443	496 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	MMP20	O60882	483 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	CNOT3	O75175	753 aa	Known RBP	7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	NDUFS2	O75306	463 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	CRCP	O75575	148 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	KCNH1	O95259	989 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	PRL	P01236	227 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	SEMG1	P04279	462 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	ALOX5	P09917	674 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	PKM	P14618	531 aa	Known RBP	7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	MSH3	P20585	1137 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	AGXT	P21549	392 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	CD6	P30203	668 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	ACVRL1	P37023	503 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	RXRG	P48443	463 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	MASP1	P48740	699 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	PCBP4	P57723	403 aa	Known RBP	7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	SLC7A9	P82251	487 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	IFITM3	Q01628	133 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	PLAUR	Q03405	335 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	CYP4F3	Q08477	520 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	GALNT3	Q14435	633 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	TAF1A	Q15573	450 aa	Predicted RBP	7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	RBBP7	Q16576	425 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	MEP1A	Q16819	746 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	RFX4	Q33E94	735 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	PLA2G4E	Q3MJ16	856 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	ATP6AP1L	Q52LC2	224 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	C2orf27A	Q580R0	203 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	RUNDC3A	Q59EK9	446 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	OTUD3	Q5T2D3	398 aa	Predicted RBP	7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	ATG9B	Q674R7	924 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	ANKRD34A	Q69YU3	496 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	NADSYN1	Q6IA69	706 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	SCIMP	Q6UWF3	145 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	SYT13	Q7L8C5	426 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	GOLGA7	Q7Z5G4	137 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	SYT9	Q86SS6	491 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	STK32C	Q86UX6	486 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	MICU2	Q8IYU8	434 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	ZCCHC7	Q8N3Z6	543 aa	Known RBP	7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	KIAA1958	Q8N8K9	716 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	DYNC2LI1	Q8TCX1	351 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	BLOC1S5	Q8TDH9	187 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	PHF10	Q8WUB8	498 aa	Known RBP	7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	UBTD2	Q8WUN7	234 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	S100Z	Q8WXG8	99 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	GTF2H4	Q92759	462 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	POP5	Q969H6	163 aa	Known RBP	7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	MYEOV	Q96EZ4	313 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	SLC47A1	Q96FL8	570 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	PDLIM5	Q96HC4	596 aa	Known RBP	7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	DACH2	Q96NX9	599 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	ACOX2	Q99424	681 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	RBM4B	Q9BQ04	359 aa	Known RBP	7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	HGH1	Q9BTY7	390 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	RBM4	Q9BWF3	364 aa	Known RBP	7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	UGT2B28	Q9BY64	529 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	P2RY12	Q9H244	342 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	ARRDC1-AS1	Q9H2J1	176 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	TNKS2	Q9H2K2	1166 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	TRIT1	Q9H3H1	467 aa	Known RBP	7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	ARMC7	Q9H6L4	198 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	RETREG1	Q9H6L5	497 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	ATP13A3	Q9H7F0	1226 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	SMURF2	Q9HAU4	748 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	NECTIN3	Q9NQS3	549 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	VAPA	Q9P0L0	249 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	CFAP97	Q9P2B7	532 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	NUDT5	Q9UKK9	219 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	MAN2B2	Q9Y2E5	1009 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	TMED5	Q9Y3A6	229 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	POLR3H	Q9Y535	204 aa	Predicted RBP	7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	COMMD10	Q9Y6G5	202 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	HSPE1-MOB4	S4R3N1	261 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	PMF1-BGLAP	U3KQ54	211 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033		V9GYQ6	96 aa		7.59	□□□□□ -1.19
SPIDR-223	ENST00000524033	FAM186A	A6NE01	2351 aa		7.59	□□□□□ -1.2
SPIDR-223	ENST00000524033	TTC34	A8MYJ7	566 aa		7.58	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms