RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 DUX1O43812 170 aa12.85□□□□□ -0.35
CLK4-210ENST00000522136 PDYNP01213 254 aa12.85□□□□□ -0.35
CLK4-210ENST00000522136 TROVE2P10155 538 aaKnown RBP eCLIP12.85□□□□□ -0.35
CLK4-210ENST00000522136 PCNAP12004 261 aa12.85□□□□□ -0.35
CLK4-210ENST00000522136 REEP5Q00765 189 aa12.85□□□□□ -0.35
CLK4-210ENST00000522136 DDX39BQ13838 428 aaKnown RBP12.85□□□□□ -0.35
CLK4-210ENST00000522136 SNAP47Q5SQN1 464 aa12.85□□□□□ -0.35
CLK4-210ENST00000522136 STPG1Q5TH74 334 aa12.85□□□□□ -0.35
CLK4-210ENST00000522136 MED27Q6P2C8 311 aa12.85□□□□□ -0.35
CLK4-210ENST00000522136 PAQR7Q86WK9 346 aa12.85□□□□□ -0.35
CLK4-210ENST00000522136 DDIASQ8IXT1 998 aa12.85□□□□□ -0.35
CLK4-210ENST00000522136 OR7G3Q8NG95 312 aa12.85□□□□□ -0.35
CLK4-210ENST00000522136 MTERF1Q99551 399 aaKnown RBP12.85□□□□□ -0.35
CLK4-210ENST00000522136 AIF1LQ9BQI0 150 aa12.85□□□□□ -0.35
CLK4-210ENST00000522136 EBF4Q9BQW3 602 aa12.85□□□□□ -0.35
CLK4-210ENST00000522136 SLC29A3Q9BZD2 475 aa12.85□□□□□ -0.35
CLK4-210ENST00000522136 NSRP1Q9H0G5 558 aaKnown RBP12.85□□□□□ -0.35
CLK4-210ENST00000522136 LRRN3Q9H3W5 708 aa12.85□□□□□ -0.35
CLK4-210ENST00000522136 WDR55Q9H6Y2 383 aaPredicted RBP12.85□□□□□ -0.35
CLK4-210ENST00000522136 EPHA6Q9UF33 1036 aa12.85□□□□□ -0.35
CLK4-210ENST00000522136 SNX7Q9UNH6 387 aa12.85□□□□□ -0.35
CLK4-210ENST00000522136 IGHV5-51A0A0C4DH38 117 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 A0A0G2JND7 137 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 GOLGA8QA0A0J9YX86 632 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 ATP6AP2A0A1C7CYW4 349 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 GOLGA8OA6NCC3 632 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 PCNX2A6NKB5 2137 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 GOLGA8NF8WBI6 632 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 ZW10O43264 779 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 OR1F1O43749 312 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 CTSVO60911 334 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 CBFA2T3O75081 653 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 ATP6AP2O75787 350 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 FAM107AO95990 144 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 STATHP02808 62 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 HIST2H2ACQ16777 129 aaPredicted RBP12.84□□□□□ -0.35
CLK4-210ENST00000522136 SLC9B1Q4ZJI4 515 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 PAGE2BQ5JRK9 111 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 FRG2Q64ET8 278 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 HIST2H2AA3Q6FI13 130 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 TMIGD1Q6UXZ0 262 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 ANKRD53Q8N9V6 530 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 WDR20Q8TBZ3 569 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 SELENOMQ8WWX9 145 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 ZDHHC12Q96GR4 267 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 TRAPPC9Q96Q05 1148 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 FRG2BQ96QU4 278 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 RAB33BQ9H082 229 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 SEMA6CQ9H3T2 930 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 EPB41L1Q9H4G0 881 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 ELOVL6Q9H5J4 265 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 SNX6Q9UNH7 406 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 PCDHGA11Q9Y5H2 935 aa12.84□□□□□ -0.35
CLK4-210ENST00000522136 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.83□□□□□ -0.35
CLK4-210ENST00000522136 OR2A25A4D2G3 310 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 A8MU76 341 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 SLCO1B7G3V0H7 640 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 H0YIV9 168 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 SNX3O60493 162 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 DIAPH2O60879 1101 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 SH3BGRLO75368 114 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 ULK1O75385 1050 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 KRT6AP02538 564 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 KRT6BP04259 564 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 ALOX15P16050 662 aaPredicted RBP12.83□□□□□ -0.35
CLK4-210ENST00000522136 EPHA3P29320 983 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 BCL6P41182 706 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 KRT6CP48668 564 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 IDH3AP50213 366 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 CYP4F2P78329 520 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 CYP4F3Q08477 520 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 LAPTM5Q13571 262 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 CCDC157Q569K6 752 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 FBXO42Q6P3S6 717 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 ZNF574Q6ZN55 896 aaPredicted RBP12.83□□□□□ -0.35
CLK4-210ENST00000522136 SPATA21Q7Z572 469 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 PLXDC1Q8IUK5 500 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.83□□□□□ -0.35
CLK4-210ENST00000522136 LAS2Q8IYD9 372 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 KRT78Q8N1N4 520 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 AFAP1L2Q8N4X5 818 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 OR2T11Q8NH01 316 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 HUS1BQ8NHY5 278 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 BAHD1Q8TBE0 780 aaPredicted RBP12.83□□□□□ -0.35
CLK4-210ENST00000522136 USP7Q93009 1102 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 FAR2Q96K12 515 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 PRM3Q9NNZ6 103 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 FAM60AQ9NP50 221 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 VTI1BQ9UEU0 232 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 GIMAP2Q9UG22 337 aa12.83□□□□□ -0.35
CLK4-210ENST00000522136 TRBC2A0A5B9 178 aa12.83□□□□□ -0.36
CLK4-210ENST00000522136 SDHDO14521 159 aa12.83□□□□□ -0.36
CLK4-210ENST00000522136 HGSO14964 777 aaPredicted RBP12.83□□□□□ -0.36
CLK4-210ENST00000522136 RASSF9O75901 435 aa12.83□□□□□ -0.36
CLK4-210ENST00000522136 CHEK2O96017 543 aa12.83□□□□□ -0.36
CLK4-210ENST00000522136 C9P02748 559 aa12.83□□□□□ -0.36
CLK4-210ENST00000522136 ACP1P24666 158 aa12.83□□□□□ -0.36
CLK4-210ENST00000522136 HRH2P25021 359 aa12.83□□□□□ -0.36
CLK4-210ENST00000522136 HMGCS1Q01581 520 aa12.83□□□□□ -0.36
CLK4-210ENST00000522136 IFT88Q13099 833 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms